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The map label for this gene is pilO

Identifier: 209696125

GI number: 209696125

Start: 2944289

End: 2944870

Strand: Direct

Name: pilO

Synonym: VSAL_I2718

Alternate gene names: NA

Gene position: 2944289-2944870 (Clockwise)

Preceding gene: 209696124

Following gene: 209696126

Centisome position: 88.55

GC content: 37.11

Gene sequence:

>582_bases
ATGATTGATTGGCGTGAGTTAGATATAGATGAAATTACTGAGTGGCCATTGTTACCTCAGTTACTTGTCGTGTTTTTACT
GTGCCTATGTGTGCATGCCGCAGGGTATTGGTTTTGGTTATCACCGATTCACGAAAAAACAGAGCAATTAAAGAGAGACG
AATTAACGTTAAAAACAACCATCAAATATAAATACAATCAAGTCGCGGCAATGCCTGAAATGGAAGATCAATTAAATGAA
TTGAATTTACGTTATGAATTTTTAGCGCAGCAGCTTCCTGCGCAAAAAGAACTAGCGAGTATGTTGTCAGGGATCAATCA
AGTCGGAATTCAAAACAAACTTACGTTTACTCGTATTGATTGGGGAGAAAAACAGAATCAAGAATTTCTATATAAACTGC
CTCTAAATATCGAACTAACGGGGCAATATCATGATATCGGATCATTTTCAGAAGCAATTGCTGATCTCCCTCGAATTGTA
AGTTTGGAGAATATTGATATTCAACGAGTGAGTAAAGAGAGCAGTACATTGCACTTTCGAGTAATGGCTTATACCTATCA
ATTTAGGGGGATCCATGAATAG

Upstream 100 bases:

>100_bases
GAAATGCATTCGATTGTTTCTGGGCAAACGATGTTTGGGCATGAAATGAGTCGTTTTGACGTGTCCTTTCGATTATTAGC
CCCAAAGAAGAGGGTCAATA

Downstream 100 bases:

>100_bases
GCCATTATTCGTTATGCTCACTTTTCTTTTCGTGATAATAGGGTGCAAAGCAAACAAAGAGCCATTAAATGACTTTTATG
TAGAGGCCAAATTACAAGGC

Product: fimbrial assembly protein PilO

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilO; Type 4 Fimbrial Biogenesis Protein PilO; Fimbrial Assembly Protein PilO; Tfp Pilus Assembly Protein PilO; Type IV Pilus Assembly Protein PilO; Fimbrial Type-4 Assembly Transmembrane Protein; Pilus Assembly Protein; Fimbrial Type-4 Assembly Membrane Transmembrane Protein; Type IV Pilus Assembly Membrane Transmembrane Protein; Pilus Assembly Protein Pilo; PilO Type IV Pilus Assembly Protein; Fimbrial Type-IV Assembly Protein PilO; Fimbrial Assembly Protein; Pili Assembly Protein PilO; Type 4 Fimbrial Biogenesis Protein; Fimbrial Assembly Protein PilO-Like Protein

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MIDWRELDIDEITEWPLLPQLLVVFLLCLCVHAAGYWFWLSPIHEKTEQLKRDELTLKTTIKYKYNQVAAMPEMEDQLNE
LNLRYEFLAQQLPAQKELASMLSGINQVGIQNKLTFTRIDWGEKQNQEFLYKLPLNIELTGQYHDIGSFSEAIADLPRIV
SLENIDIQRVSKESSTLHFRVMAYTYQFRGIHE

Sequences:

>Translated_193_residues
MIDWRELDIDEITEWPLLPQLLVVFLLCLCVHAAGYWFWLSPIHEKTEQLKRDELTLKTTIKYKYNQVAAMPEMEDQLNE
LNLRYEFLAQQLPAQKELASMLSGINQVGIQNKLTFTRIDWGEKQNQEFLYKLPLNIELTGQYHDIGSFSEAIADLPRIV
SLENIDIQRVSKESSTLHFRVMAYTYQFRGIHE
>Mature_193_residues
MIDWRELDIDEITEWPLLPQLLVVFLLCLCVHAAGYWFWLSPIHEKTEQLKRDELTLKTTIKYKYNQVAAMPEMEDQLNE
LNLRYEFLAQQLPAQKELASMLSGINQVGIQNKLTFTRIDWGEKQNQEFLYKLPLNIELTGQYHDIGSFSEAIADLPRIV
SLENIDIQRVSKESSTLHFRVMAYTYQFRGIHE

Specific function: Unknown

COG id: COG3167

COG function: function code NU; Tfp pilus assembly protein PilO

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22708; Mature: 22708

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDWRELDIDEITEWPLLPQLLVVFLLCLCVHAAGYWFWLSPIHEKTEQLKRDELTLKTT
CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCHHEEECHHHHHHHHHHHHCEEEEEE
IKYKYNQVAAMPEMEDQLNELNLRYEFLAQQLPAQKELASMLSGINQVGIQNKLTFTRID
EEEEHHHHCCCCCHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEC
WGEKQNQEFLYKLPLNIELTGQYHDIGSFSEAIADLPRIVSLENIDIQRVSKESSTLHFR
CCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHEEECCCCHHHHCCCCCEEEEE
VMAYTYQFRGIHE
EEEEEEECCCCCC
>Mature Secondary Structure
MIDWRELDIDEITEWPLLPQLLVVFLLCLCVHAAGYWFWLSPIHEKTEQLKRDELTLKTT
CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCHHEEECHHHHHHHHHHHHCEEEEEE
IKYKYNQVAAMPEMEDQLNELNLRYEFLAQQLPAQKELASMLSGINQVGIQNKLTFTRID
EEEEHHHHCCCCCHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEC
WGEKQNQEFLYKLPLNIELTGQYHDIGSFSEAIADLPRIVSLENIDIQRVSKESSTLHFR
CCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHEEECCCCHHHHCCCCCEEEEE
VMAYTYQFRGIHE
EEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA