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The map label for this gene is yhgA [C]

Identifier: 209696432

GI number: 209696432

Start: 3296797

End: 3297645

Strand: Reverse

Name: yhgA [C]

Synonym: VSAL_I3046

Alternate gene names: 209696432

Gene position: 3297645-3296797 (Counterclockwise)

Preceding gene: 209696436

Following gene: 209696397

Centisome position: 99.17

GC content: 38.87

Gene sequence:

>849_bases
ATGTTGGAAATACACTTACCAACATATCTGAAAACGTTATGCGACTTATCAACATTGAAACTGGAATCAGGTTCTTTTTT
AGAAGACGACTTACGTCCGTATTATTCAGACGTGCTCTACTCAATGAAAACAGAATGTGGTGACGGCTATATTTATGCTC
TTATTGAGCACCAAAGCAGCCCTGACGAGCACATGGCCTTTCGTATGTTCAGATATGCTATTGCAGCCATGCAAAAACAT
CTTGATGCTGGAAACAAAGAATTGCCTTTAGTCGTTCCACTGCTATTCTATCATGGTAAAACATCACCATATCCATACAG
CATGAATTGGTTAGATTGTTTTACTAAACCAGAAATGGCGAAAGCACTCTATAACAATGATTTTCCATTAGTAGATGTTA
CTGTAATGGATGACAGTGCGATAATGCAGCACAAGCGCATTGCACTATTAGAGCTCGTCCAGAAACACATTTACCAAAAA
GACATCAATGATATTCTTGAATCGTTAGCCATCTTATTATTAAATGACTACCATACAGACAGCCAAGTCCGAACCCTGAT
TGAATACTTAGTAACGGTAGGGGAAACTCAGAACGTGAATGCGTTATTGGAAGAGTTGGCGCATCAAGTACCAAAACATG
AGGGCACACTAATGACAATAGCAGAGCAACTAATTCAGCAAGGAAAACAAGAAGGACTTTTACAAGGCGAACAAAAAGGA
CTTCAACAAGGCCGTCAAGATACATTGAAAGAAATGGCACGTAATTTACTGCAATCAGGCGTAGATAAAGCCGCAATCAT
GAAAGCAACAGGATTTAGCTCTCGTGAATTAGAACTTATTTCTCATTAA

Upstream 100 bases:

>100_bases
GTCAGTAGAGTGGATCACTTTTCATGAGTAAGAAAAACACAACAACGCCCCATGATGGGTTGTTTAAAGCCTTTTTAACA
ACGCCTGAACCGCTAAAGAT

Downstream 100 bases:

>100_bases
TACATTCCGTCATAATGTAATAAGAGAGCTAATAAGCTCGAATTCTGCACCTAGATCATAAGCTTTCTTTACTTCAACGC
TCTGAAAAGCACTCTTTTCA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MLEIHLPTYLKTLCDLSTLKLESGSFLEDDLRPYYSDVLYSMKTECGDGYIYALIEHQSSPDEHMAFRMFRYAIAAMQKH
LDAGNKELPLVVPLLFYHGKTSPYPYSMNWLDCFTKPEMAKALYNNDFPLVDVTVMDDSAIMQHKRIALLELVQKHIYQK
DINDILESLAILLLNDYHTDSQVRTLIEYLVTVGETQNVNALLEELAHQVPKHEGTLMTIAEQLIQQGKQEGLLQGEQKG
LQQGRQDTLKEMARNLLQSGVDKAAIMKATGFSSRELELISH

Sequences:

>Translated_282_residues
MLEIHLPTYLKTLCDLSTLKLESGSFLEDDLRPYYSDVLYSMKTECGDGYIYALIEHQSSPDEHMAFRMFRYAIAAMQKH
LDAGNKELPLVVPLLFYHGKTSPYPYSMNWLDCFTKPEMAKALYNNDFPLVDVTVMDDSAIMQHKRIALLELVQKHIYQK
DINDILESLAILLLNDYHTDSQVRTLIEYLVTVGETQNVNALLEELAHQVPKHEGTLMTIAEQLIQQGKQEGLLQGEQKG
LQQGRQDTLKEMARNLLQSGVDKAAIMKATGFSSRELELISH
>Mature_282_residues
MLEIHLPTYLKTLCDLSTLKLESGSFLEDDLRPYYSDVLYSMKTECGDGYIYALIEHQSSPDEHMAFRMFRYAIAAMQKH
LDAGNKELPLVVPLLFYHGKTSPYPYSMNWLDCFTKPEMAKALYNNDFPLVDVTVMDDSAIMQHKRIALLELVQKHIYQK
DINDILESLAILLLNDYHTDSQVRTLIEYLVTVGETQNVNALLEELAHQVPKHEGTLMTIAEQLIQQGKQEGLLQGEQKG
LQQGRQDTLKEMARNLLQSGVDKAAIMKATGFSSRELELISH

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1789816, Length=281, Percent_Identity=52.6690391459075, Blast_Score=300, Evalue=9e-83,
Organism=Escherichia coli, GI1788643, Length=282, Percent_Identity=47.8723404255319, Blast_Score=282, Evalue=1e-77,
Organism=Escherichia coli, GI1788577, Length=277, Percent_Identity=48.3754512635379, Blast_Score=280, Evalue=1e-76,
Organism=Escherichia coli, GI1786324, Length=279, Percent_Identity=44.4444444444444, Blast_Score=251, Evalue=3e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 32154; Mature: 32154

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEIHLPTYLKTLCDLSTLKLESGSFLEDDLRPYYSDVLYSMKTECGDGYIYALIEHQSS
CEEEECHHHHHHHHCHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
PDEHMAFRMFRYAIAAMQKHLDAGNKELPLVVPLLFYHGKTSPYPYSMNWLDCFTKPEMA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHH
KALYNNDFPLVDVTVMDDSAIMQHKRIALLELVQKHIYQKDINDILESLAILLLNDYHTD
HHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SQVRTLIEYLVTVGETQNVNALLEELAHQVPKHEGTLMTIAEQLIQQGKQEGLLQGEQKG
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHH
LQQGRQDTLKEMARNLLQSGVDKAAIMKATGFSSRELELISH
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHCCC
>Mature Secondary Structure
MLEIHLPTYLKTLCDLSTLKLESGSFLEDDLRPYYSDVLYSMKTECGDGYIYALIEHQSS
CEEEECHHHHHHHHCHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
PDEHMAFRMFRYAIAAMQKHLDAGNKELPLVVPLLFYHGKTSPYPYSMNWLDCFTKPEMA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHH
KALYNNDFPLVDVTVMDDSAIMQHKRIALLELVQKHIYQKDINDILESLAILLLNDYHTD
HHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SQVRTLIEYLVTVGETQNVNALLEELAHQVPKHEGTLMTIAEQLIQQGKQEGLLQGEQKG
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHH
LQQGRQDTLKEMARNLLQSGVDKAAIMKATGFSSRELELISH
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]