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The map label for this gene is yjiK

Identifier: 209395762

GI number: 209395762

Start: 5496805

End: 5497647

Strand: Reverse

Name: yjiK

Synonym: ECH74115_5845

Alternate gene names: 209395762

Gene position: 5497647-5496805 (Counterclockwise)

Preceding gene: 209399931

Following gene: 209396495

Centisome position: 98.66

GC content: 44.48

Gene sequence:

>843_bases
TTGAAAAAGCGCATCACCTTTATCGTTTTTCTTTGCGCCATCGTGGCGGCAAGCCTGTTTTTTGTGCAATCCTGCGTCCG
TAAAAGCCAGCATGTCGCAGGGTTTCAGAATTATCAGGCCACTATCGATGGTAAAGAGATTACAGGAGTAACTAAAAATA
TCTCCTCACTGACCTGGTCAGCGCAGAGCAATACCTTATTTAGCACTATCAACAAACCTGCAACCATCGTTGAAATGACG
ACCGAGGGCGACTTGATCCGCACCATTCCGCTCGATTTTGTTAAGGATCTCGAGACGATTGAATACATTGGTGATAATAA
ATTTGTCATCAGTGATGAACGTGACTACGCCATTTATGTGATTTCACTTAACGCTGACTCGGAAGTGAGCATCCTCAAAA
AAATTAAAATCCCATTGCAGGAAACACCAACTAACTGTGGCTTTGAAGGGCTGGCTTACTCCTCTCAGGACCATACCTTC
TGGTTTTTTAAAGAGAAAAATCCGATAGAGGTCTACAAAGTAACCGGGCTATTGCGTAGCGATGAGTTGCATATCAGCAA
AGATAAAACGTTGCAGCGTCAGTTTACTTTAGACGATGTTTCTGGCGCGGAATTTAACCCACAGAAAAATACGTTGCTGG
TGTTGTCACATGAGTCACGCGCCCTGCAGGAAGTGACCGTGAGAGGTGACGTGATCGGCGAAATGTCGTTAACCAAAGGT
AAGTATGGCCTTTCACACAACATCAAGCAGGCGGAAGGGATAGCGATGGATGATAGCGGCAACATCTATATCGTTGGCGA
ACCGAATCTTTTTTATCGCTTTACGTCGACAAAATCACGATAA

Upstream 100 bases:

>100_bases
TTTCATCGCCCGCGTTAAGAATTCATTAAGCTTCATCCGTATACTCCTTATCTGTCGCACTGAATTTGACGAGAAAAAAG
CAATAATAAGGAGCAATAAG

Downstream 100 bases:

>100_bases
CAGTCTGGCAGGTTCTCCTTTTTTGTTATTAACTTGTTAACTCAAAATAATACAAACCAGGCAGAACATGAATTCGACAT
CGCATCCCGTAGAACGTTTT

Product: SdiA-regulated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKKRITFIVFLCAIVAASLFFVQSCVRKSQHVAGFQNYQATIDGKEITGVTKNISSLTWSAQSNTLFSTINKPATIVEMT
TEGDLIRTIPLDFVKDLETIEYIGDNKFVISDERDYAIYVISLNADSEVSILKKIKIPLQETPTNCGFEGLAYSSQDHTF
WFFKEKNPIEVYKVTGLLRSDELHISKDKTLQRQFTLDDVSGAEFNPQKNTLLVLSHESRALQEVTVRGDVIGEMSLTKG
KYGLSHNIKQAEGIAMDDSGNIYIVGEPNLFYRFTSTKSR

Sequences:

>Translated_280_residues
MKKRITFIVFLCAIVAASLFFVQSCVRKSQHVAGFQNYQATIDGKEITGVTKNISSLTWSAQSNTLFSTINKPATIVEMT
TEGDLIRTIPLDFVKDLETIEYIGDNKFVISDERDYAIYVISLNADSEVSILKKIKIPLQETPTNCGFEGLAYSSQDHTF
WFFKEKNPIEVYKVTGLLRSDELHISKDKTLQRQFTLDDVSGAEFNPQKNTLLVLSHESRALQEVTVRGDVIGEMSLTKG
KYGLSHNIKQAEGIAMDDSGNIYIVGEPNLFYRFTSTKSR
>Mature_280_residues
MKKRITFIVFLCAIVAASLFFVQSCVRKSQHVAGFQNYQATIDGKEITGVTKNISSLTWSAQSNTLFSTINKPATIVEMT
TEGDLIRTIPLDFVKDLETIEYIGDNKFVISDERDYAIYVISLNADSEVSILKKIKIPLQETPTNCGFEGLAYSSQDHTF
WFFKEKNPIEVYKVTGLLRSDELHISKDKTLQRQFTLDDVSGAEFNPQKNTLLVLSHESRALQEVTVRGDVIGEMSLTKG
KYGLSHNIKQAEGIAMDDSGNIYIVGEPNLFYRFTSTKSR

Specific function: Unknown

COG id: COG3204

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yjiK family

Homologues:

Organism=Escherichia coli, GI145693216, Length=280, Percent_Identity=83.2142857142857, Blast_Score=484, Evalue=1e-138,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJIK_ECO57 (Q8XB94)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   A86132
- PIR:   F91290
- RefSeq:   NP_290951.1
- RefSeq:   NP_313321.1
- ProteinModelPortal:   Q8XB94
- EnsemblBacteria:   EBESCT00000028341
- EnsemblBacteria:   EBESCT00000058435
- GeneID:   913645
- GeneID:   959718
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z5934
- KEGG:   ecs:ECs5294
- GeneTree:   EBGT00050000011739
- HOGENOM:   HBG467533
- OMA:   AKERDPM
- ProtClustDB:   CLSK880899
- BioCyc:   ECOL83334:ECS5294-MONOMER
- InterPro:   IPR011042
- InterPro:   IPR009722
- Gene3D:   G3DSA:2.120.10.30

Pfam domain/function: PF06977 SdiA-regulated

EC number: NA

Molecular weight: Translated: 31492; Mature: 31492

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xee9ad78)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRITFIVFLCAIVAASLFFVQSCVRKSQHVAGFQNYQATIDGKEITGVTKNISSLTWS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECHHCCCCCEEEC
AQSNTLFSTINKPATIVEMTTEGDLIRTIPLDFVKDLETIEYIGDNKFVISDERDYAIYV
CCCCEEEECCCCCEEEEEEECCCCEEEEECHHHHHHHHHHEEECCCEEEEECCCCEEEEE
ISLNADSEVSILKKIKIPLQETPTNCGFEGLAYSSQDHTFWFFKEKNPIEVYKVTGLLRS
EEECCCCCCEEHHHCCCCHHCCCCCCCCCCCEECCCCCEEEEEECCCCEEEEEEEEEEEC
DELHISKDKTLQRQFTLDDVSGAEFNPQKNTLLVLSHESRALQEVTVRGDVIGEMSLTKG
CCEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHEEECCCEEEEEEECCC
KYGLSHNIKQAEGIAMDDSGNIYIVGEPNLFYRFTSTKSR
CCCCCCCCCHHCCEEEECCCCEEEEECCCEEEEECCCCCH
>Mature Secondary Structure
MKKRITFIVFLCAIVAASLFFVQSCVRKSQHVAGFQNYQATIDGKEITGVTKNISSLTWS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECHHCCCCCEEEC
AQSNTLFSTINKPATIVEMTTEGDLIRTIPLDFVKDLETIEYIGDNKFVISDERDYAIYV
CCCCEEEECCCCCEEEEEEECCCCEEEEECHHHHHHHHHHEEECCCEEEEECCCCEEEEE
ISLNADSEVSILKKIKIPLQETPTNCGFEGLAYSSQDHTFWFFKEKNPIEVYKVTGLLRS
EEECCCCCCEEHHHCCCCHHCCCCCCCCCCCEECCCCCEEEEEECCCCEEEEEEEEEEEC
DELHISKDKTLQRQFTLDDVSGAEFNPQKNTLLVLSHESRALQEVTVRGDVIGEMSLTKG
CCEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHEEECCCEEEEEEECCC
KYGLSHNIKQAEGIAMDDSGNIYIVGEPNLFYRFTSTKSR
CCCCCCCCCHHCCEEEECCCCEEEEECCCEEEEECCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796