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The map label for this gene is nsrR

Identifier: 209696175

GI number: 209696175

Start: 2999153

End: 2999578

Strand: Reverse

Name: nsrR

Synonym: VSAL_I2769

Alternate gene names: 209696175

Gene position: 2999578-2999153 (Counterclockwise)

Preceding gene: 209696177

Following gene: 209696174

Centisome position: 90.21

GC content: 37.09

Gene sequence:

>426_bases
ATGCAACTTACAAACTTTACCGACTTTGGCCTTAGAGCCTTGATATACCTAGCTTCACTACCAAAAGGGGAGCTTACAAG
TATTACTGTTGTGACAGAAACTTTTGATGTCTCACGTAACCATATGGTCAAAATAATTAATAAATTAGGCCAAGAAGGGT
TCATAAAAACAGTAAGAGGCAAGAATGGAGGGATCTGTTTAGGTCGGCCAGCAGATCAGATTATTATTGGTGAAGTGATA
CGATCTATCGAGCCTTTTAACATTGTAAATTGCGCGCCCGAATTTTGTCATATTACCCCCGCGTGTCGTTTGAAAACGGC
ATTAGCTAAAGCAAAACAAGCGTTTTTAGATGAACTTGATCAGCATACAATTCAAGATATGTTGACAGAAAATAATGAAT
TATTGATTTTGTTAAAACGAGTGTAA

Upstream 100 bases:

>100_bases
AATGTAAAGTTGTATTTATAATGTATGTTATAAGTTGTATCTAAAATATATCTTTTAGTCAAGAGAAGAATTACAATGAA
AAAACAGGATAGGAGAGCAT

Downstream 100 bases:

>100_bases
TTACTGATACTTTCCTATCTGTTGTTTCTATACTCAGGTACAATTACCTTATTATCTCCTCTGACTAAGCAGGTCGCCTA
TGTCTAAGATTATTCAAAAC

Product: transcriptional repressor NsrR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MQLTNFTDFGLRALIYLASLPKGELTSITVVTETFDVSRNHMVKIINKLGQEGFIKTVRGKNGGICLGRPADQIIIGEVI
RSIEPFNIVNCAPEFCHITPACRLKTALAKAKQAFLDELDQHTIQDMLTENNELLILLKRV

Sequences:

>Translated_141_residues
MQLTNFTDFGLRALIYLASLPKGELTSITVVTETFDVSRNHMVKIINKLGQEGFIKTVRGKNGGICLGRPADQIIIGEVI
RSIEPFNIVNCAPEFCHITPACRLKTALAKAKQAFLDELDQHTIQDMLTENNELLILLKRV
>Mature_141_residues
MQLTNFTDFGLRALIYLASLPKGELTSITVVTETFDVSRNHMVKIINKLGQEGFIKTVRGKNGGICLGRPADQIIIGEVI
RSIEPFNIVNCAPEFCHITPACRLKTALAKAKQAFLDELDQHTIQDMLTENNELLILLKRV

Specific function: Nitric oxide-sensitive repressor of genes involved in protecting the cell against nitrosative stress. May require iron for activity

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain

Homologues:

Organism=Escherichia coli, GI1790621, Length=138, Percent_Identity=63.768115942029, Blast_Score=196, Evalue=7e-52,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NSRR_ALISL (B6EMP9)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002264105.1
- ProteinModelPortal:   B6EMP9
- GeneID:   6989140
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I2769
- HOGENOM:   HBG725923
- OMA:   ITNSCQF
- ProtClustDB:   PRK11014
- GO:   GO:0006350
- HAMAP:   MF_01177
- InterPro:   IPR000944
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- TIGRFAMs:   TIGR00738

Pfam domain/function: PF02082 Rrf2

EC number: NA

Molecular weight: Translated: 15724; Mature: 15724

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS01332 HTH_RRF2_1; PS51197 HTH_RRF2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTNFTDFGLRALIYLASLPKGELTSITVVTETFDVSRNHMVKIINKLGQEGFIKTVRG
CCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEECC
KNGGICLGRPADQIIIGEVIRSIEPFNIVNCAPEFCHITPACRLKTALAKAKQAFLDELD
CCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
QHTIQDMLTENNELLILLKRV
HHHHHHHHCCCCCEEEEEECC
>Mature Secondary Structure
MQLTNFTDFGLRALIYLASLPKGELTSITVVTETFDVSRNHMVKIINKLGQEGFIKTVRG
CCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEECC
KNGGICLGRPADQIIIGEVIRSIEPFNIVNCAPEFCHITPACRLKTALAKAKQAFLDELD
CCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
QHTIQDMLTENNELLILLKRV
HHHHHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA