| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is atpI [H]
Identifier: 209696450
GI number: 209696450
Start: 3320268
End: 3320657
Strand: Reverse
Name: atpI [H]
Synonym: VSAL_I3066
Alternate gene names: 209696450
Gene position: 3320657-3320268 (Counterclockwise)
Preceding gene: 209696451
Following gene: 209696449
Centisome position: 99.86
GC content: 42.82
Gene sequence:
>390_bases ATGGTAGCTACGTTAGCTAGACCTGGCCGTTTGCTAGCCAAACGACTGATTATGATCCAGCTTAGCGTGGTTATTTTCAT GGCAGTAGGAATGAGCTTAGCCGTTAGTGCTAGCTGGGGGATCTCTGCGCTTATTGGGGGTGGCATTTATGTCATTGCTA ATGCGGTATTTGCAGGGTGTGCATTTATGTTCAGTGGAGCAAGAGCGGCTAAAAAGGTTGCTGTTTCTTTCTATGCTGGC GAAGTGTTAAAAATTCTTATAACAGTCGTCTTATTTTCTGTTGCCTACGTGTATATGGAGGTGGAACTTGTTCCCCTCAA ACTAACCTATTTGCTGGTACTGGGTATTAATATCTTTGCACCAGTTCTCTTTATTAACAACAGAAAATAG
Upstream 100 bases:
>100_bases CTATTTGATTGCATTCATATTAGTGCAACGTATAATTTTTGCAAAATCTTCACCTTGTGTTGATTTATATCAAGGTAAAG ATGCTTTTAAGGAAGAATAC
Downstream 100 bases:
>100_bases GAAAAGTTATGGCTGCGCCAGGCGAAGCGCTAACACAATCTGGATATATTGAGCATCACCTATCAAACCTGTCTCTTGCG AAACTAGGTATGGTTGCTGA
Product: F0F1 ATP synthase subunit I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MVATLARPGRLLAKRLIMIQLSVVIFMAVGMSLAVSASWGISALIGGGIYVIANAVFAGCAFMFSGARAAKKVAVSFYAG EVLKILITVVLFSVAYVYMEVELVPLKLTYLLVLGINIFAPVLFINNRK
Sequences:
>Translated_129_residues MVATLARPGRLLAKRLIMIQLSVVIFMAVGMSLAVSASWGISALIGGGIYVIANAVFAGCAFMFSGARAAKKVAVSFYAG EVLKILITVVLFSVAYVYMEVELVPLKLTYLLVLGINIFAPVLFINNRK >Mature_129_residues MVATLARPGRLLAKRLIMIQLSVVIFMAVGMSLAVSASWGISALIGGGIYVIANAVFAGCAFMFSGARAAKKVAVSFYAG EVLKILITVVLFSVAYVYMEVELVPLKLTYLLVLGINIFAPVLFINNRK
Specific function: A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex [H]
COG id: COG3312
COG function: function code C; F0F1-type ATP synthase, subunit I
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial AtpI family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005598 [H]
Pfam domain/function: PF03899 ATP_synt_I [H]
EC number: NA
Molecular weight: Translated: 13817; Mature: 13817
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVATLARPGRLLAKRLIMIQLSVVIFMAVGMSLAVSASWGISALIGGGIYVIANAVFAGC CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHCCHHHHHHHHHHHHH AFMFSGARAAKKVAVSFYAGEVLKILITVVLFSVAYVYMEVELVPLKLTYLLVLGINIFA HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHH PVLFINNRK HHHEEECCC >Mature Secondary Structure MVATLARPGRLLAKRLIMIQLSVVIFMAVGMSLAVSASWGISALIGGGIYVIANAVFAGC CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHCCHHHHHHHHHHHHH AFMFSGARAAKKVAVSFYAGEVLKILITVVLFSVAYVYMEVELVPLKLTYLLVLGINIFA HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHH PVLFINNRK HHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2529481 [H]