| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is mtlD
Identifier: 209696218
GI number: 209696218
Start: 3048353
End: 3049501
Strand: Direct
Name: mtlD
Synonym: VSAL_I2814
Alternate gene names: 209696218
Gene position: 3048353-3049501 (Clockwise)
Preceding gene: 209696217
Following gene: 209696219
Centisome position: 91.68
GC content: 39.77
Gene sequence:
>1149_bases ATGAAAGCAGTACATTTTGGCGCAGGTAATATCGGTCGTGGTTTTATTGGTAAAGTTCTTTCTGATTCAAACGTCGCTGT TACATTCGCAGACGTTGATGCACCGTTAGTTGATCAACTTTGTCATGACCAATCATACAAAGTAAAAGTCGTTGGGTCTA AATGCCAAATCGACACAGTTACTCATGTAACTGCCGTAAACTCAACCAGTGACGATGTTATTGAGCGTATTGTACACACC GATTTAGTGACAACCGCCGTTGGCCCTAACGTATTAAATATTATTGCAAAAACCATTGCAAAAGGGTTAACCAAACGTTT TGAAGCCAACAATGAATCACCACTTAATATCATTGCTTGTGAAAATATGGTTCGAGGTACTACTCACCTTAAAAATGAAG TGTACTCTCATCTTGACGACTCTTTTCATGCACGTTGTGACGAATTAGTTGGTTTTGTTGATTCTGCGGTTGACCGTATT GTTCCACCATCAGAAGCGGCCAATGACGATTTACTTGAAGTTACCGTTGAAAGTTTCAGTGAATGGATTGTTGATGAAAA ACAATTCAAAGGTGGCGTACCTAATATTGCTGGAATGGAAAAAACAGACAACCTAATGGCGTTTGTTGAGCGCAAACTCT TCACTTTAAATACGGGTCATTGCATTACGGCTTATCTTGGTGCATTAAAAGGCCATGAGACCGTACGTGACGCGATTCAA GACCCTGAAATTAGAACCGAAGTAAAAGCCGCAATGGAAGAAAGTGGTGAAGTGCTCATTCGTCGCTACGGTTTTGATAA AGAATTACATGCTGCCTATATCGAAAAAATCTTAGGCCGATTTGCGAATCCGTATTTACGAGATGAGATTGATCGCGTTG CCCGTCAGCCAATTCGTAAATTAGGTGAAAATGATCGCCTAATCAAACCGTTATTAGGTACAATCGAATACGGAATTGAA AATAAAACACTATTAAAAGGCATCGCTGCCGCATTTAAATACGTAAATGACACAGATCCACAAGCAGTCGAGCTACAAAC TCACTTACAGGAATCTGGCTTAAAAGCGACATTAGCGCATTACACCGGATTAAATGAAAACAGTTCAGAAGCGAAAAAGA TTGAAGCAATCTTTACGACATTAAACTAA
Upstream 100 bases:
>100_bases TTCAGGCGAACAAGCAGCATAAGTATTTAGTACCAATAAGAAGTCAGCTTTACCCCTATAGGGCTGGCTTCCTCCTAATA TAAAATTGAAGGTAATTATT
Downstream 100 bases:
>100_bases TAAGAAACAGTTAGAGAGGCGTAATGCCTCTCTCTTTTATGGCTATTTTATGACAGAAGTAATAAACGAATCTAACATCA TTGAACGACTAGACGATGCA
Product: mannitol-1-phosphate 5-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MKAVHFGAGNIGRGFIGKVLSDSNVAVTFADVDAPLVDQLCHDQSYKVKVVGSKCQIDTVTHVTAVNSTSDDVIERIVHT DLVTTAVGPNVLNIIAKTIAKGLTKRFEANNESPLNIIACENMVRGTTHLKNEVYSHLDDSFHARCDELVGFVDSAVDRI VPPSEAANDDLLEVTVESFSEWIVDEKQFKGGVPNIAGMEKTDNLMAFVERKLFTLNTGHCITAYLGALKGHETVRDAIQ DPEIRTEVKAAMEESGEVLIRRYGFDKELHAAYIEKILGRFANPYLRDEIDRVARQPIRKLGENDRLIKPLLGTIEYGIE NKTLLKGIAAAFKYVNDTDPQAVELQTHLQESGLKATLAHYTGLNENSSEAKKIEAIFTTLN
Sequences:
>Translated_382_residues MKAVHFGAGNIGRGFIGKVLSDSNVAVTFADVDAPLVDQLCHDQSYKVKVVGSKCQIDTVTHVTAVNSTSDDVIERIVHT DLVTTAVGPNVLNIIAKTIAKGLTKRFEANNESPLNIIACENMVRGTTHLKNEVYSHLDDSFHARCDELVGFVDSAVDRI VPPSEAANDDLLEVTVESFSEWIVDEKQFKGGVPNIAGMEKTDNLMAFVERKLFTLNTGHCITAYLGALKGHETVRDAIQ DPEIRTEVKAAMEESGEVLIRRYGFDKELHAAYIEKILGRFANPYLRDEIDRVARQPIRKLGENDRLIKPLLGTIEYGIE NKTLLKGIAAAFKYVNDTDPQAVELQTHLQESGLKATLAHYTGLNENSSEAKKIEAIFTTLN >Mature_382_residues MKAVHFGAGNIGRGFIGKVLSDSNVAVTFADVDAPLVDQLCHDQSYKVKVVGSKCQIDTVTHVTAVNSTSDDVIERIVHT DLVTTAVGPNVLNIIAKTIAKGLTKRFEANNESPLNIIACENMVRGTTHLKNEVYSHLDDSFHARCDELVGFVDSAVDRI VPPSEAANDDLLEVTVESFSEWIVDEKQFKGGVPNIAGMEKTDNLMAFVERKLFTLNTGHCITAYLGALKGHETVRDAIQ DPEIRTEVKAAMEESGEVLIRRYGFDKELHAAYIEKILGRFANPYLRDEIDRVARQPIRKLGENDRLIKPLLGTIEYGIE NKTLLKGIAAAFKYVNDTDPQAVELQTHLQESGLKATLAHYTGLNENSSEAKKIEAIFTTLN
Specific function: Unknown
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1790028, Length=368, Percent_Identity=64.6739130434783, Blast_Score=486, Evalue=1e-138, Organism=Escherichia coli, GI1790779, Length=281, Percent_Identity=27.4021352313167, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1788497, Length=289, Percent_Identity=27.681660899654, Blast_Score=86, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6324401, Length=249, Percent_Identity=26.1044176706827, Blast_Score=77, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6320765, Length=249, Percent_Identity=26.1044176706827, Blast_Score=77, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MTLD_ALISL (B6EN80)
Other databases:
- EMBL: FM178379 - RefSeq: YP_002264148.1 - ProteinModelPortal: B6EN80 - GeneID: 6988854 - GenomeReviews: FM178379_GR - KEGG: vsa:VSAL_I2814 - HOGENOM: HBG568825 - OMA: FTVNTGH - ProtClustDB: PRK02318 - HAMAP: MF_00196 - InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR023028 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR023027 - InterPro: IPR013131 - InterPro: IPR016040 - Gene3D: G3DSA:3.40.50.720 - Gene3D: G3DSA:1.10.1040.10 - PRINTS: PR00084
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C; SSF48179 6DGDH_C_like
EC number: =1.1.1.17
Molecular weight: Translated: 42107; Mature: 42107
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS00974 MANNITOL_DHGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVHFGAGNIGRGFIGKVLSDSNVAVTFADVDAPLVDQLCHDQSYKVKVVGSKCQIDTV CCEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCEEEEECCCEEEEEE THVTAVNSTSDDVIERIVHTDLVTTAVGPNVLNIIAKTIAKGLTKRFEANNESPLNIIAC EEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC ENMVRGTTHLKNEVYSHLDDSFHARCDELVGFVDSAVDRIVPPSEAANDDLLEVTVESFS CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH EWIVDEKQFKGGVPNIAGMEKTDNLMAFVERKLFTLNTGHCITAYLGALKGHETVRDAIQ HHHHCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHC DPEIRTEVKAAMEESGEVLIRRYGFDKELHAAYIEKILGRFANPYLRDEIDRVARQPIRK CCHHHHHHHHHHHCCCCEEEHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LGENDRLIKPLLGTIEYGIENKTLLKGIAAAFKYVNDTDPQAVELQTHLQESGLKATLAH HCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHH YTGLNENSSEAKKIEAIFTTLN HCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKAVHFGAGNIGRGFIGKVLSDSNVAVTFADVDAPLVDQLCHDQSYKVKVVGSKCQIDTV CCEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCEEEEECCCEEEEEE THVTAVNSTSDDVIERIVHTDLVTTAVGPNVLNIIAKTIAKGLTKRFEANNESPLNIIAC EEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC ENMVRGTTHLKNEVYSHLDDSFHARCDELVGFVDSAVDRIVPPSEAANDDLLEVTVESFS CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH EWIVDEKQFKGGVPNIAGMEKTDNLMAFVERKLFTLNTGHCITAYLGALKGHETVRDAIQ HHHHCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHC DPEIRTEVKAAMEESGEVLIRRYGFDKELHAAYIEKILGRFANPYLRDEIDRVARQPIRK CCHHHHHHHHHHHCCCCEEEHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LGENDRLIKPLLGTIEYGIENKTLLKGIAAAFKYVNDTDPQAVELQTHLQESGLKATLAH HCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHH YTGLNENSSEAKKIEAIFTTLN HCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA