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The map label for this gene is yfjD [C]

Identifier: 209696251

GI number: 209696251

Start: 3085774

End: 3086835

Strand: Direct

Name: yfjD [C]

Synonym: VSAL_I2847

Alternate gene names: 209696251

Gene position: 3085774-3086835 (Clockwise)

Preceding gene: 209696248

Following gene: 209696253

Centisome position: 92.8

GC content: 39.55

Gene sequence:

>1062_bases
ATGTTAATTTTATCCATCTATATCGCTATTTCTATCAGCGTATCTTTTATATGTTCTGTTCTTGAGGCCATTTTACTCAG
TATCAGTCCTAGCTATCTAGCCCAAATGCGACAGGAAAAACATCCTTCCGCAGAAAGATTAACGCAACTAAAAAACAATG
TAGATCGCCCTTTAGCTTCCATTTTGACACTAAACACTATTGCCCATACCGCAGGTGCTGCAGCATCTGGTGCTCAAGCT
TCCATCGTATTTGGCAGTGAATGGCTAGGCGTATTCTCTGCGTTCTTAACATTCGCTATTTTACTGTTCTCTGAAATCGT
CCCTAAAACTATCGGGGCAACCTATTGGCGTCAACTCGCACCACTTGCGGGAAAAATGCTTTATTGGATGGTTTTATTAC
TAACGCCTGTTGTATGGGCTTCAGAGCAATTAACAAAACGCTTAGCTCGTGGGCATCAGCCTCCTAAATTAAGAGACGAA
ATTGCAGCAATGGCTACGCTTGCAAAAGAAAATGGGGAATTTGCGGAAGGTGAATCAAAAATCTTAACCAATATTTTAAA
TATTAAAGATATTTCAGTGACTCAAGTGATGACTCCGAGAACGGTACTGTTTCGTGTAAATTCAGAAATGAGTATTGACG
ATTTCTTACAAGATTATGCAGACACTCCATTTTCTCGCCCTTTAGTTTACAGCGAAGACAGTGATAACATCATTGGTTTC
ACACATCGATTAGAATTATTCTCTGCAGTACGTAAAGGTCAAGGCAGACGAACTTTAGGCTCTGTGATGCGTCCAATTCA
AGTGGTCATTAGTACTTCAACATTGCCAAAAGCTTTTGAGCATCTAATGAAGCACAGAGCACAGCTTGCTCTTGTTATTG
ATGAATACGGTACCGTTCAAGGCTTATTGACTCTAGAAGATATCTTTGAGTATATGGTTGGTGAAGAGATCATTGATGAA
GCAGACAAAACGACAGATATGCAACAATTAGCTCAACAACGTTGGATTAATTGGAAAAATAAACATGGCGTGATCGATAA
TACAGATGCAGAAGAACACTAA

Upstream 100 bases:

>100_bases
CGTCTCACAATTTGTTACTAATTTTCAATTATGAGTCATTGTAATTTGCTCATTCAATACCCATTTTATAAGGGCTTGCT
TACTTTTTTTGAGATTACTA

Downstream 100 bases:

>100_bases
TATGATTAGTGCGTAGTATAAAGGTGTTAGCAAGCCCCTTTAGATAAAAATAAAAAAACCGATGAATAATCATCGGTTTT
TTTATATGAGAAAAAATTAA

Product: modulator of ion transport

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MLILSIYIAISISVSFICSVLEAILLSISPSYLAQMRQEKHPSAERLTQLKNNVDRPLASILTLNTIAHTAGAAASGAQA
SIVFGSEWLGVFSAFLTFAILLFSEIVPKTIGATYWRQLAPLAGKMLYWMVLLLTPVVWASEQLTKRLARGHQPPKLRDE
IAAMATLAKENGEFAEGESKILTNILNIKDISVTQVMTPRTVLFRVNSEMSIDDFLQDYADTPFSRPLVYSEDSDNIIGF
THRLELFSAVRKGQGRRTLGSVMRPIQVVISTSTLPKAFEHLMKHRAQLALVIDEYGTVQGLLTLEDIFEYMVGEEIIDE
ADKTTDMQQLAQQRWINWKNKHGVIDNTDAEEH

Sequences:

>Translated_353_residues
MLILSIYIAISISVSFICSVLEAILLSISPSYLAQMRQEKHPSAERLTQLKNNVDRPLASILTLNTIAHTAGAAASGAQA
SIVFGSEWLGVFSAFLTFAILLFSEIVPKTIGATYWRQLAPLAGKMLYWMVLLLTPVVWASEQLTKRLARGHQPPKLRDE
IAAMATLAKENGEFAEGESKILTNILNIKDISVTQVMTPRTVLFRVNSEMSIDDFLQDYADTPFSRPLVYSEDSDNIIGF
THRLELFSAVRKGQGRRTLGSVMRPIQVVISTSTLPKAFEHLMKHRAQLALVIDEYGTVQGLLTLEDIFEYMVGEEIIDE
ADKTTDMQQLAQQRWINWKNKHGVIDNTDAEEH
>Mature_353_residues
MLILSIYIAISISVSFICSVLEAILLSISPSYLAQMRQEKHPSAERLTQLKNNVDRPLASILTLNTIAHTAGAAASGAQA
SIVFGSEWLGVFSAFLTFAILLFSEIVPKTIGATYWRQLAPLAGKMLYWMVLLLTPVVWASEQLTKRLARGHQPPKLRDE
IAAMATLAKENGEFAEGESKILTNILNIKDISVTQVMTPRTVLFRVNSEMSIDDFLQDYADTPFSRPLVYSEDSDNIIGF
THRLELFSAVRKGQGRRTLGSVMRPIQVVISTSTLPKAFEHLMKHRAQLALVIDEYGTVQGLLTLEDIFEYMVGEEIIDE
ADKTTDMQQLAQQRWINWKNKHGVIDNTDAEEH

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=250, Percent_Identity=24.8, Blast_Score=94, Evalue=2e-19,
Organism=Escherichia coli, GI145693175, Length=338, Percent_Identity=23.0769230769231, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1786879, Length=163, Percent_Identity=30.6748466257669, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI1790664, Length=337, Percent_Identity=24.3323442136499, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87082033, Length=198, Percent_Identity=23.7373737373737, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324512, Length=258, Percent_Identity=25.1937984496124, Blast_Score=79, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR002550 [H]

Pfam domain/function: PF00571 CBS; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 39467; Mature: 39467

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILSIYIAISISVSFICSVLEAILLSISPSYLAQMRQEKHPSAERLTQLKNNVDRPLAS
CCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ILTLNTIAHTAGAAASGAQASIVFGSEWLGVFSAFLTFAILLFSEIVPKTIGATYWRQLA
HHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLAGKMLYWMVLLLTPVVWASEQLTKRLARGHQPPKLRDEIAAMATLAKENGEFAEGESK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHH
ILTNILNIKDISVTQVMTPRTVLFRVNSEMSIDDFLQDYADTPFSRPLVYSEDSDNIIGF
HHHHHHCCCCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCEEECCCCCCEEHH
THRLELFSAVRKGQGRRTLGSVMRPIQVVISTSTLPKAFEHLMKHRAQLALVIDEYGTVQ
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEECCCCCHH
GLLTLEDIFEYMVGEEIIDEADKTTDMQQLAQQRWINWKNKHGVIDNTDAEEH
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLILSIYIAISISVSFICSVLEAILLSISPSYLAQMRQEKHPSAERLTQLKNNVDRPLAS
CCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ILTLNTIAHTAGAAASGAQASIVFGSEWLGVFSAFLTFAILLFSEIVPKTIGATYWRQLA
HHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLAGKMLYWMVLLLTPVVWASEQLTKRLARGHQPPKLRDEIAAMATLAKENGEFAEGESK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHH
ILTNILNIKDISVTQVMTPRTVLFRVNSEMSIDDFLQDYADTPFSRPLVYSEDSDNIIGF
HHHHHHCCCCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCEEECCCCCCEEHH
THRLELFSAVRKGQGRRTLGSVMRPIQVVISTSTLPKAFEHLMKHRAQLALVIDEYGTVQ
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEECCCCCHH
GLLTLEDIFEYMVGEEIIDEADKTTDMQQLAQQRWINWKNKHGVIDNTDAEEH
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]