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The map label for this gene is parB [H]

Identifier: 209696451

GI number: 209696451

Start: 3320846

End: 3321730

Strand: Reverse

Name: parB [H]

Synonym: VSAL_I3067

Alternate gene names: 209696451

Gene position: 3321730-3320846 (Counterclockwise)

Preceding gene: 209696452

Following gene: 209696450

Centisome position: 99.9

GC content: 38.87

Gene sequence:

>885_bases
ATGAGTAATAAACGTGGTTTAGGGAAAGGACTTGATGCGCTATTAGCGACAAGCTCATTAGCTCGTGAAAAGCAGACTGC
CGCTGTTCAAAGTGAGTCATTAGCAAAAAATGCTCAATTAATTGAGCTTGGTATTCATCAATTAACTCCTGGTCAGTATC
AACCGCGTAAGATCATGGAAAAAGAAGCCTTGGATGAACTTGCTTTGTCTATTCGTTCTCAAGGGATTATTCAACCTATC
GTTGTTCGTGAAATTGCACCATTACAATATGAAATTATTGCAGGTGAACGACGTTTTAGAGCGGCAAAACAAGCAGGGTT
AAAACACATTCCATGTGTTGTTAAAGTGGCTGAAGACAAAGCCGCTATTGCGATGGCTCTGATTGAAAATATTCAACGTG
AAGATTTAAATGCGATTGAAGAAGCTCAGGCGTTAGAACGTTTACAGAGAGAATTTGAATTAACGCATCAACAAATTTCG
GATGTGATAGGTAAATCTCGCACTACGGTGACTAACCTATTACGCTTGAACGCATTATCTGATGAAGTTAAAGCATTAGT
TGAAGCCAAATCTTTAGAAATGGGTCACGCCCGTGCTTTGTTAGCTTTAGAGTCTGAATTACAGATTGAATTAGCGCATA
TTGTCGTGAAAAAGAAGCTGACGGTTCGTCAAACTGAACAACAAGTAAAGAAATTATTAGCGCCAGTTGTTGAAGTGGAA
GTCAGTGAGAAAGACGCTCAAATTGAAGCTCTATCTACAAAACTGTCAGAGACTTTGGGTTCAAAAGTCGTTATTACGCA
AAATACGTCGGGTAAAGGTAAGTTAACGATTAGCTTTGACGAGGCTCACAAATTAGAACAACTGATTACAAAGCTAGAAA
GTTAA

Upstream 100 bases:

>100_bases
TATTATGATAAATACTCAAATGGTGCAAAAGCATATCTTGCTCTTGCCGGAGAGATAATCCGCCGTGACGAACTGGAAAA
AGAAAGGGAAACAAAAATTC

Downstream 100 bases:

>100_bases
ATGTGATATAAAGCAGTAGTTGACATTATTATTGTATTTTTCATCGTAAAACTTACTGTTTTGTTCTCATAAATGTAACT
ATTTGATGCTATTTGATTGC

Product: chromosome partitioning protein ParB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSNKRGLGKGLDALLATSSLAREKQTAAVQSESLAKNAQLIELGIHQLTPGQYQPRKIMEKEALDELALSIRSQGIIQPI
VVREIAPLQYEIIAGERRFRAAKQAGLKHIPCVVKVAEDKAAIAMALIENIQREDLNAIEEAQALERLQREFELTHQQIS
DVIGKSRTTVTNLLRLNALSDEVKALVEAKSLEMGHARALLALESELQIELAHIVVKKKLTVRQTEQQVKKLLAPVVEVE
VSEKDAQIEALSTKLSETLGSKVVITQNTSGKGKLTISFDEAHKLEQLITKLES

Sequences:

>Translated_294_residues
MSNKRGLGKGLDALLATSSLAREKQTAAVQSESLAKNAQLIELGIHQLTPGQYQPRKIMEKEALDELALSIRSQGIIQPI
VVREIAPLQYEIIAGERRFRAAKQAGLKHIPCVVKVAEDKAAIAMALIENIQREDLNAIEEAQALERLQREFELTHQQIS
DVIGKSRTTVTNLLRLNALSDEVKALVEAKSLEMGHARALLALESELQIELAHIVVKKKLTVRQTEQQVKKLLAPVVEVE
VSEKDAQIEALSTKLSETLGSKVVITQNTSGKGKLTISFDEAHKLEQLITKLES
>Mature_293_residues
SNKRGLGKGLDALLATSSLAREKQTAAVQSESLAKNAQLIELGIHQLTPGQYQPRKIMEKEALDELALSIRSQGIIQPIV
VREIAPLQYEIIAGERRFRAAKQAGLKHIPCVVKVAEDKAAIAMALIENIQREDLNAIEEAQALERLQREFELTHQQISD
VIGKSRTTVTNLLRLNALSDEVKALVEAKSLEMGHARALLALESELQIELAHIVVKKKLTVRQTEQQVKKLLAPVVEVEV
SEKDAQIEALSTKLSETLGSKVVITQNTSGKGKLTISFDEAHKLEQLITKLES

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32407; Mature: 32276

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKRGLGKGLDALLATSSLAREKQTAAVQSESLAKNAQLIELGIHQLTPGQYQPRKIME
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHH
KEALDELALSIRSQGIIQPIVVREIAPLQYEIIAGERRFRAAKQAGLKHIPCVVKVAEDK
HHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCEEEEECCCH
AAIAMALIENIQREDLNAIEEAQALERLQREFELTHQQISDVIGKSRTTVTNLLRLNALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
DEVKALVEAKSLEMGHARALLALESELQIELAHIVVKKKLTVRQTEQQVKKLLAPVVEVE
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
VSEKDAQIEALSTKLSETLGSKVVITQNTSGKGKLTISFDEAHKLEQLITKLES
ECCCHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNKRGLGKGLDALLATSSLAREKQTAAVQSESLAKNAQLIELGIHQLTPGQYQPRKIME
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHH
KEALDELALSIRSQGIIQPIVVREIAPLQYEIIAGERRFRAAKQAGLKHIPCVVKVAEDK
HHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCEEEEECCCH
AAIAMALIENIQREDLNAIEEAQALERLQREFELTHQQISDVIGKSRTTVTNLLRLNALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
DEVKALVEAKSLEMGHARALLALESELQIELAHIVVKKKLTVRQTEQQVKKLLAPVVEVE
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
VSEKDAQIEALSTKLSETLGSKVVITQNTSGKGKLTISFDEAHKLEQLITKLES
ECCCHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]