Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is mtlR [H]

Identifier: 209696219

GI number: 209696219

Start: 3049551

End: 3050081

Strand: Direct

Name: mtlR [H]

Synonym: VSAL_I2815

Alternate gene names: 209696219

Gene position: 3049551-3050081 (Clockwise)

Preceding gene: 209696218

Following gene: 209696224

Centisome position: 91.71

GC content: 36.91

Gene sequence:

>531_bases
ATGACAGAAGTAATAAACGAATCTAACATCATTGAACGACTAGACGATGCACCTTCTGTGCGTGGTTTTTTCATCATTGC
TGTCGATATTCTTAATGAGTCTATCGACGGGTTAATCCAACGTATTTTTCGTAAAGATGACTTCGCAGTTCAATCCGTGA
TCGGCCCATTACTCCAAGATTCAGGTCCACTCGGCGATTTAAACGTAAGGTTAAAGCTTCTTTTTGGCTTAGGTGTATTA
CCCAATAATACCTATCATGATATTGAAGGCTTAATTCAACTTCGTAATAAATTAAACGCTGAAATGAATGAATTTCAATT
TACCGATCCACAAGTAATCACACCGATAAACTCACTTCATTTAGTTAAAAGAATGGGAATGCTCCAACTAGAAATCACCC
CAATGAATGACGACACCGACCTGATGTTCTATCAAATGCAAATAGATCGACAAAAACAAATGATCCGTTCTGGTCTGTCA
TTAGCAATTGTCGATATTTGTGCAGAATTACAGAAAGAAAGTCCATTTTAA

Upstream 100 bases:

>100_bases
AACAGTTCAGAAGCGAAAAAGATTGAAGCAATCTTTACGACATTAAACTAATAAGAAACAGTTAGAGAGGCGTAATGCCT
CTCTCTTTTATGGCTATTTT

Downstream 100 bases:

>100_bases
TGATTTAATCTCTATTAACGTCATTCTGTATTTTTAGGTAATTTAATTGATATCAGCGTAGATAGAAGCAAGAAACCGAA
AGATACCCACAAACACGCTG

Product: mannitol repressor protein

Products: NA

Alternate protein names: Mannitol repressor protein [H]

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MTEVINESNIIERLDDAPSVRGFFIIAVDILNESIDGLIQRIFRKDDFAVQSVIGPLLQDSGPLGDLNVRLKLLFGLGVL
PNNTYHDIEGLIQLRNKLNAEMNEFQFTDPQVITPINSLHLVKRMGMLQLEITPMNDDTDLMFYQMQIDRQKQMIRSGLS
LAIVDICAELQKESPF

Sequences:

>Translated_176_residues
MTEVINESNIIERLDDAPSVRGFFIIAVDILNESIDGLIQRIFRKDDFAVQSVIGPLLQDSGPLGDLNVRLKLLFGLGVL
PNNTYHDIEGLIQLRNKLNAEMNEFQFTDPQVITPINSLHLVKRMGMLQLEITPMNDDTDLMFYQMQIDRQKQMIRSGLS
LAIVDICAELQKESPF
>Mature_175_residues
TEVINESNIIERLDDAPSVRGFFIIAVDILNESIDGLIQRIFRKDDFAVQSVIGPLLQDSGPLGDLNVRLKLLFGLGVLP
NNTYHDIEGLIQLRNKLNAEMNEFQFTDPQVITPINSLHLVKRMGMLQLEITPMNDDTDLMFYQMQIDRQKQMIRSGLSL
AIVDICAELQKESPF

Specific function: Acts as a repressor of the mtlAD operon [H]

COG id: COG3722

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yggD [H]

Homologues:

Organism=Escherichia coli, GI1790029, Length=170, Percent_Identity=40, Blast_Score=138, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007761 [H]

Pfam domain/function: PF05068 MtlR [H]

EC number: NA

Molecular weight: Translated: 19990; Mature: 19858

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEVINESNIIERLDDAPSVRGFFIIAVDILNESIDGLIQRIFRKDDFAVQSVIGPLLQD
CCCCCCCHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
SGPLGDLNVRLKLLFGLGVLPNNTYHDIEGLIQLRNKLNAEMNEFQFTDPQVITPINSLH
CCCCCCHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCEECCHHHHH
LVKRMGMLQLEITPMNDDTDLMFYQMQIDRQKQMIRSGLSLAIVDICAELQKESPF
HHHHCCCEEEEEECCCCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TEVINESNIIERLDDAPSVRGFFIIAVDILNESIDGLIQRIFRKDDFAVQSVIGPLLQD
CCCCCCHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
SGPLGDLNVRLKLLFGLGVLPNNTYHDIEGLIQLRNKLNAEMNEFQFTDPQVITPINSLH
CCCCCCHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCEECCHHHHH
LVKRMGMLQLEITPMNDDTDLMFYQMQIDRQKQMIRSGLSLAIVDICAELQKESPF
HHHHCCCEEEEEECCCCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]