Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209696118

Identifier: 209696118

GI number: 209696118

Start: 2936277

End: 2936540

Strand: Reverse

Name: 209696118

Synonym: VSAL_I2711

Alternate gene names: NA

Gene position: 2936540-2936277 (Counterclockwise)

Preceding gene: 209696119

Following gene: 209696116

Centisome position: 88.31

GC content: 35.98

Gene sequence:

>264_bases
ATGGCTTGCCAATTTTGTCACTCTGATATATTCAAACAAAAACTAGGCCGATGCTTTCGCTGTATGAAACAACTTACTTT
TTTATCTATCGGCGGATGGTTAACATGGCTGGAGTTTTTTCAAGCAACACCTTATCAAATCGAAGCCATTGCCACTTTCA
TGGTAAGTGCTGCATTTAGCGGATTACTGACATTGCATTTATTAGCGATGGGCTATTATCGTTTGATAAAATCATCAAAT
ATTAAAGGTAAGCACAAAAAATAA

Upstream 100 bases:

>100_bases
TAAAAAAGGTCGATGTGAAAACATCGACCTTTTTTATTTCTATCTTACCCATCACTCGTTAAAATAACGGCCATAACTCG
TCATTTAAAATGGAATCAAC

Downstream 100 bases:

>100_bases
AGCCCCAATACCAATAAAGATATTAGGGCCTCTTAGAATCTATCTAAGAAAAAGCAGTATTAATAAGACTAGTCTTTAAT
TAAAAAGTTCACCACTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MACQFCHSDIFKQKLGRCFRCMKQLTFLSIGGWLTWLEFFQATPYQIEAIATFMVSAAFSGLLTLHLLAMGYYRLIKSSN
IKGKHKK

Sequences:

>Translated_87_residues
MACQFCHSDIFKQKLGRCFRCMKQLTFLSIGGWLTWLEFFQATPYQIEAIATFMVSAAFSGLLTLHLLAMGYYRLIKSSN
IKGKHKK
>Mature_86_residues
ACQFCHSDIFKQKLGRCFRCMKQLTFLSIGGWLTWLEFFQATPYQIEAIATFMVSAAFSGLLTLHLLAMGYYRLIKSSNI
KGKHKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10016; Mature: 9885

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACQFCHSDIFKQKLGRCFRCMKQLTFLSIGGWLTWLEFFQATPYQIEAIATFMVSAAFS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
GLLTLHLLAMGYYRLIKSSNIKGKHKK
HHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ACQFCHSDIFKQKLGRCFRCMKQLTFLSIGGWLTWLEFFQATPYQIEAIATFMVSAAFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
GLLTLHLLAMGYYRLIKSSNIKGKHKK
HHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA