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The map label for this gene is pilN

Identifier: 209696124

GI number: 209696124

Start: 2943727

End: 2944296

Strand: Direct

Name: pilN

Synonym: VSAL_I2717

Alternate gene names: NA

Gene position: 2943727-2944296 (Clockwise)

Preceding gene: 209696123

Following gene: 209696125

Centisome position: 88.53

GC content: 38.95

Gene sequence:

>570_bases
ATGGCTTACGAGATAAACTTGCTGTCTTGGCGAGATGAAAAAAGGCTTAAATATAAACAACGGTTTATAGCGATATTAGT
CTTGGCGGTTATTCTTTCGGTTTGTTTGCAGTGGGGTTTTGCTCGGTATTTGAATCATCAAGCTTCATTGCAAGATTCGC
GTAATAACTCATTAACTACCCACGTTACTTGGCTTAATAGTGAACTGAAGGGATTGGCAGAAATAGGAAAGCAGCATGAG
GCTATTTTGACTCGCTTAAAAGTTGTCGAGAATCTGCAGCAAAATAGAAATAAAACAACGCAAATTCTTAATATATTACC
GGAAGTGATTACTGAAGGTGTCTATTTAAACAAAATTAGAATGGATGCTCGCAGTATTGAAATGAAAGGGTTTAGTGACA
GTAATGCTCGATTGGCGACGATGCTGGATAAATTGGAACGGTCCACGCAGATTGTTGATGTCGAAATGCATTCGATTGTT
TCTGGGCAAACGATGTTTGGGCATGAAATGAGTCGTTTTGACGTGTCCTTTCGATTATTAGCCCCAAAGAAGAGGGTCAA
TAATGATTGA

Upstream 100 bases:

>100_bases
TATCGTCTCTTTTTTTTCAAGATAAAAAACGAGTGATGCCAATGGCTGTCAATGCAAGTCAATATGCGGTTGCTTTAGGT
CTGGCGTTGAGAGGGGTGTC

Downstream 100 bases:

>100_bases
TTGGCGTGAGTTAGATATAGATGAAATTACTGAGTGGCCATTGTTACCTCAGTTACTTGTCGTGTTTTTACTGTGCCTAT
GTGTGCATGCCGCAGGGTAT

Product: fimbrial assembly protein PilN

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilN; Type 4 Fimbrial Biogenesis Protein PilN; Type IV Pilus Assembly Protein PilN; Fimbrial Assembly Protein PilN; Tfp Pilus Assembly Protein PilN; Fimbrial Assembly Protein; Fimbrial Assembly; Periplasmic Sensor Signal Transduction Histidine Kinase; Tfp Pilus Assembly Protein; PilN Type IV Pilus Assembly Protein; Fimbrial Assembly Membrane Protein; Pili Assembly Protein PilN; Type IV Fimbrial Biogenesis Protein PilN; Type 4 Fimbrial Biogenesis Protein; Type IV Pilus Assembly Protein Piln

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MAYEINLLSWRDEKRLKYKQRFIAILVLAVILSVCLQWGFARYLNHQASLQDSRNNSLTTHVTWLNSELKGLAEIGKQHE
AILTRLKVVENLQQNRNKTTQILNILPEVITEGVYLNKIRMDARSIEMKGFSDSNARLATMLDKLERSTQIVDVEMHSIV
SGQTMFGHEMSRFDVSFRLLAPKKRVNND

Sequences:

>Translated_189_residues
MAYEINLLSWRDEKRLKYKQRFIAILVLAVILSVCLQWGFARYLNHQASLQDSRNNSLTTHVTWLNSELKGLAEIGKQHE
AILTRLKVVENLQQNRNKTTQILNILPEVITEGVYLNKIRMDARSIEMKGFSDSNARLATMLDKLERSTQIVDVEMHSIV
SGQTMFGHEMSRFDVSFRLLAPKKRVNND
>Mature_188_residues
AYEINLLSWRDEKRLKYKQRFIAILVLAVILSVCLQWGFARYLNHQASLQDSRNNSLTTHVTWLNSELKGLAEIGKQHEA
ILTRLKVVENLQQNRNKTTQILNILPEVITEGVYLNKIRMDARSIEMKGFSDSNARLATMLDKLERSTQIVDVEMHSIVS
GQTMFGHEMSRFDVSFRLLAPKKRVNND

Specific function: Unknown

COG id: COG3166

COG function: function code NU; Tfp pilus assembly protein PilN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21861; Mature: 21729

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYEINLLSWRDEKRLKYKQRFIAILVLAVILSVCLQWGFARYLNHQASLQDSRNNSLTT
CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCEEE
HVTWLNSELKGLAEIGKQHEAILTRLKVVENLQQNRNKTTQILNILPEVITEGVYLNKIR
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHH
MDARSIEMKGFSDSNARLATMLDKLERSTQIVDVEMHSIVSGQTMFGHEMSRFDVSFRLL
HHHHHHEECCCCCCCHHHHHHHHHHHHHHEEEEHHHHHHHCCCHHHHHHHHHHCEEEEEE
APKKRVNND
CCHHCCCCC
>Mature Secondary Structure 
AYEINLLSWRDEKRLKYKQRFIAILVLAVILSVCLQWGFARYLNHQASLQDSRNNSLTT
EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCEEE
HVTWLNSELKGLAEIGKQHEAILTRLKVVENLQQNRNKTTQILNILPEVITEGVYLNKIR
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHH
MDARSIEMKGFSDSNARLATMLDKLERSTQIVDVEMHSIVSGQTMFGHEMSRFDVSFRLL
HHHHHHEECCCCCCCHHHHHHHHHHHHHHEEEEHHHHHHHCCCHHHHHHHHHHCEEEEEE
APKKRVNND
CCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA