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The map label for this gene is ydeQ [H]

Identifier: 209396169

GI number: 209396169

Start: 2022666

End: 2023580

Strand: Reverse

Name: ydeQ [H]

Synonym: ECH74115_2115

Alternate gene names: 209396169

Gene position: 2023580-2022666 (Counterclockwise)

Preceding gene: 209400755

Following gene: 209400692

Centisome position: 36.32

GC content: 44.59

Gene sequence:

>915_bases
ATGGGTAAAACAATCAGTATAAAGGTCCTGTTCGGTATTTATCTTCTATTAATGGCAGGCAAAGTTTTTGCCTTCAGTTG
TAATGTCGATGGCGGGTCAAGTATTGGAGCTGGTACAACCTCTGTTTATGTTAATCTCGACCCTGTAATACAGCCGGGCC
AGAATCTGGTTGTAGACTTGTCTCAGCATATAAGTTGCTGGAATGATTACGGCGGCTGGTACGACACTGATCATATAAAC
CTGGTACAAGGCTCAGCTTTCGCAGGCTCTCTACAGTCATATAAAGGATCGCTGTACTGGAATAATGTGACCTACCCCTT
CCCGTTGACGACAAATACCAACGTATTGGATATTGGTGATAAGACACCGATGCCATTACCGTTAAAACTCTATATTACCC
CAGTCGGGGCGGCCGGTGGAGTTGTCATAAAAGCCGGGGAAGTTATTGCCCGTATTCATATGTATAAAATTGCCACGTTA
GGAAGCGGAAATCCGCGTAATTTTACGTGGAATATTATTTCAAATAACAGTGTTGTTATGCCAACAGGCGGCTGCACTGT
TGATAGTCGTAATGTCACCGTGAATCTCCCGGACTTTCCTGGAAGCGCAGAAATCCCCCTTGGCGTATATTGCTCAAGCG
AACAAAAGCTCTCATTTTATCTTTCGGGTACTACCACTGACAGTGCTAGACAAGTGTTTGCTAACACAGCACCAGATGCA
ACAAAAGCATCGGGAGTGGGTGTCTCTCTGATGCGTAATGGAAAAATACTGGCTACGGGAGAAAATGTCTCCCTGGGGAC
AGTAAATAAAAGCAAAGTACCTCTGGGTTTAAGCGCAACCTATGGACAAACAGGGAACAAAGTTTCAGCCGGAACCGTCC
AGTCAGTCATTGGTGTCACTTTTATCTATGAATAA

Upstream 100 bases:

>100_bases
CGATCGAGGCGCTAATCAATGTGATCTACACCTGGCAATAACGTCGATTCGATTTTCTTAGCCTTCTTTTTAAATCAATT
TTTTAACCTTAGGATATATC

Downstream 100 bases:

>100_bases
TTGTGATTTTGACCTTAGTCTATGCGCTCCATTCACGAAAATTGCGCGGATAATTATTTTGTGAAGGCTATTATCCTACA
CTTGTAAGAAAATCCGCGCA

Product: protein FimH homolog

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MGKTISIKVLFGIYLLLMAGKVFAFSCNVDGGSSIGAGTTSVYVNLDPVIQPGQNLVVDLSQHISCWNDYGGWYDTDHIN
LVQGSAFAGSLQSYKGSLYWNNVTYPFPLTTNTNVLDIGDKTPMPLPLKLYITPVGAAGGVVIKAGEVIARIHMYKIATL
GSGNPRNFTWNIISNNSVVMPTGGCTVDSRNVTVNLPDFPGSAEIPLGVYCSSEQKLSFYLSGTTTDSARQVFANTAPDA
TKASGVGVSLMRNGKILATGENVSLGTVNKSKVPLGLSATYGQTGNKVSAGTVQSVIGVTFIYE

Sequences:

>Translated_304_residues
MGKTISIKVLFGIYLLLMAGKVFAFSCNVDGGSSIGAGTTSVYVNLDPVIQPGQNLVVDLSQHISCWNDYGGWYDTDHIN
LVQGSAFAGSLQSYKGSLYWNNVTYPFPLTTNTNVLDIGDKTPMPLPLKLYITPVGAAGGVVIKAGEVIARIHMYKIATL
GSGNPRNFTWNIISNNSVVMPTGGCTVDSRNVTVNLPDFPGSAEIPLGVYCSSEQKLSFYLSGTTTDSARQVFANTAPDA
TKASGVGVSLMRNGKILATGENVSLGTVNKSKVPLGLSATYGQTGNKVSAGTVQSVIGVTFIYE
>Mature_303_residues
GKTISIKVLFGIYLLLMAGKVFAFSCNVDGGSSIGAGTTSVYVNLDPVIQPGQNLVVDLSQHISCWNDYGGWYDTDHINL
VQGSAFAGSLQSYKGSLYWNNVTYPFPLTTNTNVLDIGDKTPMPLPLKLYITPVGAAGGVVIKAGEVIARIHMYKIATLG
SGNPRNFTWNIISNNSVVMPTGGCTVDSRNVTVNLPDFPGSAEIPLGVYCSSEQKLSFYLSGTTTDSARQVFANTAPDAT
KASGVGVSLMRNGKILATGENVSLGTVNKSKVPLGLSATYGQTGNKVSAGTVQSVIGVTFIYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1787779, Length=304, Percent_Identity=98.3552631578947, Blast_Score=607, Evalue=1e-175,
Organism=Escherichia coli, GI1790775, Length=297, Percent_Identity=48.1481481481481, Blast_Score=266, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779
- InterPro:   IPR015243 [H]

Pfam domain/function: PF00419 Fimbrial; PF09160 FimH_man-bind [H]

EC number: NA

Molecular weight: Translated: 32042; Mature: 31911

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKTISIKVLFGIYLLLMAGKVFAFSCNVDGGSSIGAGTTSVYVNLDPVIQPGQNLVVDL
CCCEEEEEHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEE
SQHISCWNDYGGWYDTDHINLVQGSAFAGSLQSYKGSLYWNNVTYPFPLTTNTNVLDIGD
HHHHHHHHCCCCEECCCEEEEEECCCCCCCHHHCCCEEEECCEEEEEECCCCCCEEECCC
KTPMPLPLKLYITPVGAAGGVVIKAGEVIARIHMYKIATLGSGNPRNFTWNIISNNSVVM
CCCCCEEEEEEEEEECCCCCEEEECCCEEEEEEEEEEEEECCCCCCCEEEEEECCCEEEE
PTGGCTVDSRNVTVNLPDFPGSAEIPLGVYCSSEQKLSFYLSGTTTDSARQVFANTAPDA
ECCCCEEECCEEEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHCCCCCC
TKASGVGVSLMRNGKILATGENVSLGTVNKSKVPLGLSATYGQTGNKVSAGTVQSVIGVT
CCCCCCEEEEEECCEEEEECCCEEEEECCCCCCCEEEEECCCCCCCEEECCHHHHEEEEE
FIYE
EEEC
>Mature Secondary Structure 
GKTISIKVLFGIYLLLMAGKVFAFSCNVDGGSSIGAGTTSVYVNLDPVIQPGQNLVVDL
CCEEEEEHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEE
SQHISCWNDYGGWYDTDHINLVQGSAFAGSLQSYKGSLYWNNVTYPFPLTTNTNVLDIGD
HHHHHHHHCCCCEECCCEEEEEECCCCCCCHHHCCCEEEECCEEEEEECCCCCCEEECCC
KTPMPLPLKLYITPVGAAGGVVIKAGEVIARIHMYKIATLGSGNPRNFTWNIISNNSVVM
CCCCCEEEEEEEEEECCCCCEEEECCCEEEEEEEEEEEEECCCCCCCEEEEEECCCEEEE
PTGGCTVDSRNVTVNLPDFPGSAEIPLGVYCSSEQKLSFYLSGTTTDSARQVFANTAPDA
ECCCCEEECCEEEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHCCCCCC
TKASGVGVSLMRNGKILATGENVSLGTVNKSKVPLGLSATYGQTGNKVSAGTVQSVIGVT
CCCCCCEEEEEECCEEEEECCCEEEEECCCCCCCEEEEECCCCCCCEEECCHHHHEEEEE
FIYE
EEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]