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The map label for this gene is epsL [H]

Identifier: 209696422

GI number: 209696422

Start: 3282275

End: 3282823

Strand: Direct

Name: epsL [H]

Synonym: VSAL_I3032

Alternate gene names: 209696422

Gene position: 3282275-3282823 (Clockwise)

Preceding gene: 209696421

Following gene: 209696423

Centisome position: 98.71

GC content: 38.98

Gene sequence:

>549_bases
ATGATACGTATTATCGATTTCTTCGCAGCCTTTTTCGGTTTGCTTTTCTTATGGCCAGTTCTGCTTATCGTAACTATTAT
TGGCTTGTTTGATACCGGTTCCCCAATCTTCATTCAAGAACGAGTAGGGCGTAATAAAAAGCCGTTTAAACTTATTAAGT
TTCGCACTATGTCTGTTGAAACTAAATCGGTAGCTAGCCACTTAGCAAATAATGCATCAATCACAAAGCTTGGTAATTTT
TTGCGCAAGACCAAAATTGATGAGTTGCCTCAGCTCATCAACGTGGTGAAAGGTGAAATGAGCTTGGTTGGCCCTCGTCC
AAACTTATTTAACCAAGACGATCTAATTAAAGAGCGTGATGCATTAGGGGTATATGATGTACTTCCCGGTGTAACAGGTT
TAGCTCAAGTTCAAAATATCGATATGTCTACACCACAATTGTTAGCTAAAACTGACAAGCAGATGATTGATACGTTAACC
ATTAAAGATTACTTTAAATACATCATCATGACAGCGACAGGCAGTGGCTCGGGTGATGCGGTAAAATAA

Upstream 100 bases:

>100_bases
TGGATTCTTCTAATTTAAAAGATGTACTGGGTTGGACTCCACCTTATACAATGGAACAAACAATGGCTTCACTTTCAGAG
ACACTATCAGAGAGCAAACA

Downstream 100 bases:

>100_bases
TTTGCTTGAAACAAACTTAAAATCCCAGAAAGGTGATCTATTCACGATAACTTCTGGGATTTTTTGTATCTAATCCGTAT
CATTCATTTTGCTGATTTTT

Product: galactosyl transferase, capsular polysaccharide synthesis enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MIRIIDFFAAFFGLLFLWPVLLIVTIIGLFDTGSPIFIQERVGRNKKPFKLIKFRTMSVETKSVASHLANNASITKLGNF
LRKTKIDELPQLINVVKGEMSLVGPRPNLFNQDDLIKERDALGVYDVLPGVTGLAQVQNIDMSTPQLLAKTDKQMIDTLT
IKDYFKYIIMTATGSGSGDAVK

Sequences:

>Translated_182_residues
MIRIIDFFAAFFGLLFLWPVLLIVTIIGLFDTGSPIFIQERVGRNKKPFKLIKFRTMSVETKSVASHLANNASITKLGNF
LRKTKIDELPQLINVVKGEMSLVGPRPNLFNQDDLIKERDALGVYDVLPGVTGLAQVQNIDMSTPQLLAKTDKQMIDTLT
IKDYFKYIIMTATGSGSGDAVK
>Mature_182_residues
MIRIIDFFAAFFGLLFLWPVLLIVTIIGLFDTGSPIFIQERVGRNKKPFKLIKFRTMSVETKSVASHLANNASITKLGNF
LRKTKIDELPQLINVVKGEMSLVGPRPNLFNQDDLIKERDALGVYDVLPGVTGLAQVQNIDMSTPQLLAKTDKQMIDTLT
IKDYFKYIIMTATGSGSGDAVK

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=167, Percent_Identity=36.5269461077844, Blast_Score=99, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 20266; Mature: 20266

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRIIDFFAAFFGLLFLWPVLLIVTIIGLFDTGSPIFIQERVGRNKKPFKLIKFRTMSVE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCEEEEEEEECCCH
TKSVASHLANNASITKLGNFLRKTKIDELPQLINVVKGEMSLVGPRPNLFNQDDLIKERD
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCCCCCCHHHHHHHH
ALGVYDVLPGVTGLAQVQNIDMSTPQLLAKTDKQMIDTLTIKDYFKYIIMTATGSGSGDA
CCCHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC
VK
CC
>Mature Secondary Structure
MIRIIDFFAAFFGLLFLWPVLLIVTIIGLFDTGSPIFIQERVGRNKKPFKLIKFRTMSVE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCEEEEEEEECCCH
TKSVASHLANNASITKLGNFLRKTKIDELPQLINVVKGEMSLVGPRPNLFNQDDLIKERD
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCCCCCCHHHHHHHH
ALGVYDVLPGVTGLAQVQNIDMSTPQLLAKTDKQMIDTLTIKDYFKYIIMTATGSGSGDA
CCCHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC
VK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]