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The map label for this gene is fimA [C]

Identifier: 209395888

GI number: 209395888

Start: 1289590

End: 1290150

Strand: Reverse

Name: fimA [C]

Synonym: ECH74115_1277

Alternate gene names: 209395888

Gene position: 1290150-1289590 (Counterclockwise)

Preceding gene: 209400097

Following gene: 209398909

Centisome position: 23.15

GC content: 51.16

Gene sequence:

>561_bases
ATGTTTTCTACTTTCAAAAAAGCAGCTCTGCTGGCAGCTATTGCATTACCTTTTTCAACTATGGCTGCGCCTACAGTCAC
TTTTCAGGGTGAAGTAACCGATCAGACCTGTTCCGTAAATATCAACGGTCAAACCAATTCAGTAGTATTGATGCCGACCG
TAGCCATGGCTGACTTCGGTGCAACTTTAGCTGATGGTCAGAGCGCAGGCCAGACGCCGTTTACGGTTTCTGTGTCTAAC
TGCCAGGCTCCAACTGGTGCAGATCAGGCAATCAACACCACCTTCCTGGGCTACGACGTTGACGCTAGCACGGGTGTTAT
GGGAAACCGTGATACCAGCAGCGATGCGGCGAAAGGCTTTGGCATTCAGTTAATGGATTCCAGCACTTCTGGTAACCCAG
TAACTCTGGCTGGCGCGACTAACGTACCGGGTCTGACCCTGAAAGTTGGCGATACCGAAGCCAGCTACGACTTCGGTGCG
CGTTACTTCGTTATCGATAGCGCTGCTGCCACTGCCGGTAAAATTACCGCTGTCGCAGAATACACCCTGAGCTACCTCTA
A

Upstream 100 bases:

>100_bases
TATACAGTTAAGGAGATTTACCGGTTTTAAAAACGTCAGATTGTATCAATTGCATTAATTAACTCGTTCTATATTAACTC
TAAATTTCAAGGATATTAAT

Downstream 100 bases:

>100_bases
TTAATCTACTGGCTGGCAGTAAATGCCAGCCAGTATTTCTTCGCACAATTAATAGTGATTTTTCATGGACATGGAAAAGA
TAAGAATGAACATTTTTGCA

Product: fimbrial protein

Products: NA

Alternate protein names: Fimbrial Protein Domain-Containing Protein; Fimbriae; Minor Fimbrial Subunit HifD; Fimbrial Subunit MrkA; Fimbrial; F17a-A

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MFSTFKKAALLAAIALPFSTMAAPTVTFQGEVTDQTCSVNINGQTNSVVLMPTVAMADFGATLADGQSAGQTPFTVSVSN
CQAPTGADQAINTTFLGYDVDASTGVMGNRDTSSDAAKGFGIQLMDSSTSGNPVTLAGATNVPGLTLKVGDTEASYDFGA
RYFVIDSAAATAGKITAVAEYTLSYL

Sequences:

>Translated_186_residues
MFSTFKKAALLAAIALPFSTMAAPTVTFQGEVTDQTCSVNINGQTNSVVLMPTVAMADFGATLADGQSAGQTPFTVSVSN
CQAPTGADQAINTTFLGYDVDASTGVMGNRDTSSDAAKGFGIQLMDSSTSGNPVTLAGATNVPGLTLKVGDTEASYDFGA
RYFVIDSAAATAGKITAVAEYTLSYL
>Mature_186_residues
MFSTFKKAALLAAIALPFSTMAAPTVTFQGEVTDQTCSVNINGQTNSVVLMPTVAMADFGATLADGQSAGQTPFTVSVSN
CQAPTGADQAINTTFLGYDVDASTGVMGNRDTSSDAAKGFGIQLMDSSTSGNPVTLAGATNVPGLTLKVGDTEASYDFGA
RYFVIDSAAATAGKITAVAEYTLSYL

Specific function: Fimbriae (Also Called Pili), Polar Filaments Radiating From The Surface Of The Bacterium To A Length Of 0.5-1.5 Micrometers And Numbering 100-300 Per Cell, Enable Bacteria To Colonize The Epithelium Of Specific Host Organs. [C]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbria [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18942; Mature: 18942

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSTFKKAALLAAIALPFSTMAAPTVTFQGEVTDQTCSVNINGQTNSVVLMPTVAMADFG
CCCHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEEEEHHCC
ATLADGQSAGQTPFTVSVSNCQAPTGADQAINTTFLGYDVDASTGVMGNRDTSSDAAKGF
CEECCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC
GIQLMDSSTSGNPVTLAGATNVPGLTLKVGDTEASYDFGARYFVIDSAAATAGKITAVAE
CEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEE
YTLSYL
EEECCC
>Mature Secondary Structure
MFSTFKKAALLAAIALPFSTMAAPTVTFQGEVTDQTCSVNINGQTNSVVLMPTVAMADFG
CCCHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEEEEHHCC
ATLADGQSAGQTPFTVSVSNCQAPTGADQAINTTFLGYDVDASTGVMGNRDTSSDAAKGF
CEECCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC
GIQLMDSSTSGNPVTLAGATNVPGLTLKVGDTEASYDFGARYFVIDSAAATAGKITAVAE
CEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEE
YTLSYL
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA