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The map label for this gene is galE [H]

Identifier: 209696421

GI number: 209696421

Start: 3281316

End: 3282278

Strand: Direct

Name: galE [H]

Synonym: VSAL_I3031

Alternate gene names: 209696421

Gene position: 3281316-3282278 (Clockwise)

Preceding gene: 209696420

Following gene: 209696422

Centisome position: 98.68

GC content: 37.38

Gene sequence:

>963_bases
TTGCCGAAAATATGCACAACTAATTTTAGACCTGAAGCGGTATTGTTAACCGGAGTCAGTGGGTTTATTGGTTCTGTTGT
AAATAAATATCTTGATTATCGCTGTTTAGTTGCTAGTCGAGAATTAGATGAAAAATCATCTAATTCTCGACAGATATTAA
TGTCTGATCTATTCGATTCAAAAAAAACATCAATCATTTTTGCACAGATAGAACAAGTCATACATTTAGCTGGTCTTGCT
CACAATCATTTATTTACTGACGCAGATTATCAATCGGTTAATGTTGATGGAACCTTACATTTAGCCAATGAAGCCGCTAA
AGCTGGCGTTAAACGTTTCGTTTTTGTCAGTTCTATTCGTGTTAATGGCACATCAACCACCAATACCCCTTTTTCTATTC
TGTCTGATTTGCAACCACATAATGCGTATGCGCAATCAAAATATGATGCTGAAATTGGCTTAAAAAAAATAGCTAAAGAA
ACAGGCATGGAATTGGTTATTGTTCGGCCGACATTAGTCTATGGTCCTAATGCCCCTGGTAATTTTGGCACTTTAACGCG
TTTGGTTAATAAAGTGCCTCTCTTACCATTTGGTCTAACTCAGAATAAGCGCGATTTTATTTCTGTACAGAACCTAGCTG
ATTTATTGGTGACGTGTGCGAAACATCCCAATGCAGGTGGTCATACTTTTTTAGCGTCTGAAAGTGAAACGGTGTCTATT
AAAGGATTTACTAATGCCATAGCTAAAGGACTTGGTACAAACTTAATACAGTTACCGGTGCCGGTTAGCTTAATGCGTTT
AGGCGCTAAGCTACTTGGTAAATCACTAATGGTTGAACAATTAGTTGGTAACCTTGAAGTGGATTCTTCTAATTTAAAAG
ATGTACTGGGTTGGACTCCACCTTATACAATGGAACAAACAATGGCTTCACTTTCAGAGACACTATCAGAGAGCAAACAA
TGA

Upstream 100 bases:

>100_bases
GTCATCTATCTACTTAAAACCTGAGCAAGAAATTTATGATAAATATTCTTTGCAAAGTTGGATCTGCACGTTATTTGATG
CTGATTAAAAGGAGTTTTTT

Downstream 100 bases:

>100_bases
TACGTATTATCGATTTCTTCGCAGCCTTTTTCGGTTTGCTTTTCTTATGGCCAGTTCTGCTTATCGTAACTATTATTGGC
TTGTTTGATACCGGTTCCCC

Product: O-antigen biosynthetic gene WbjF

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MPKICTTNFRPEAVLLTGVSGFIGSVVNKYLDYRCLVASRELDEKSSNSRQILMSDLFDSKKTSIIFAQIEQVIHLAGLA
HNHLFTDADYQSVNVDGTLHLANEAAKAGVKRFVFVSSIRVNGTSTTNTPFSILSDLQPHNAYAQSKYDAEIGLKKIAKE
TGMELVIVRPTLVYGPNAPGNFGTLTRLVNKVPLLPFGLTQNKRDFISVQNLADLLVTCAKHPNAGGHTFLASESETVSI
KGFTNAIAKGLGTNLIQLPVPVSLMRLGAKLLGKSLMVEQLVGNLEVDSSNLKDVLGWTPPYTMEQTMASLSETLSESKQ

Sequences:

>Translated_320_residues
MPKICTTNFRPEAVLLTGVSGFIGSVVNKYLDYRCLVASRELDEKSSNSRQILMSDLFDSKKTSIIFAQIEQVIHLAGLA
HNHLFTDADYQSVNVDGTLHLANEAAKAGVKRFVFVSSIRVNGTSTTNTPFSILSDLQPHNAYAQSKYDAEIGLKKIAKE
TGMELVIVRPTLVYGPNAPGNFGTLTRLVNKVPLLPFGLTQNKRDFISVQNLADLLVTCAKHPNAGGHTFLASESETVSI
KGFTNAIAKGLGTNLIQLPVPVSLMRLGAKLLGKSLMVEQLVGNLEVDSSNLKDVLGWTPPYTMEQTMASLSETLSESKQ
>Mature_319_residues
PKICTTNFRPEAVLLTGVSGFIGSVVNKYLDYRCLVASRELDEKSSNSRQILMSDLFDSKKTSIIFAQIEQVIHLAGLAH
NHLFTDADYQSVNVDGTLHLANEAAKAGVKRFVFVSSIRVNGTSTTNTPFSILSDLQPHNAYAQSKYDAEIGLKKIAKET
GMELVIVRPTLVYGPNAPGNFGTLTRLVNKVPLLPFGLTQNKRDFISVQNLADLLVTCAKHPNAGGHTFLASESETVSIK
GFTNAIAKGLGTNLIQLPVPVSLMRLGAKLLGKSLMVEQLVGNLEVDSSNLKDVLGWTPPYTMEQTMASLSETLSESKQ

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7657641, Length=182, Percent_Identity=33.5164835164835, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 34740; Mature: 34609

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKICTTNFRPEAVLLTGVSGFIGSVVNKYLDYRCLVASRELDEKSSNSRQILMSDLFDS
CCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHEHEEHHHHCCCCCCCCHHHHHHHHCCC
KKTSIIFAQIEQVIHLAGLAHNHLFTDADYQSVNVDGTLHLANEAAKAGVKRFVFVSSIR
CCHHHHHHHHHHHHHHHHHHHCCEECCCCCCEECCCCEEEECHHHHHHHHHHEEEEEEEE
VNGTSTTNTPFSILSDLQPHNAYAQSKYDAEIGLKKIAKETGMELVIVRPTLVYGPNAPG
ECCCCCCCCHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEEEECCCCCC
NFGTLTRLVNKVPLLPFGLTQNKRDFISVQNLADLLVTCAKHPNAGGHTFLASESETVSI
CHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEE
KGFTNAIAKGLGTNLIQLPVPVSLMRLGAKLLGKSLMVEQLVGNLEVDSSNLKDVLGWTP
CCHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC
PYTMEQTMASLSETLSESKQ
CCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PKICTTNFRPEAVLLTGVSGFIGSVVNKYLDYRCLVASRELDEKSSNSRQILMSDLFDS
CCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHEHEEHHHHCCCCCCCCHHHHHHHHCCC
KKTSIIFAQIEQVIHLAGLAHNHLFTDADYQSVNVDGTLHLANEAAKAGVKRFVFVSSIR
CCHHHHHHHHHHHHHHHHHHHCCEECCCCCCEECCCCEEEECHHHHHHHHHHEEEEEEEE
VNGTSTTNTPFSILSDLQPHNAYAQSKYDAEIGLKKIAKETGMELVIVRPTLVYGPNAPG
ECCCCCCCCHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEEEECCCCCC
NFGTLTRLVNKVPLLPFGLTQNKRDFISVQNLADLLVTCAKHPNAGGHTFLASESETVSI
CHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEE
KGFTNAIAKGLGTNLIQLPVPVSLMRLGAKLLGKSLMVEQLVGNLEVDSSNLKDVLGWTP
CCHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC
PYTMEQTMASLSETLSESKQ
CCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8820651; 10521656 [H]