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The map label for this gene is motX [H]

Identifier: 209696177

GI number: 209696177

Start: 3000998

End: 3001630

Strand: Reverse

Name: motX [H]

Synonym: VSAL_I2771

Alternate gene names: 209696177

Gene position: 3001630-3000998 (Counterclockwise)

Preceding gene: 209696178

Following gene: 209696175

Centisome position: 90.27

GC content: 42.81

Gene sequence:

>633_bases
ATGAAATTACGACATCTCGTCGTTGCGTGTATGGTGGCTTTAGCGCCAACGCATGCATCGACTAAAGAGATCGGAGAACC
GGTCCCGATCTATACCGAAGATCAATTATTTAGATTATTTGATACGAATTCACATTTAACGCGAGTTCAAAAAGTAGATA
ATTGCCAACTAGTTGAAGATATTGTCGCCCGTGCAACAAAAATAGATTCTCCAGCTTATGAATTCTTGTATGGAGATATG
TTGGCGTGGGGGGTTTGTGTTGACCGTGATGTAGAGCTTGGCCTCTATTATATGGAAAACGCAGCCAGACAAGGGTTACC
TGCCGCATTAGAGCAAATTGGACGATACTACTCTAAAGGCACCTTAGTTCAGCAAGACAGAGAAAGAGCGATACCTTACT
TACGTGAAGCCGCTGCAATGGGAAATCTTAATGCCCGTATTAGTTTAGCTGAGTTGCTTTTGAGTGATTATGGAAGTCCA
TTAGACTATGAAGATGCGTATCGATGGTTATACAATTCGGTTACGTCAGATGGGCGCAAACACCAACGCATTGCTAATCT
TCGTGATGGGTTAGAAATGCGAATGCCAGGAAATATCATTGCTAGAGCAAAGCGTCGAGATACGTTCTGGTAA

Upstream 100 bases:

>100_bases
TATAACTATGGGCAAAAACTTGCCACGAAAGGCAAATTTTGTCTAAAGATATTGCCGCTTACGTCGATATAATAAATACA
GTTATAAAGAGTTGATGAAT

Downstream 100 bases:

>100_bases
TGTAATTAAAATATTCGCATTAAGTTAATCTTAATGTAAACATCAGCTCTAAAAAAGCAGCATTGATAATATATCAATGC
TGCTTTTTGCATTTTTAAGA

Product: sodium-type polar flagellar protein MotX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKLRHLVVACMVALAPTHASTKEIGEPVPIYTEDQLFRLFDTNSHLTRVQKVDNCQLVEDIVARATKIDSPAYEFLYGDM
LAWGVCVDRDVELGLYYMENAARQGLPAALEQIGRYYSKGTLVQQDRERAIPYLREAAAMGNLNARISLAELLLSDYGSP
LDYEDAYRWLYNSVTSDGRKHQRIANLRDGLEMRMPGNIIARAKRRDTFW

Sequences:

>Translated_210_residues
MKLRHLVVACMVALAPTHASTKEIGEPVPIYTEDQLFRLFDTNSHLTRVQKVDNCQLVEDIVARATKIDSPAYEFLYGDM
LAWGVCVDRDVELGLYYMENAARQGLPAALEQIGRYYSKGTLVQQDRERAIPYLREAAAMGNLNARISLAELLLSDYGSP
LDYEDAYRWLYNSVTSDGRKHQRIANLRDGLEMRMPGNIIARAKRRDTFW
>Mature_210_residues
MKLRHLVVACMVALAPTHASTKEIGEPVPIYTEDQLFRLFDTNSHLTRVQKVDNCQLVEDIVARATKIDSPAYEFLYGDM
LAWGVCVDRDVELGLYYMENAARQGLPAALEQIGRYYSKGTLVQQDRERAIPYLREAAAMGNLNARISLAELLLSDYGSP
LDYEDAYRWLYNSVTSDGRKHQRIANLRDGLEMRMPGNIIARAKRRDTFW

Specific function: The power to drive the polar flagellar rotary motor of V.parahaemolyticus is derived from the transmembrane potential of sodium ions. Force is generated by the motor on coupling of the movement of ions across the membrane to rotation of the flagellum. Mot

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 Sel1-like repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 23963; Mature: 23963

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRHLVVACMVALAPTHASTKEIGEPVPIYTEDQLFRLFDTNSHLTRVQKVDNCQLVED
CCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHH
IVARATKIDSPAYEFLYGDMLAWGVCVDRDVELGLYYMENAARQGLPAALEQIGRYYSKG
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
TLVQQDRERAIPYLREAAAMGNLNARISLAELLLSDYGSPLDYEDAYRWLYNSVTSDGRK
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHH
HQRIANLRDGLEMRMPGNIIARAKRRDTFW
HHHHHHHHCCCEECCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MKLRHLVVACMVALAPTHASTKEIGEPVPIYTEDQLFRLFDTNSHLTRVQKVDNCQLVED
CCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHH
IVARATKIDSPAYEFLYGDMLAWGVCVDRDVELGLYYMENAARQGLPAALEQIGRYYSKG
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
TLVQQDRERAIPYLREAAAMGNLNARISLAELLLSDYGSPLDYEDAYRWLYNSVTSDGRK
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHH
HQRIANLRDGLEMRMPGNIIARAKRRDTFW
HHHHHHHHCCCEECCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7928960; 12620739 [H]