| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is cpxA [H]
Identifier: 209696204
GI number: 209696204
Start: 3029888
End: 3031276
Strand: Direct
Name: cpxA [H]
Synonym: VSAL_I2798
Alternate gene names: 209696204
Gene position: 3029888-3031276 (Clockwise)
Preceding gene: 209696203
Following gene: 209696205
Centisome position: 91.12
GC content: 41.68
Gene sequence:
>1389_bases GTGAAAAAGTACCTAACCTTTCCCCTACTCTCTAGTCTTTATGGCCGTATTTTTGCCATTTTTTGGCTGACACTGTTACT TGTTCTGATCGGCGTCGTTATTGGACCCAATTTTGATCCTCGTGATCGCCATGATATTGCCGCCGATCACCTCAGTAAAA TGACTCAAATTGCGGCATATATTACAGGGAAATACTCAGAGAGTGATGATCTTAAAGCCGCATTAAAAGAGATCAGTCAC AAAGCACACAATCACGACGAGAGCTTATCTCTATTTTTCACTACCCCAACAGGCGAGATATTAGATAAACCCAAAGAATT ACGAGGCAGAAAAAAAGCCTTATTAAATTTCTTAACCTTATCGGATGATCCCAAACTTCCACAACAGAAATTGTATGCAA GAACCATGATGGCTGGCCCATTTGATATCATTATCGCAAAAGAAACGGTTTATATGTACGTCGGACGCTATTGGAAAAAG CCTCCCCCTTTTATTCTTCGAATTCTTGATAAACCAATACAATTACTGCTTGTCACCATGCTAATTAGTACCCCCTTTCT GCTTTGGCTTGCATGGGCATTAAGCCAACCAGCAAGACGATTACAAAAAGCCGCTGAACGCGTTGCTAAAGGTCAATTTG AACAAGATAAACGTTTAGAAAAAGGGCCTAAAGAATTCAGAAAAACAGGACAAAGCTTCAATCAAATGGTCGGTTCATTA AATACCATGATCTCTGGACAACAGCGCTTATTATCTGATATTTCTCACGAACTGAGATCCCCACTGACTCGACTACGAAT GGCAACCGCGCTTGCCACTCGAAAACAAGGGGAAAGCTCAGAACTATCACGTATCGATATGGAAGCAGAGCGCCTTGAGC AAATGATATCGGAACTATTAGAGTTGTCTCGAATTCAAGTAAATAGCCATCAAGAACGAGAAGAAACAGACGCGTACTCA CTGTGGTTTGATATTTTAGAAGACGCAAAATTTGAAGCGGAACACTTAAACAAAAATCTTACTTATTCGGGCCTTGAAGA AATCGCCGTTTTTGGTAATCCAAACCTGTTAATGAGTGCGGTAGAAAACGTGATTCGAAATGCCATTAAGTATGGCAATG ACATCATCACGATTAATTTAACGGAAAACCAAAAAACCATCACCATTCACGTGGATGATAATGGCGAAGGGGTCCCCGAT GATGAGCTACAAGACATTTTCAAGCCTTTCTACCGAGTATCTACCGCCCGTGATAGAAGCAGCGGCGGCACTGGTTTGGG ACTCGCAATAACAGAAAGTGCGATTCGCCAGCACAACGGGACAATACTCGCGAGTAAAAGTCCTCTAGGTGGATTGCGAA TGACAATATCTTTACCGATATCTCATTAA
Upstream 100 bases:
>100_bases TCTCTAATCTCAGAAAAAAATTGCCTCCATTAGCTGAAGGAAAACCACGAATTAAAACACTCCGTGGTCGTGGCTACTTA TTTGTTGAGGAATAAATAAG
Downstream 100 bases:
>100_bases TTTAGAGGTAGATGCCTATCTCTCTTAAAAGTGGATGAAAGATAAACACACCATGGATATACTGACACCACTTTCTATTT TATTAAGACAACATTATGTT
Product: two-component sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MKKYLTFPLLSSLYGRIFAIFWLTLLLVLIGVVIGPNFDPRDRHDIAADHLSKMTQIAAYITGKYSESDDLKAALKEISH KAHNHDESLSLFFTTPTGEILDKPKELRGRKKALLNFLTLSDDPKLPQQKLYARTMMAGPFDIIIAKETVYMYVGRYWKK PPPFILRILDKPIQLLLVTMLISTPFLLWLAWALSQPARRLQKAAERVAKGQFEQDKRLEKGPKEFRKTGQSFNQMVGSL NTMISGQQRLLSDISHELRSPLTRLRMATALATRKQGESSELSRIDMEAERLEQMISELLELSRIQVNSHQEREETDAYS LWFDILEDAKFEAEHLNKNLTYSGLEEIAVFGNPNLLMSAVENVIRNAIKYGNDIITINLTENQKTITIHVDDNGEGVPD DELQDIFKPFYRVSTARDRSSGGTGLGLAITESAIRQHNGTILASKSPLGGLRMTISLPISH
Sequences:
>Translated_462_residues MKKYLTFPLLSSLYGRIFAIFWLTLLLVLIGVVIGPNFDPRDRHDIAADHLSKMTQIAAYITGKYSESDDLKAALKEISH KAHNHDESLSLFFTTPTGEILDKPKELRGRKKALLNFLTLSDDPKLPQQKLYARTMMAGPFDIIIAKETVYMYVGRYWKK PPPFILRILDKPIQLLLVTMLISTPFLLWLAWALSQPARRLQKAAERVAKGQFEQDKRLEKGPKEFRKTGQSFNQMVGSL NTMISGQQRLLSDISHELRSPLTRLRMATALATRKQGESSELSRIDMEAERLEQMISELLELSRIQVNSHQEREETDAYS LWFDILEDAKFEAEHLNKNLTYSGLEEIAVFGNPNLLMSAVENVIRNAIKYGNDIITINLTENQKTITIHVDDNGEGVPD DELQDIFKPFYRVSTARDRSSGGTGLGLAITESAIRQHNGTILASKSPLGGLRMTISLPISH >Mature_462_residues MKKYLTFPLLSSLYGRIFAIFWLTLLLVLIGVVIGPNFDPRDRHDIAADHLSKMTQIAAYITGKYSESDDLKAALKEISH KAHNHDESLSLFFTTPTGEILDKPKELRGRKKALLNFLTLSDDPKLPQQKLYARTMMAGPFDIIIAKETVYMYVGRYWKK PPPFILRILDKPIQLLLVTMLISTPFLLWLAWALSQPARRLQKAAERVAKGQFEQDKRLEKGPKEFRKTGQSFNQMVGSL NTMISGQQRLLSDISHELRSPLTRLRMATALATRKQGESSELSRIDMEAERLEQMISELLELSRIQVNSHQEREETDAYS LWFDILEDAKFEAEHLNKNLTYSGLEEIAVFGNPNLLMSAVENVIRNAIKYGNDIITINLTENQKTITIHVDDNGEGVPD DELQDIFKPFYRVSTARDRSSGGTGLGLAITESAIRQHNGTILASKSPLGGLRMTISLPISH
Specific function: This protein is involved in several diverse cellular processes, such as the functioning of acetohydroxyacid synthetase I, in the biosynthesis of isoleucine and valine, the TraJ protein activation activity for tra gene expression in F plasmid, and the synt
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790346, Length=456, Percent_Identity=43.2017543859649, Blast_Score=311, Evalue=6e-86, Organism=Escherichia coli, GI1787894, Length=335, Percent_Identity=28.6567164179104, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1788393, Length=277, Percent_Identity=31.0469314079422, Blast_Score=125, Evalue=7e-30, Organism=Escherichia coli, GI1789808, Length=266, Percent_Identity=30.0751879699248, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1786783, Length=301, Percent_Identity=26.578073089701, Blast_Score=101, Evalue=9e-23, Organism=Escherichia coli, GI87082128, Length=295, Percent_Identity=27.1186440677966, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1786600, Length=230, Percent_Identity=26.0869565217391, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1790436, Length=219, Percent_Identity=28.310502283105, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI145693157, Length=250, Percent_Identity=26.8, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1787374, Length=302, Percent_Identity=26.8211920529801, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790861, Length=299, Percent_Identity=26.0869565217391, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1789403, Length=242, Percent_Identity=28.099173553719, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1786912, Length=224, Percent_Identity=28.125, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1789149, Length=222, Percent_Identity=27.027027027027, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1788713, Length=234, Percent_Identity=24.3589743589744, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI1788549, Length=222, Percent_Identity=27.9279279279279, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI87081816, Length=115, Percent_Identity=30.4347826086957, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 52296; Mature: 52296
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYLTFPLLSSLYGRIFAIFWLTLLLVLIGVVIGPNFDPRDRHDIAADHLSKMTQIAAY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH ITGKYSESDDLKAALKEISHKAHNHDESLSLFFTTPTGEILDKPKELRGRKKALLNFLTL HHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHC SDDPKLPQQKLYARTMMAGPFDIIIAKETVYMYVGRYWKKPPPFILRILDKPIQLLLVTM CCCCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LISTPFLLWLAWALSQPARRLQKAAERVAKGQFEQDKRLEKGPKEFRKTGQSFNQMVGSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH NTMISGQQRLLSDISHELRSPLTRLRMATALATRKQGESSELSRIDMEAERLEQMISELL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ELSRIQVNSHQEREETDAYSLWFDILEDAKFEAEHLNKNLTYSGLEEIAVFGNPNLLMSA HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHCCCCCHHHHHH VENVIRNAIKYGNDIITINLTENQKTITIHVDDNGEGVPDDELQDIFKPFYRVSTARDRS HHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC SGGTGLGLAITESAIRQHNGTILASKSPLGGLRMTISLPISH CCCCCEEHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCC >Mature Secondary Structure MKKYLTFPLLSSLYGRIFAIFWLTLLLVLIGVVIGPNFDPRDRHDIAADHLSKMTQIAAY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH ITGKYSESDDLKAALKEISHKAHNHDESLSLFFTTPTGEILDKPKELRGRKKALLNFLTL HHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHC SDDPKLPQQKLYARTMMAGPFDIIIAKETVYMYVGRYWKKPPPFILRILDKPIQLLLVTM CCCCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LISTPFLLWLAWALSQPARRLQKAAERVAKGQFEQDKRLEKGPKEFRKTGQSFNQMVGSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH NTMISGQQRLLSDISHELRSPLTRLRMATALATRKQGESSELSRIDMEAERLEQMISELL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ELSRIQVNSHQEREETDAYSLWFDILEDAKFEAEHLNKNLTYSGLEEIAVFGNPNLLMSA HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHCCCCCHHHHHH VENVIRNAIKYGNDIITINLTENQKTITIHVDDNGEGVPDDELQDIFKPFYRVSTARDRS HHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC SGGTGLGLAITESAIRQHNGTILASKSPLGGLRMTISLPISH CCCCCEEHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]