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The map label for this gene is yibP [H]

Identifier: 209696210

GI number: 209696210

Start: 3035259

End: 3036404

Strand: Direct

Name: yibP [H]

Synonym: VSAL_I2804

Alternate gene names: 209696210

Gene position: 3035259-3036404 (Clockwise)

Preceding gene: 209696205

Following gene: 209696212

Centisome position: 91.28

GC content: 40.05

Gene sequence:

>1146_bases
ATGAACATATACTCTTTAACTAAGCCTTTTTCTTGTCGTCAATTCTGTACGACAGCTTTACTGTGCCTGATGATTTCAAT
CCCTGCGACAGCTCATGCAAATGACGCAGAGTTAAAAGGAATGAAACAAGAAATATCTCGTCAAAGCACAGTATTAAACA
AACAGAAAAAAGAGTTATCTAGCCTTCAAAGAAGTCTTAAAAAACACGAAGTCTCTATTGCGAGTGCCTCGACTAAAATC
CGTAACGCAGAAAGTGAATTATCAAGCCTAAAACAATCGATAACGACACTTAAGCAACAACAATCTGAATTGACTCAACA
ACAGATTGGACAGACAGAAGTACTCAAAGACCTGCTCGTTAACTATTATCTCATCAGTCGAAATAATCAACTGTCTAACG
TTCTCAGTGGTGATGACGTGACAAAAATTGACCGCATGACTCAATATGCACAACGATTATCAGAAGCTCGTGTCGGCGCT
ATTTCTCAACTTGAATTTACAACCGTACAACTTGAGGAAAAAGAAGCTGCCCTCATTAAGCAGCAGCAGCGTCAAAGTGA
GTTAGTCGCTCAATATAAAAAAGAGAAATCGACCCTACAAGGTTCTCAGAATAAACGTCAACAAACCGTTTCAAGTATCA
AAAAACGTATTTCAAATGAAAACGGATACTTAAATGAGCTTCAACAAAATGAAAAACGTTTAAAAGTTGCCATCGCAAAA
GCAAAAGCCCAAAACAATGTACCGATGGATGGATTAGCCCGTCAAAAAGGTCGTCTACCTTGGCCTGTGAGTGGTGCAAA
AACATTGCACAGCTTTGGTACTAAACAAACAGGACAATTAACCTGGAAAGGAATGGTTCTTGCGAGTGATTACGGCCAAC
CCGTAAAAGCGGTCTACTCTGGTAAAGTGGTCTTTGCTGATTGGTTACGTGGCTATGGTTTGATGGTATTGATTGATCAC
GGTAAAGGTGACATGACGCTATATGGTTACAACCAAAGTTTAATGAAGAAAGAAGGCGATAAAGTGAAAGCGGGAGAAAC
CATTGCGGTGGTTGGTGATAGTGGTGGTCAAGACAGACCTTCATTGTACTTTGAAATCCGTCGTAACAGTAAAGCACAAA
ACCCCCGTTCTTGGTTAAGACGCTAA

Upstream 100 bases:

>100_bases
CAGCGTTATACAAAGAAAATGCTGTGATATTGGTTTTACAATTGAGACCAAACACCAACTCTGCCTAGTCAGAGTCCCCT
CTATCTGAAATAATGCAACG

Downstream 100 bases:

>100_bases
TAGAAAAAATTTATCCATTAAAAAAGCCGCGTTATCGACGTCTATTTATAGAGAGTGATCACGCGGCTTTTTTTATTTCA
TTATTTCAATGTTTTATTCG

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MNIYSLTKPFSCRQFCTTALLCLMISIPATAHANDAELKGMKQEISRQSTVLNKQKKELSSLQRSLKKHEVSIASASTKI
RNAESELSSLKQSITTLKQQQSELTQQQIGQTEVLKDLLVNYYLISRNNQLSNVLSGDDVTKIDRMTQYAQRLSEARVGA
ISQLEFTTVQLEEKEAALIKQQQRQSELVAQYKKEKSTLQGSQNKRQQTVSSIKKRISNENGYLNELQQNEKRLKVAIAK
AKAQNNVPMDGLARQKGRLPWPVSGAKTLHSFGTKQTGQLTWKGMVLASDYGQPVKAVYSGKVVFADWLRGYGLMVLIDH
GKGDMTLYGYNQSLMKKEGDKVKAGETIAVVGDSGGQDRPSLYFEIRRNSKAQNPRSWLRR

Sequences:

>Translated_381_residues
MNIYSLTKPFSCRQFCTTALLCLMISIPATAHANDAELKGMKQEISRQSTVLNKQKKELSSLQRSLKKHEVSIASASTKI
RNAESELSSLKQSITTLKQQQSELTQQQIGQTEVLKDLLVNYYLISRNNQLSNVLSGDDVTKIDRMTQYAQRLSEARVGA
ISQLEFTTVQLEEKEAALIKQQQRQSELVAQYKKEKSTLQGSQNKRQQTVSSIKKRISNENGYLNELQQNEKRLKVAIAK
AKAQNNVPMDGLARQKGRLPWPVSGAKTLHSFGTKQTGQLTWKGMVLASDYGQPVKAVYSGKVVFADWLRGYGLMVLIDH
GKGDMTLYGYNQSLMKKEGDKVKAGETIAVVGDSGGQDRPSLYFEIRRNSKAQNPRSWLRR
>Mature_381_residues
MNIYSLTKPFSCRQFCTTALLCLMISIPATAHANDAELKGMKQEISRQSTVLNKQKKELSSLQRSLKKHEVSIASASTKI
RNAESELSSLKQSITTLKQQQSELTQQQIGQTEVLKDLLVNYYLISRNNQLSNVLSGDDVTKIDRMTQYAQRLSEARVGA
ISQLEFTTVQLEEKEAALIKQQQRQSELVAQYKKEKSTLQGSQNKRQQTVSSIKKRISNENGYLNELQQNEKRLKVAIAK
AKAQNNVPMDGLARQKGRLPWPVSGAKTLHSFGTKQTGQLTWKGMVLASDYGQPVKAVYSGKVVFADWLRGYGLMVLIDH
GKGDMTLYGYNQSLMKKEGDKVKAGETIAVVGDSGGQDRPSLYFEIRRNSKAQNPRSWLRR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=416, Percent_Identity=33.1730769230769, Blast_Score=222, Evalue=4e-59,
Organism=Escherichia coli, GI1789099, Length=120, Percent_Identity=36.6666666666667, Blast_Score=78, Evalue=8e-16,
Organism=Escherichia coli, GI87082174, Length=122, Percent_Identity=34.4262295081967, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 42766; Mature: 42766

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIYSLTKPFSCRQFCTTALLCLMISIPATAHANDAELKGMKQEISRQSTVLNKQKKELS
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SLQRSLKKHEVSIASASTKIRNAESELSSLKQSITTLKQQQSELTQQQIGQTEVLKDLLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
NYYLISRNNQLSNVLSGDDVTKIDRMTQYAQRLSEARVGAISQLEFTTVQLEEKEAALIK
HHHEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEEECHHHHHHHH
QQQRQSELVAQYKKEKSTLQGSQNKRQQTVSSIKKRISNENGYLNELQQNEKRLKVAIAK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AKAQNNVPMDGLARQKGRLPWPVSGAKTLHSFGTKQTGQLTWKGMVLASDYGQPVKAVYS
HHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHC
GKVVFADWLRGYGLMVLIDHGKGDMTLYGYNQSLMKKEGDKVKAGETIAVVGDSGGQDRP
CCCHHHHHHHCCCEEEEEECCCCCEEEEECCHHHHHCCCCCEECCCEEEEEECCCCCCCC
SLYFEIRRNSKAQNPRSWLRR
CEEEEEECCCCCCCHHHHHCC
>Mature Secondary Structure
MNIYSLTKPFSCRQFCTTALLCLMISIPATAHANDAELKGMKQEISRQSTVLNKQKKELS
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SLQRSLKKHEVSIASASTKIRNAESELSSLKQSITTLKQQQSELTQQQIGQTEVLKDLLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
NYYLISRNNQLSNVLSGDDVTKIDRMTQYAQRLSEARVGAISQLEFTTVQLEEKEAALIK
HHHEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEEECHHHHHHHH
QQQRQSELVAQYKKEKSTLQGSQNKRQQTVSSIKKRISNENGYLNELQQNEKRLKVAIAK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AKAQNNVPMDGLARQKGRLPWPVSGAKTLHSFGTKQTGQLTWKGMVLASDYGQPVKAVYS
HHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHC
GKVVFADWLRGYGLMVLIDHGKGDMTLYGYNQSLMKKEGDKVKAGETIAVVGDSGGQDRP
CCCHHHHHHHCCCEEEEEECCCCCEEEEECCHHHHHCCCCCEECCCEEEEEECCCCCCCC
SLYFEIRRNSKAQNPRSWLRR
CEEEEEECCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]