| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is cysE [H]
Identifier: 209696206
GI number: 209696206
Start: 3031953
End: 3032774
Strand: Reverse
Name: cysE [H]
Synonym: VSAL_I2800
Alternate gene names: 209696206
Gene position: 3032774-3031953 (Counterclockwise)
Preceding gene: 209696207
Following gene: 209696202
Centisome position: 91.21
GC content: 45.99
Gene sequence:
>822_bases ATGAATGAATGTAAGAAACACAAAGTATGGGAAAAAATTGTTCAGGAAGCGCGCGAGCAATCTGAGCAAGAACCCATACT TGCAAGCTTTTATCATGCCACCATCATTAAACATGAAAATTTAGCGGCGTCGTTAAGTTACATTCTTGCGAATAAATTAG CCACGGCTTCAATGCCTGCGATGGCGGTTCGTGAAGTGGTGGAAGAGGCGTTCGCCTCCGACCCAAGTATTACGGATGCG GCCGCGTGCGATATTTGTGCGACGGTAACTCGAGATCCTGCGGTTTCAATGTACTCAATGCCTTTATTGTACTTAAAAGG GTATCACGCGCTGCAAGGTTATCGTGTTTCAAACTGGCTATGGAAACAAGGACGAATAGCGTTAGCAACCTACTTACAGA ATGAAATTTCTGTTGCATGCCAAGTGGATGTTCACCCTGCGGCTACCATTGGTAAAGGGATCATGTTTGACCATGCTACG GGCATTGTTATCGGCGAAACGGCTGTGGTTGAGAACGATGTTTCTATCCTTCAAGACGTAACGCTAGGTGGTACTGGCAA AGAGTGTGGTGATCGTCATCCTAAGATCCGTCAAGGGGTTATGATTGGTGCAGGCGCTAAGATTTTAGGTAATATTGAAG TTGGTGTCGGTGCGAAGATTGGTTCGTGTTCTGTTGTGCTTCAAGCGGTTCCACCTCATACGACAGTGGCAGGGGTTCCG GCCAAAATTGTGGGTCGCCCTAGTTCAGAGATGCCGTCTCTAGATATGGATCAACAATTTAATGGTAAGTCTCAGACGTT TATGTCTGGTGATGGTATTTAA
Upstream 100 bases:
>100_bases TTATCAAGTATTGTATCAAGGGAAAGATGCAAGAGTTGCTGCGCAGGATTTATTAGCACGCGACAAAAAATCAGAATCGT AATTCAAGGATGGTATGAAG
Downstream 100 bases:
>100_bases TCTTAGAGTAAGTTAATTCATTCTATTGCGTGTTTATACCGACAAAAAAATAGCCACTTAATCGTGGCTATTTTTGTATT TGAACCGTGGGAAGTGAAAA
Product: serine acetyltransferase
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MNECKKHKVWEKIVQEAREQSEQEPILASFYHATIIKHENLAASLSYILANKLATASMPAMAVREVVEEAFASDPSITDA AACDICATVTRDPAVSMYSMPLLYLKGYHALQGYRVSNWLWKQGRIALATYLQNEISVACQVDVHPAATIGKGIMFDHAT GIVIGETAVVENDVSILQDVTLGGTGKECGDRHPKIRQGVMIGAGAKILGNIEVGVGAKIGSCSVVLQAVPPHTTVAGVP AKIVGRPSSEMPSLDMDQQFNGKSQTFMSGDGI
Sequences:
>Translated_273_residues MNECKKHKVWEKIVQEAREQSEQEPILASFYHATIIKHENLAASLSYILANKLATASMPAMAVREVVEEAFASDPSITDA AACDICATVTRDPAVSMYSMPLLYLKGYHALQGYRVSNWLWKQGRIALATYLQNEISVACQVDVHPAATIGKGIMFDHAT GIVIGETAVVENDVSILQDVTLGGTGKECGDRHPKIRQGVMIGAGAKILGNIEVGVGAKIGSCSVVLQAVPPHTTVAGVP AKIVGRPSSEMPSLDMDQQFNGKSQTFMSGDGI >Mature_273_residues MNECKKHKVWEKIVQEAREQSEQEPILASFYHATIIKHENLAASLSYILANKLATASMPAMAVREVVEEAFASDPSITDA AACDICATVTRDPAVSMYSMPLLYLKGYHALQGYRVSNWLWKQGRIALATYLQNEISVACQVDVHPAATIGKGIMFDHAT GIVIGETAVVENDVSILQDVTLGGTGKECGDRHPKIRQGVMIGAGAKILGNIEVGVGAKIGSCSVVLQAVPPHTTVAGVP AKIVGRPSSEMPSLDMDQQFNGKSQTFMSGDGI
Specific function: Cysteine biosynthesis. [C]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790035, Length=265, Percent_Identity=71.6981132075472, Blast_Score=405, Evalue=1e-114, Organism=Escherichia coli, GI1788371, Length=104, Percent_Identity=35.5769230769231, Blast_Score=61, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018357 - InterPro: IPR010493 - InterPro: IPR005881 - InterPro: IPR011004 [H]
Pfam domain/function: PF06426 SATase_N [H]
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 29210; Mature: 29210
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNECKKHKVWEKIVQEAREQSEQEPILASFYHATIIKHENLAASLSYILANKLATASMPA CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCHH MAVREVVEEAFASDPSITDAAACDICATVTRDPAVSMYSMPLLYLKGYHALQGYRVSNWL HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHCCEEHHHHH WKQGRIALATYLQNEISVACQVDVHPAATIGKGIMFDHATGIVIGETAVVENDVSILQDV HCCCCEEEHHHHHCCCEEEEEEECCCHHHHCCCEEEECCCCEEECCCEEECCCHHHHHHH TLGGTGKECGDRHPKIRQGVMIGAGAKILGNIEVGVGAKIGSCSVVLQAVPPHTTVAGVP CCCCCCCHHCCCCCHHHCCEEEECCCEEEEEEEECCCCCCCCEEEEEEECCCCCEECCCC AKIVGRPSSEMPSLDMDQQFNGKSQTFMSGDGI HHEECCCCCCCCCCCCCCCCCCCCCEEECCCCC >Mature Secondary Structure MNECKKHKVWEKIVQEAREQSEQEPILASFYHATIIKHENLAASLSYILANKLATASMPA CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCHH MAVREVVEEAFASDPSITDAAACDICATVTRDPAVSMYSMPLLYLKGYHALQGYRVSNWL HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHCCEEHHHHH WKQGRIALATYLQNEISVACQVDVHPAATIGKGIMFDHATGIVIGETAVVENDVSILQDV HCCCCEEEHHHHHCCCEEEEEEECCCHHHHCCCEEEECCCCEEECCCEEECCCHHHHHHH TLGGTGKECGDRHPKIRQGVMIGAGAKILGNIEVGVGAKIGSCSVVLQAVPPHTTVAGVP CCCCCCCHHCCCCCHHHCCEEEECCCEEEEEEEECCCCCCCCEEEEEEECCCCCEECCCC AKIVGRPSSEMPSLDMDQQFNGKSQTFMSGDGI HHEECCCCCCCCCCCCCCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]