Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209696235

Identifier: 209696235

GI number: 209696235

Start: 3068890

End: 3070722

Strand: Direct

Name: 209696235

Synonym: VSAL_I2831

Alternate gene names: NA

Gene position: 3068890-3070722 (Clockwise)

Preceding gene: 209696232

Following gene: 209696236

Centisome position: 92.29

GC content: 38.46

Gene sequence:

>1833_bases
ATGCCAAACAATATTGATCTCACCATTGCACCCTTCAATAAATTAAACGACAGACAGAAAAAGACGTTAATTAATCATCT
TGATATTGCGTATTTTCGGCATGGCGACACGTTACTTTATCAAGGTCAGCCTTCTGAACATCTTTTCATTATCATTAAGG
GCATTGTTGAAGAACGATCCAGCAGTAATGGAGAAATTTACGCTCATTATACGAATGACGATATTTTTGACGTACGATCT
CAACTCGAACAACCCGTAAAACATACTTATCAAGCCATTGAAGATACCTTGTGCCACCTGCTGCCTACCGCCATTTTCCT
TACTCTTTATCATGAAAACACAGAGTTCGCCGCTTATTTCAATAGCAGTTTGGCCACACGAAAAGCGTTAATGACACAAG
CTCATCAACAGCAAAACTTAGCGGAGTTTATTCTCACCAAAATAGATAACGAAACCATTCAACCCAGTTTAGTTGTTGAT
TGGAATACCTCATTACAACAAGTCACTCAATTATTAAAAGACAAGGCAGTGGATGCATTATTTGTTGAACTAAACCAATA
CGATACTCGCCATAAATCGAATACTGCGCATTTACCGATTGGGATAATTACTCGAACAGATTTACTGCACGCTCTTATGC
TCGAAGGCTATTCTCCTAATCATCCGGTAGGTCCAATAACCACTTACCCGATAGTAAGTATCAAAAAATACGATTATTTG
TTCAATGCCATGACACTAATGACCCGCCACCACGTGAAACGAGTGGCGGTTATTGAAGAAAATAAATTGATCGGTATGTT
AGATATGACTCAAATATTGAGCTTATTTTCCACCCACTACCATGTACTCACATTGAGAATTGCTCGAGCACAAACCATTG
ATGAACTCGCTTTGGCGGCCAACAGCCAAGCACAGTTAGTTGAAACGCTTCTTAACAATGGAATTCGTACCCGTTTTATT
ATGGAATTGATTTCTACCATTAATGAACAAATTATAGAAAAAGCATTTAATCTCACCGTGCCTAAAGCTCTGCATGATCA
TTGCTGCTTGATCGTGATGGGATCAGAAGGAAGAGGCGAACAAATTCTTAAAACCGATCAAGACAATGCCTTAATCATTA
AAGAAGGATTAAAGTGGCATCAATGCCATGAACTGATGAAGAAGTTCACTCACACCCTGCTGCAGCTAGGCTATCCATTA
TGCAAAGGGAATATCATGGTCAGCAATGCGCATTGGGTAAAAACTGAACGTGAATGGCAACATTACATCACCAAATTAAG
CACCGAATATAACGGTGAAAACATGATGCACCTTGCTATTTTATCGGATGCTCATGCCGTTGCGGGAAATCACCAATTAC
TTTCTCCTCTAAAACATTTATTAACTCAGAAGATGCAAGAAAATGAGCTCGCACTCAGTATCTTTGCCAGCCCTGCATTG
CAATTTATTGTGCCATTAACTCTATTCGGAAAAGTAAAAAACAAAAAAGAAGGCATTGATATTAAACAAGGTGGCATTTT
CCCTATCGTTCACGGAATTCGAACTCTCAGCTTAGAACATGGTATTACCGACACAAACACATTTACTCGTATTGAACTTC
TTTGCCAACAGAACATCCTTGAATCCACAACAGCAGAAAATTTGAGTGAAGCTCTAAAGCTATTTTTTAAATTACGCTTA
CGCCACCAGTTAGAAGAAGTAAACCCAATGCCCAGTAATCAAATTCACATTCAACGATTAGATAGAAGTGAACGTGATTT
ACTTCGCCACAGTTTACACATCGTTAAAAAATTCAAAGAATGGCTTGGTTATCATTACCAAATTAGGGATTAA

Upstream 100 bases:

>100_bases
AAACCCGAGATTTTAGAACTTTATGGGTAGACTAAAGTCGTCTTCATACTGTGCCTTTTTTTAGCCAAAATAGTAAAAAG
GAACGCACAGAGGATGGGTT

Downstream 100 bases:

>100_bases
CATGAATCAACTTCAACGCCTATGGTGGCGCTATAAACTACGAAACCACTCGAATCACTTTCTTTTTGAACGCTACAACG
GCGAAGAATTGGTTTCTATT

Product: nucleotidyltransferases

Products: NA

Alternate protein names: Signal-Transduction Protein; Nucleotidyltransferase; Signal Transduction Protein; Signal Transduction Protein With CBS Domains; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; CBS Domain Protein; Signal Protein; Inosine-5-Monophosphate Dehydrogenase; DNA Polymerase III Subunit Epsilon; CBS Signal-Transduction Protein; Multidomain-Containing Protein; Nucleotidyltransferase Domain Family Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Nucleotidyltransferases

Number of amino acids: Translated: 610; Mature: 609

Protein sequence:

>610_residues
MPNNIDLTIAPFNKLNDRQKKTLINHLDIAYFRHGDTLLYQGQPSEHLFIIIKGIVEERSSSNGEIYAHYTNDDIFDVRS
QLEQPVKHTYQAIEDTLCHLLPTAIFLTLYHENTEFAAYFNSSLATRKALMTQAHQQQNLAEFILTKIDNETIQPSLVVD
WNTSLQQVTQLLKDKAVDALFVELNQYDTRHKSNTAHLPIGIITRTDLLHALMLEGYSPNHPVGPITTYPIVSIKKYDYL
FNAMTLMTRHHVKRVAVIEENKLIGMLDMTQILSLFSTHYHVLTLRIARAQTIDELALAANSQAQLVETLLNNGIRTRFI
MELISTINEQIIEKAFNLTVPKALHDHCCLIVMGSEGRGEQILKTDQDNALIIKEGLKWHQCHELMKKFTHTLLQLGYPL
CKGNIMVSNAHWVKTEREWQHYITKLSTEYNGENMMHLAILSDAHAVAGNHQLLSPLKHLLTQKMQENELALSIFASPAL
QFIVPLTLFGKVKNKKEGIDIKQGGIFPIVHGIRTLSLEHGITDTNTFTRIELLCQQNILESTTAENLSEALKLFFKLRL
RHQLEEVNPMPSNQIHIQRLDRSERDLLRHSLHIVKKFKEWLGYHYQIRD

Sequences:

>Translated_610_residues
MPNNIDLTIAPFNKLNDRQKKTLINHLDIAYFRHGDTLLYQGQPSEHLFIIIKGIVEERSSSNGEIYAHYTNDDIFDVRS
QLEQPVKHTYQAIEDTLCHLLPTAIFLTLYHENTEFAAYFNSSLATRKALMTQAHQQQNLAEFILTKIDNETIQPSLVVD
WNTSLQQVTQLLKDKAVDALFVELNQYDTRHKSNTAHLPIGIITRTDLLHALMLEGYSPNHPVGPITTYPIVSIKKYDYL
FNAMTLMTRHHVKRVAVIEENKLIGMLDMTQILSLFSTHYHVLTLRIARAQTIDELALAANSQAQLVETLLNNGIRTRFI
MELISTINEQIIEKAFNLTVPKALHDHCCLIVMGSEGRGEQILKTDQDNALIIKEGLKWHQCHELMKKFTHTLLQLGYPL
CKGNIMVSNAHWVKTEREWQHYITKLSTEYNGENMMHLAILSDAHAVAGNHQLLSPLKHLLTQKMQENELALSIFASPAL
QFIVPLTLFGKVKNKKEGIDIKQGGIFPIVHGIRTLSLEHGITDTNTFTRIELLCQQNILESTTAENLSEALKLFFKLRL
RHQLEEVNPMPSNQIHIQRLDRSERDLLRHSLHIVKKFKEWLGYHYQIRD
>Mature_609_residues
PNNIDLTIAPFNKLNDRQKKTLINHLDIAYFRHGDTLLYQGQPSEHLFIIIKGIVEERSSSNGEIYAHYTNDDIFDVRSQ
LEQPVKHTYQAIEDTLCHLLPTAIFLTLYHENTEFAAYFNSSLATRKALMTQAHQQQNLAEFILTKIDNETIQPSLVVDW
NTSLQQVTQLLKDKAVDALFVELNQYDTRHKSNTAHLPIGIITRTDLLHALMLEGYSPNHPVGPITTYPIVSIKKYDYLF
NAMTLMTRHHVKRVAVIEENKLIGMLDMTQILSLFSTHYHVLTLRIARAQTIDELALAANSQAQLVETLLNNGIRTRFIM
ELISTINEQIIEKAFNLTVPKALHDHCCLIVMGSEGRGEQILKTDQDNALIIKEGLKWHQCHELMKKFTHTLLQLGYPLC
KGNIMVSNAHWVKTEREWQHYITKLSTEYNGENMMHLAILSDAHAVAGNHQLLSPLKHLLTQKMQENELALSIFASPALQ
FIVPLTLFGKVKNKKEGIDIKQGGIFPIVHGIRTLSLEHGITDTNTFTRIELLCQQNILESTTAENLSEALKLFFKLRLR
HQLEEVNPMPSNQIHIQRLDRSERDLLRHSLHIVKKFKEWLGYHYQIRD

Specific function: Unknown

COG id: COG2905

COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70076; Mature: 69945

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNNIDLTIAPFNKLNDRQKKTLINHLDIAYFRHGDTLLYQGQPSEHLFIIIKGIVEERS
CCCCCEEEEECCHHCCHHHHHHHHHHHHEEEEECCCEEEECCCCCCEEEEEEEHHHHHCC
SSNGEIYAHYTNDDIFDVRSQLEQPVKHTYQAIEDTLCHLLPTAIFLTLYHENTEFAAYF
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEHH
NSSLATRKALMTQAHQQQNLAEFILTKIDNETIQPSLVVDWNTSLQQVTQLLKDKAVDAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCHHHE
FVELNQYDTRHKSNTAHLPIGIITRTDLLHALMLEGYSPNHPVGPITTYPIVSIKKYDYL
EEEHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHH
FNAMTLMTRHHVKRVAVIEENKLIGMLDMTQILSLFSTHYHVLTLRIARAQTIDELALAA
HHHHHHHHHHHHHHEEEEECCCEEEHHHHHHHHHHHHCCHHEEEEEHHHHHHHHHHHHHC
NSQAQLVETLLNNGIRTRFIMELISTINEQIIEKAFNLTVPKALHDHCCLIVMGSEGRGE
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEECCCCCCC
QILKTDQDNALIIKEGLKWHQCHELMKKFTHTLLQLGYPLCKGNIMVSNAHWVKTEREWQ
CCEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEECCCEEEECCEEECCHHHHH
HYITKLSTEYNGENMMHLAILSDAHAVAGNHQLLSPLKHLLTQKMQENELALSIFASPAL
HHHHHHHCCCCCCCEEEEEEECCCHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHH
QFIVPLTLFGKVKNKKEGIDIKQGGIFPIVHGIRTLSLEHGITDTNTFTRIELLCQQNIL
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
ESTTAENLSEALKLFFKLRLRHQLEEVNPMPSNQIHIQRLDRSERDLLRHSLHIVKKFKE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
WLGYHYQIRD
HCCCEEEECC
>Mature Secondary Structure 
PNNIDLTIAPFNKLNDRQKKTLINHLDIAYFRHGDTLLYQGQPSEHLFIIIKGIVEERS
CCCCEEEEECCHHCCHHHHHHHHHHHHEEEEECCCEEEECCCCCCEEEEEEEHHHHHCC
SSNGEIYAHYTNDDIFDVRSQLEQPVKHTYQAIEDTLCHLLPTAIFLTLYHENTEFAAYF
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEHH
NSSLATRKALMTQAHQQQNLAEFILTKIDNETIQPSLVVDWNTSLQQVTQLLKDKAVDAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCHHHE
FVELNQYDTRHKSNTAHLPIGIITRTDLLHALMLEGYSPNHPVGPITTYPIVSIKKYDYL
EEEHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHH
FNAMTLMTRHHVKRVAVIEENKLIGMLDMTQILSLFSTHYHVLTLRIARAQTIDELALAA
HHHHHHHHHHHHHHEEEEECCCEEEHHHHHHHHHHHHCCHHEEEEEHHHHHHHHHHHHHC
NSQAQLVETLLNNGIRTRFIMELISTINEQIIEKAFNLTVPKALHDHCCLIVMGSEGRGE
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEECCCCCCC
QILKTDQDNALIIKEGLKWHQCHELMKKFTHTLLQLGYPLCKGNIMVSNAHWVKTEREWQ
CCEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEECCCEEEECCEEECCHHHHH
HYITKLSTEYNGENMMHLAILSDAHAVAGNHQLLSPLKHLLTQKMQENELALSIFASPAL
HHHHHHHCCCCCCCEEEEEEECCCHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHH
QFIVPLTLFGKVKNKKEGIDIKQGGIFPIVHGIRTLSLEHGITDTNTFTRIELLCQQNIL
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
ESTTAENLSEALKLFFKLRLRHQLEEVNPMPSNQIHIQRLDRSERDLLRHSLHIVKKFKE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
WLGYHYQIRD
HCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA