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The map label for this gene is yjcF [C]

Identifier: 209399931

GI number: 209399931

Start: 5497913

End: 5500096

Strand: Reverse

Name: yjcF [C]

Synonym: ECH74115_5846

Alternate gene names: 209399931

Gene position: 5500096-5497913 (Counterclockwise)

Preceding gene: 209400337

Following gene: 209395762

Centisome position: 98.71

GC content: 35.67

Gene sequence:

>2184_bases
ATGGGCTCCCTATTTAACATATACAAAGATATTTTCCCAACACTCGGCATGTATTCGGGACTAAAAGCTTGCCATGAAAA
AAACAACCTACCATTTGATATTAACACGGAAATTGAAACCATACAAAAACAAATTAATTATGATATAAATCATTTGAATG
ATGGTTTGATTAAGCGTGTACTGAATCTTTTTATTCACCTTATCTCTAATCCCGACAATCTTGAATTAACCTTAAATAGA
TATTCATCAACAACAGAACAAATCATCGGCAGAACCAAAAGAAATGGTTTACATGAGTTTGACGATGGCGATCTAAAAAT
AATATTTAATCGACAAGATGATAATGAAAGCGTATTAACTGTTAAAGATAAAGATAAAGATAAAGATATAAGTCATCACT
GCAATGTTAAAACCGAGCAACTGCAGCAGTTTATTAAAATAATGGAACAAAAAGCGCAACTACCAATCTATATTGACAAG
AACAATTTGAAAGAGAGTATTTTCTCTGTTTTGCACAATGACCCACAACAAGTAGATAAAGATCAACACCTTCCCTGTGA
AAAGTTTTTAAAACATGCCTGCAAAAGTTCAAATTCATTTGAAGTGAAATTAGATGCCACTCATCAATATCAACACCTGA
ATAACTTCATGATTTCTTTGGACCCAGTAGAAAATCAATTAACCATACGGGATAACAATAACAAGACTGAAACTTTCTCG
TTTACAAACTTACAATGGGAAAATTTGCTGCAATACTACAAAGAAAACCACCAGCAGCCAAATATAGCAGGATCACGAAA
TCTCACGGATAATATAGATAAAATTAAAAATACAATATCCACCTCTGAAATTATTGAATGCGCCTCTCCTGAAATAAGAA
GTAGCGTCCTGAACGATCTTTATAGCATTGCTAATTTCCTCCCGGACAATAATCTGACCCCAAATGAGAGCTGGAAAAGA
TTTTGTGAGACATGCGAGCGCTTTTACGTTGCTCAGAAGAGTATCACTGGAGATAAGAGTGAACGTCTTACGCGAAAACT
CTCTATCTCTGATGCAGGAATTACAATGACCTTCAAGATAGGTGATGTTGTCATCAATACTATTAGCACTGCTATTCCTG
AAGATGCAACGGGTCAACGGTGTATCGAAGGGTTGAATTTAGCAGAGATGGATTTAACCGACATAGACTTGTCGAAAATG
GCGCTAAGGAATGTCAATTTTAATGGCAGCATTCTTAGAAATGCCAAGTTCTCCGGTACGATCTGTGAAGGCGTGGATTT
TACCGATTGTGATCTGCGTAATGCAGAATTCGAAAATGCCTCATTAGAAAATAATGATTTTCGTAAAGTTCGCCACTTGA
CTTATGTAAATTTCAAAAACGCAAATCTACGAAACAGTAACTTCAACGGAAAAGTTCTCACTGGCGTAACCTTTACTGGA
AGTGACCTTAGTAACGCGTATCTTGAACACATAGATTTCACAACCGTGATTCTATATGAAACATCTAAAATACCTGGAAT
ACCTGGAACACCTCAAATACCGGGAACACCTAAAGTAATTCTTACTGGCGCAATACTAAATTATTCCGATCTATCGGGAA
AAGATCTTTCAGAATATAATCTTACTGGTATTCTCTGCATGTATACCAACTTTTCAAACGCTAATTTAACAAATTGTAAA
ATCTCTAATGCAAACTTTTCGAATGCAAAATTCTACAATACTAATTGTACTGGTGCAAATTGTTCGAATATCCTATTTGA
CTACGCATGGTTTGACAATACAATATTTATAAAAACGCTTTTTAAAAATACCTGTTTTTACAATGTCAGAGCGAAAAATG
TCTATCTTGAGGGAGCATATCTGAACAATGATAATATCGTGAATCAAGCCAATAACAGTACCGAGAAACAATCCATTGAC
AGTACCGATAAACAGGCCAATGACAGTACGGTGCAACAATCCATTGACAGTACGGTGCAACAAGCCAATGACAGTACCGA
TAAACAAGCCAATGACAATATCGATAAACAGGTCAATGACAGTACCGATAAACAAGCCAAGAACAGTACCGAGCAACAGG
ACAGTAACAGTTTTAATCAAGCCCGTTTAAAGAAAGAAGTGAATAGGAGATTTTCCATTCCGGGTTTAACGTCTTATCAG
CCAACATATATAGTTGAAGAATAG

Upstream 100 bases:

>100_bases
TTGTAATGTTAAAAGATAAGTTTCTGTGCAAAGCTTATCTTTCCCCACCCCCTGATTATTTTAGATTTAGAAGAATATTT
CACAGTTCAAGGATAAAAAT

Downstream 100 bases:

>100_bases
TTCATTAATCACCCAAACAGAGTGGGTATGGCAGACGATATAGATTAACATTTAAACGTTAACCGCCTCATCTATCATTC
ATAGATGAGGCGCATTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 727; Mature: 726

Protein sequence:

>727_residues
MGSLFNIYKDIFPTLGMYSGLKACHEKNNLPFDINTEIETIQKQINYDINHLNDGLIKRVLNLFIHLISNPDNLELTLNR
YSSTTEQIIGRTKRNGLHEFDDGDLKIIFNRQDDNESVLTVKDKDKDKDISHHCNVKTEQLQQFIKIMEQKAQLPIYIDK
NNLKESIFSVLHNDPQQVDKDQHLPCEKFLKHACKSSNSFEVKLDATHQYQHLNNFMISLDPVENQLTIRDNNNKTETFS
FTNLQWENLLQYYKENHQQPNIAGSRNLTDNIDKIKNTISTSEIIECASPEIRSSVLNDLYSIANFLPDNNLTPNESWKR
FCETCERFYVAQKSITGDKSERLTRKLSISDAGITMTFKIGDVVINTISTAIPEDATGQRCIEGLNLAEMDLTDIDLSKM
ALRNVNFNGSILRNAKFSGTICEGVDFTDCDLRNAEFENASLENNDFRKVRHLTYVNFKNANLRNSNFNGKVLTGVTFTG
SDLSNAYLEHIDFTTVILYETSKIPGIPGTPQIPGTPKVILTGAILNYSDLSGKDLSEYNLTGILCMYTNFSNANLTNCK
ISNANFSNAKFYNTNCTGANCSNILFDYAWFDNTIFIKTLFKNTCFYNVRAKNVYLEGAYLNNDNIVNQANNSTEKQSID
STDKQANDSTVQQSIDSTVQQANDSTDKQANDNIDKQVNDSTDKQAKNSTEQQDSNSFNQARLKKEVNRRFSIPGLTSYQ
PTYIVEE

Sequences:

>Translated_727_residues
MGSLFNIYKDIFPTLGMYSGLKACHEKNNLPFDINTEIETIQKQINYDINHLNDGLIKRVLNLFIHLISNPDNLELTLNR
YSSTTEQIIGRTKRNGLHEFDDGDLKIIFNRQDDNESVLTVKDKDKDKDISHHCNVKTEQLQQFIKIMEQKAQLPIYIDK
NNLKESIFSVLHNDPQQVDKDQHLPCEKFLKHACKSSNSFEVKLDATHQYQHLNNFMISLDPVENQLTIRDNNNKTETFS
FTNLQWENLLQYYKENHQQPNIAGSRNLTDNIDKIKNTISTSEIIECASPEIRSSVLNDLYSIANFLPDNNLTPNESWKR
FCETCERFYVAQKSITGDKSERLTRKLSISDAGITMTFKIGDVVINTISTAIPEDATGQRCIEGLNLAEMDLTDIDLSKM
ALRNVNFNGSILRNAKFSGTICEGVDFTDCDLRNAEFENASLENNDFRKVRHLTYVNFKNANLRNSNFNGKVLTGVTFTG
SDLSNAYLEHIDFTTVILYETSKIPGIPGTPQIPGTPKVILTGAILNYSDLSGKDLSEYNLTGILCMYTNFSNANLTNCK
ISNANFSNAKFYNTNCTGANCSNILFDYAWFDNTIFIKTLFKNTCFYNVRAKNVYLEGAYLNNDNIVNQANNSTEKQSID
STDKQANDSTVQQSIDSTVQQANDSTDKQANDNIDKQVNDSTDKQAKNSTEQQDSNSFNQARLKKEVNRRFSIPGLTSYQ
PTYIVEE
>Mature_726_residues
GSLFNIYKDIFPTLGMYSGLKACHEKNNLPFDINTEIETIQKQINYDINHLNDGLIKRVLNLFIHLISNPDNLELTLNRY
SSTTEQIIGRTKRNGLHEFDDGDLKIIFNRQDDNESVLTVKDKDKDKDISHHCNVKTEQLQQFIKIMEQKAQLPIYIDKN
NLKESIFSVLHNDPQQVDKDQHLPCEKFLKHACKSSNSFEVKLDATHQYQHLNNFMISLDPVENQLTIRDNNNKTETFSF
TNLQWENLLQYYKENHQQPNIAGSRNLTDNIDKIKNTISTSEIIECASPEIRSSVLNDLYSIANFLPDNNLTPNESWKRF
CETCERFYVAQKSITGDKSERLTRKLSISDAGITMTFKIGDVVINTISTAIPEDATGQRCIEGLNLAEMDLTDIDLSKMA
LRNVNFNGSILRNAKFSGTICEGVDFTDCDLRNAEFENASLENNDFRKVRHLTYVNFKNANLRNSNFNGKVLTGVTFTGS
DLSNAYLEHIDFTTVILYETSKIPGIPGTPQIPGTPKVILTGAILNYSDLSGKDLSEYNLTGILCMYTNFSNANLTNCKI
SNANFSNAKFYNTNCTGANCSNILFDYAWFDNTIFIKTLFKNTCFYNVRAKNVYLEGAYLNNDNIVNQANNSTEKQSIDS
TDKQANDSTVQQSIDSTVQQANDSTDKQANDNIDKQVNDSTDKQAKNSTEQQDSNSFNQARLKKEVNRRFSIPGLTSYQP
TYIVEE

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 82587; Mature: 82456

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSLFNIYKDIFPTLGMYSGLKACHEKNNLPFDINTEIETIQKQINYDINHLNDGLIKRV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHCCCHHHCCHHHHHHH
LNLFIHLISNPDNLELTLNRYSSTTEQIIGRTKRNGLHEFDDGDLKIIFNRQDDNESVLT
HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEE
VKDKDKDKDISHHCNVKTEQLQQFIKIMEQKAQLPIYIDKNNLKESIFSVLHNDPQQVDK
EECCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCHHHCCC
DQHLPCEKFLKHACKSSNSFEVKLDATHQYQHLNNFMISLDPVENQLTIRDNNNKTETFS
CCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHCCEEEEECCCCCEEEEEECCCCEEEEE
FTNLQWENLLQYYKENHQQPNIAGSRNLTDNIDKIKNTISTSEIIECASPEIRSSVLNDL
ECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YSIANFLPDNNLTPNESWKRFCETCERFYVAQKSITGDKSERLTRKLSISDAGITMTFKI
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCEEEEEEH
GDVVINTISTAIPEDATGQRCIEGLNLAEMDLTDIDLSKMALRNVNFNGSILRNAKFSGT
HHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCE
ICEGVDFTDCDLRNAEFENASLENNDFRKVRHLTYVNFKNANLRNSNFNGKVLTGVTFTG
EECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEECCCCCCCCCCCCEEEEEEEECC
SDLSNAYLEHIDFTTVILYETSKIPGIPGTPQIPGTPKVILTGAILNYSDLSGKDLSEYN
CCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
LTGILCMYTNFSNANLTNCKISNANFSNAKFYNTNCTGANCSNILFDYAWFDNTIFIKTL
CEEEEEEEEECCCCCCCEEEECCCCCCCCEEEECCCCCCCHHHHHEEEECCCCEEEEEEH
FKNTCFYNVRAKNVYLEGAYLNNDNIVNQANNSTEKQSIDSTDKQANDSTVQQSIDSTVQ
HCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHH
QANDSTDKQANDNIDKQVNDSTDKQAKNSTEQQDSNSFNQARLKKEVNRRFSIPGLTSYQ
HCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCCHHHHHHHHHHHHEECCCCCCCCC
PTYIVEE
CCEEECC
>Mature Secondary Structure 
GSLFNIYKDIFPTLGMYSGLKACHEKNNLPFDINTEIETIQKQINYDINHLNDGLIKRV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHCCCHHHCCHHHHHHH
LNLFIHLISNPDNLELTLNRYSSTTEQIIGRTKRNGLHEFDDGDLKIIFNRQDDNESVLT
HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEE
VKDKDKDKDISHHCNVKTEQLQQFIKIMEQKAQLPIYIDKNNLKESIFSVLHNDPQQVDK
EECCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCHHHCCC
DQHLPCEKFLKHACKSSNSFEVKLDATHQYQHLNNFMISLDPVENQLTIRDNNNKTETFS
CCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHCCEEEEECCCCCEEEEEECCCCEEEEE
FTNLQWENLLQYYKENHQQPNIAGSRNLTDNIDKIKNTISTSEIIECASPEIRSSVLNDL
ECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YSIANFLPDNNLTPNESWKRFCETCERFYVAQKSITGDKSERLTRKLSISDAGITMTFKI
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCEEEEEEH
GDVVINTISTAIPEDATGQRCIEGLNLAEMDLTDIDLSKMALRNVNFNGSILRNAKFSGT
HHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCE
ICEGVDFTDCDLRNAEFENASLENNDFRKVRHLTYVNFKNANLRNSNFNGKVLTGVTFTG
EECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEECCCCCCCCCCCCEEEEEEEECC
SDLSNAYLEHIDFTTVILYETSKIPGIPGTPQIPGTPKVILTGAILNYSDLSGKDLSEYN
CCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
LTGILCMYTNFSNANLTNCKISNANFSNAKFYNTNCTGANCSNILFDYAWFDNTIFIKTL
CEEEEEEEEECCCCCCCEEEECCCCCCCCEEEECCCCCCCHHHHHEEEECCCCEEEEEEH
FKNTCFYNVRAKNVYLEGAYLNNDNIVNQANNSTEKQSIDSTDKQANDSTVQQSIDSTVQ
HCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHH
QANDSTDKQANDNIDKQVNDSTDKQAKNSTEQQDSNSFNQARLKKEVNRRFSIPGLTSYQ
HCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCCHHHHHHHHHHHHEECCCCCCCCC
PTYIVEE
CCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]