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The map label for this gene is yjcG [C]

Identifier: 209696232

GI number: 209696232

Start: 3062162

End: 3063865

Strand: Direct

Name: yjcG [C]

Synonym: VSAL_I2828

Alternate gene names: 209696232

Gene position: 3062162-3063865 (Clockwise)

Preceding gene: 209696231

Following gene: 209696235

Centisome position: 92.09

GC content: 44.66

Gene sequence:

>1704_bases
ATGGATATCCAAACTTGGACGTTTATATTAGTAGGTATCACTTTCACCCTTTATATCGGTATTGCGATATGGGCAAGAGC
AGGATCAACCAGTGAATTCTATGTGGCTGGCGGAGGGGTTCACCCTATTGCTAATGGCATGGCAACCGCCGTTGACTGGA
TGTCGGCTGCATCATTTATCTCAATGGCAGGTATCATTTCATTTGTTGGTTATGATGGGACTGTTTATTTAATGGGTTGG
ACTGGCGGTTATGTTTTATTAGCTTTATGTCTTGCGCCTTATTTACGTAAATTTGGTAAGTTTACGGTGCCAGATTTTAT
TGGCGAACGTTATTACTCACGAACCGCTCGTATGGTTGCGGTGTTCTGTGCCATCTTTGTCTCTTTCACGTATGTGGCAG
GACAAATGCGTGGTGTTGGTGTGGTGTTCTCTCGGTTCCTAGAAGTTGATATCAACGTCGGCATCATCATTGGTATGGGT
ATCGTATTTTTCTATGCGGTATTAGGCGGTATGAAAGGCATCACTTATACGCAGGTAGCTCAATTCTGTGTCCTCATTTT
CGCCTTCCTTGTTCCTGCTGTTTTCACCTCAATTATGATGACAGATAACGTTTTCCCTCAACTTGGTATGGGCTCAACCG
TTACCGGCTCTGAAGTTTATTTACTGGATAAACTGGATGGATTAACCACTGAACTTGGTTTTACACCATACACTGATGGC
TCTAAGAGCATGGTTGATGTGTTCTTTATCTGTGCTGCACTAATGGTTGGTACAGCAGGGCTTCCTCACGTAATTATTCG
TTTCTTCACGGTTCCTCGTGTTAAAGATGCACGTATCTCTGCAGGTTGGGCTTTACTGTTTATTTCATTCTTATACACCA
CTGCACCTGCGGTTGCCGCGTTTGCTCGTGTAAATATGATTGAAACCATTAATGGAACCGACAACCAAGGGGTTGCCGCT
GCGGATGCACCGAGTTGGTATAAAAACTGGGAAGACACAGGTCTAGTTGCTTGGGAAGATAAAAATGGCGATGGCAAGAT
GTTCTATTCTGGTGATGAGCGTAATGAAATGGACATCAACCGAGATATTATTGTTCTAGCATCTCCTGAACTGGCAAACT
TACCAAACTGGGTTGTTGCATTGCTAGCAGCCGGTGGTTTAGCGGCGGCATTATCTACGGCGGCAGGTCTGCTACTGGTT
ATCTCAACCTCTATCTCTCATGATTTATTGAAAAAAGGCTTTAAGCCAGACATGACCGATAAGCAAGAGCTACTCGCAGC
CCGCCTTGCTGCCATCGTTGCCATCATTGGTGCTGGTTACTTAGGGATAAACCCGCCGGGCTTTGTCGCACAGGTGGTCG
CCTTCTCCTTCGGTTTAGCAGCAGCTTCTTTCTTCCCTGCCATTATCTTAGGTATTTTCTATAAGAAGATGAATAAGGAA
GGCGCCATTGCAGGCATGGTTTCTGGTGTGGTGTTCACTACAGCTTATATCGTTTACTTTAAATTCATTAATCCAGCAGC
AAGCACACCAGACAACTGGTGGTTTGGTATCAGCCCTGAAGGGATCGGTACGCTAGGTATGTGTCTAAACTTTATTGTTT
CGATTGCTGTGAATAAAGTCACCGCTGAAGTACCACAAGATGTTCAAGATCTGGTTGAGTCGATTCGTTATCCTAAAGGT
GCCGGTGAAGCTCAGGATCATTAA

Upstream 100 bases:

>100_bases
GGTTCAATTTATACCTTTGTTGCCCTGATCTTTATCTATGTGGTTCGCATGAACTCACTGGATAAAAAATACAACGTACA
AGAAGACTAGAGGAATTAGC

Downstream 100 bases:

>100_bases
TCTGATAATGTTCAGTTTAATAACGTCAGAAAAATAATTTGGCTGATATGAAAAGGGAGTTAGTTATGCTAGCTCCCTTC
TTTTATGATTAGTCCTAAAC

Product: sodium/solute symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MDIQTWTFILVGITFTLYIGIAIWARAGSTSEFYVAGGGVHPIANGMATAVDWMSAASFISMAGIISFVGYDGTVYLMGW
TGGYVLLALCLAPYLRKFGKFTVPDFIGERYYSRTARMVAVFCAIFVSFTYVAGQMRGVGVVFSRFLEVDINVGIIIGMG
IVFFYAVLGGMKGITYTQVAQFCVLIFAFLVPAVFTSIMMTDNVFPQLGMGSTVTGSEVYLLDKLDGLTTELGFTPYTDG
SKSMVDVFFICAALMVGTAGLPHVIIRFFTVPRVKDARISAGWALLFISFLYTTAPAVAAFARVNMIETINGTDNQGVAA
ADAPSWYKNWEDTGLVAWEDKNGDGKMFYSGDERNEMDINRDIIVLASPELANLPNWVVALLAAGGLAAALSTAAGLLLV
ISTSISHDLLKKGFKPDMTDKQELLAARLAAIVAIIGAGYLGINPPGFVAQVVAFSFGLAAASFFPAIILGIFYKKMNKE
GAIAGMVSGVVFTTAYIVYFKFINPAASTPDNWWFGISPEGIGTLGMCLNFIVSIAVNKVTAEVPQDVQDLVESIRYPKG
AGEAQDH

Sequences:

>Translated_567_residues
MDIQTWTFILVGITFTLYIGIAIWARAGSTSEFYVAGGGVHPIANGMATAVDWMSAASFISMAGIISFVGYDGTVYLMGW
TGGYVLLALCLAPYLRKFGKFTVPDFIGERYYSRTARMVAVFCAIFVSFTYVAGQMRGVGVVFSRFLEVDINVGIIIGMG
IVFFYAVLGGMKGITYTQVAQFCVLIFAFLVPAVFTSIMMTDNVFPQLGMGSTVTGSEVYLLDKLDGLTTELGFTPYTDG
SKSMVDVFFICAALMVGTAGLPHVIIRFFTVPRVKDARISAGWALLFISFLYTTAPAVAAFARVNMIETINGTDNQGVAA
ADAPSWYKNWEDTGLVAWEDKNGDGKMFYSGDERNEMDINRDIIVLASPELANLPNWVVALLAAGGLAAALSTAAGLLLV
ISTSISHDLLKKGFKPDMTDKQELLAARLAAIVAIIGAGYLGINPPGFVAQVVAFSFGLAAASFFPAIILGIFYKKMNKE
GAIAGMVSGVVFTTAYIVYFKFINPAASTPDNWWFGISPEGIGTLGMCLNFIVSIAVNKVTAEVPQDVQDLVESIRYPKG
AGEAQDH
>Mature_567_residues
MDIQTWTFILVGITFTLYIGIAIWARAGSTSEFYVAGGGVHPIANGMATAVDWMSAASFISMAGIISFVGYDGTVYLMGW
TGGYVLLALCLAPYLRKFGKFTVPDFIGERYYSRTARMVAVFCAIFVSFTYVAGQMRGVGVVFSRFLEVDINVGIIIGMG
IVFFYAVLGGMKGITYTQVAQFCVLIFAFLVPAVFTSIMMTDNVFPQLGMGSTVTGSEVYLLDKLDGLTTELGFTPYTDG
SKSMVDVFFICAALMVGTAGLPHVIIRFFTVPRVKDARISAGWALLFISFLYTTAPAVAAFARVNMIETINGTDNQGVAA
ADAPSWYKNWEDTGLVAWEDKNGDGKMFYSGDERNEMDINRDIIVLASPELANLPNWVVALLAAGGLAAALSTAAGLLLV
ISTSISHDLLKKGFKPDMTDKQELLAARLAAIVAIIGAGYLGINPPGFVAQVVAFSFGLAAASFFPAIILGIFYKKMNKE
GAIAGMVSGVVFTTAYIVYFKFINPAASTPDNWWFGISPEGIGTLGMCLNFIVSIAVNKVTAEVPQDVQDLVESIRYPKG
AGEAQDH

Specific function: Unknown

COG id: COG4147

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Escherichia coli, GI1790503, Length=492, Percent_Identity=26.0162601626016, Blast_Score=148, Evalue=9e-37,
Organism=Escherichia coli, GI1787251, Length=504, Percent_Identity=21.2301587301587, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR019899 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 60903; Mature: 60903

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIQTWTFILVGITFTLYIGIAIWARAGSTSEFYVAGGGVHPIANGMATAVDWMSAASFI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH
SMAGIISFVGYDGTVYLMGWTGGYVLLALCLAPYLRKFGKFTVPDFIGERYYSRTARMVA
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VFCAIFVSFTYVAGQMRGVGVVFSRFLEVDINVGIIIGMGIVFFYAVLGGMKGITYTQVA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
QFCVLIFAFLVPAVFTSIMMTDNVFPQLGMGSTVTGSEVYLLDKLDGLTTELGFTPYTDG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCC
SKSMVDVFFICAALMVGTAGLPHVIIRFFTVPRVKDARISAGWALLFISFLYTTAPAVAA
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FARVNMIETINGTDNQGVAAADAPSWYKNWEDTGLVAWEDKNGDGKMFYSGDERNEMDIN
HHHHHHHEECCCCCCCCCEECCCCHHHCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCC
RDIIVLASPELANLPNWVVALLAAGGLAAALSTAAGLLLVISTSISHDLLKKGFKPDMTD
CCEEEEECCCHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KQELLAARLAAIVAIIGAGYLGINPPGFVAQVVAFSFGLAAASFFPAIILGIFYKKMNKE
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAIAGMVSGVVFTTAYIVYFKFINPAASTPDNWWFGISPEGIGTLGMCLNFIVSIAVNKV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHH
TAEVPQDVQDLVESIRYPKGAGEAQDH
HHHCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MDIQTWTFILVGITFTLYIGIAIWARAGSTSEFYVAGGGVHPIANGMATAVDWMSAASFI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH
SMAGIISFVGYDGTVYLMGWTGGYVLLALCLAPYLRKFGKFTVPDFIGERYYSRTARMVA
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VFCAIFVSFTYVAGQMRGVGVVFSRFLEVDINVGIIIGMGIVFFYAVLGGMKGITYTQVA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
QFCVLIFAFLVPAVFTSIMMTDNVFPQLGMGSTVTGSEVYLLDKLDGLTTELGFTPYTDG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCC
SKSMVDVFFICAALMVGTAGLPHVIIRFFTVPRVKDARISAGWALLFISFLYTTAPAVAA
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FARVNMIETINGTDNQGVAAADAPSWYKNWEDTGLVAWEDKNGDGKMFYSGDERNEMDIN
HHHHHHHEECCCCCCCCCEECCCCHHHCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCC
RDIIVLASPELANLPNWVVALLAAGGLAAALSTAAGLLLVISTSISHDLLKKGFKPDMTD
CCEEEEECCCHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KQELLAARLAAIVAIIGAGYLGINPPGFVAQVVAFSFGLAAASFFPAIILGIFYKKMNKE
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAIAGMVSGVVFTTAYIVYFKFINPAASTPDNWWFGISPEGIGTLGMCLNFIVSIAVNKV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHH
TAEVPQDVQDLVESIRYPKGAGEAQDH
HHHCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1356967 [H]