The gene/protein map for NC_012590 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209696220

Identifier: 209696220

GI number: 209696220

Start: 3050102

End: 3051352

Strand: Reverse

Name: 209696220

Synonym: VSAL_I2816

Alternate gene names: NA

Gene position: 3051352-3050102 (Counterclockwise)

Preceding gene: 209696221

Following gene: 209696211

Centisome position: 91.77

GC content: 39.89

Gene sequence:

>1251_bases
TTGTTTTTTTTAAGGTCTTTTCATTTTATTAGGTTTTCTATTATGTTTTCTCAATTTAGCCATAACGTTCGACAGTATAT
GTTGGTGACGTTTAATTATTGGAATTTCACTATTACTGATGGCGCATTGCGTATGTTGGTGGTGCTGTATTTTCATGATT
TAGGTTATGGCACCTTAGCCATTGCTTCTCTCTTTTTATTTTATGAATTTTTTGGTGTCGTAACGAATTTACTCGGAGGG
TGGTTAGGGGCTCGGTTAGGGCTAAATAAAACCATGAATGTGGGTTTGATAATGCAAGTTTTTGCATTATTGATGCTGGC
ATTACCGAGTGTTTGGTTAACTATCCCATGGGTGATGGCAGCACAAGCATTATCAGGTATTGCTAAAGATCTGAATAAGA
TGAGTGCAAAAAGTGCGATTAAAACATTGGTGCCTAGCGATCAAGAAGGGGCGCTCTATAAGTGGATAGCGATTCTTACG
GGTTCTAAAAATGCGCTTAAAGGGGCCGGGTTCTTTTTAGGTGGATTACTATTAACGACGGTTGGATTTCAGCTTGCCGT
TATTGGGATGGCAGCGGTTCTTTTTGCTGTTTTTCTTGGTAGCGTAATGTTGCTTGATGGTGACATGGGAAAAGCAAAGT
CCAAACCTAAATTTACGCAGTTATTTTCAAAATCAGAACAGATTAATCGGTTATCAGCGGCACGTTTATTTTTGTTTGGT
GCAAGAGATGTTTGGTTTGTCGTTGCTTTACCGATTTATTTAGGCAGTGTGTTTGGTTGGGATCACTCTTTAGTGGGTGG
TTTTTTAGCATTGTGGGTTATTGCTTATGGGTTTGTTCAAGGATTTGCTCCTAAGATAACAGGTAAAAAAGAAGGCCGAA
CCCCTGATGGCAGAGCGGCATTACATTGGGTTGCGCTGTTAACGATAGTCACGGGGATTATTGCGTATCTAGTGCAAGTT
GAGTGGCAAGCTGAATATACGATCGTGATTGGTTTATTGATGTTTGGGGCTGTATTTGCGGTTAATTCGTCATTACATTC
GTACTTGATTGTGAGTTACGCCAAAGGCGATGGTGTTTCTGTGGATGTCGGTTTTTATTATATGGCGAATGCGATGGGAC
GTTTGATCGGAACGATTTTATCTGGACTAGTCTTTCAAGTGGCAGGTTTTGCAGCGTGTTTGTGGGTATCTTTCGGTTTC
TTGCTTCTATCTACGCTGATATCAATTAAATTACCTAAAAATACAGAATGA

Upstream 100 bases:

>100_bases
AGTTCAAGCGTTACGTCCGGGGGCTTTCACTAAGCCTGTGCAAATTGAATACATTGATTTTATTGCTCACAAATAATCTG
CATTAACAAAGACCTTAATA

Downstream 100 bases:

>100_bases
CGTTAATAGAGATTAAATCATTAAAATGGACTTTCTTTCTGTAATTCTGCACAAATATCGACAATTGCTAATGACAGACC
AGAACGGATCATTTGTTTTT

Product: MFS transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Facilitator Superfamily Multidrug-Efflux Transporter; Membrane Transporter; Facilitator Superfamily Transporter; Multidrug Efflux Transporter MFS Family; Multidrug-Efflux Transporter; Nonfunctional Facilitator Superfamily Protein; MFS Transporter; Transporter-Like Protein; Permease Of Facilitator Superfamily; Nitric Oxide Reductase Cytochrome B Subunit

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MFFLRSFHFIRFSIMFSQFSHNVRQYMLVTFNYWNFTITDGALRMLVVLYFHDLGYGTLAIASLFLFYEFFGVVTNLLGG
WLGARLGLNKTMNVGLIMQVFALLMLALPSVWLTIPWVMAAQALSGIAKDLNKMSAKSAIKTLVPSDQEGALYKWIAILT
GSKNALKGAGFFLGGLLLTTVGFQLAVIGMAAVLFAVFLGSVMLLDGDMGKAKSKPKFTQLFSKSEQINRLSAARLFLFG
ARDVWFVVALPIYLGSVFGWDHSLVGGFLALWVIAYGFVQGFAPKITGKKEGRTPDGRAALHWVALLTIVTGIIAYLVQV
EWQAEYTIVIGLLMFGAVFAVNSSLHSYLIVSYAKGDGVSVDVGFYYMANAMGRLIGTILSGLVFQVAGFAACLWVSFGF
LLLSTLISIKLPKNTE

Sequences:

>Translated_416_residues
MFFLRSFHFIRFSIMFSQFSHNVRQYMLVTFNYWNFTITDGALRMLVVLYFHDLGYGTLAIASLFLFYEFFGVVTNLLGG
WLGARLGLNKTMNVGLIMQVFALLMLALPSVWLTIPWVMAAQALSGIAKDLNKMSAKSAIKTLVPSDQEGALYKWIAILT
GSKNALKGAGFFLGGLLLTTVGFQLAVIGMAAVLFAVFLGSVMLLDGDMGKAKSKPKFTQLFSKSEQINRLSAARLFLFG
ARDVWFVVALPIYLGSVFGWDHSLVGGFLALWVIAYGFVQGFAPKITGKKEGRTPDGRAALHWVALLTIVTGIIAYLVQV
EWQAEYTIVIGLLMFGAVFAVNSSLHSYLIVSYAKGDGVSVDVGFYYMANAMGRLIGTILSGLVFQVAGFAACLWVSFGF
LLLSTLISIKLPKNTE
>Mature_416_residues
MFFLRSFHFIRFSIMFSQFSHNVRQYMLVTFNYWNFTITDGALRMLVVLYFHDLGYGTLAIASLFLFYEFFGVVTNLLGG
WLGARLGLNKTMNVGLIMQVFALLMLALPSVWLTIPWVMAAQALSGIAKDLNKMSAKSAIKTLVPSDQEGALYKWIAILT
GSKNALKGAGFFLGGLLLTTVGFQLAVIGMAAVLFAVFLGSVMLLDGDMGKAKSKPKFTQLFSKSEQINRLSAARLFLFG
ARDVWFVVALPIYLGSVFGWDHSLVGGFLALWVIAYGFVQGFAPKITGKKEGRTPDGRAALHWVALLTIVTGIIAYLVQV
EWQAEYTIVIGLLMFGAVFAVNSSLHSYLIVSYAKGDGVSVDVGFYYMANAMGRLIGTILSGLVFQVAGFAACLWVSFGF
LLLSTLISIKLPKNTE

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45634; Mature: 45634

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure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EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA