| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is plsY [H]
Identifier: 209696101
GI number: 209696101
Start: 2914566
End: 2915147
Strand: Direct
Name: plsY [H]
Synonym: VSAL_I2693
Alternate gene names: 209696101
Gene position: 2914566-2915147 (Clockwise)
Preceding gene: 209696097
Following gene: 209696103
Centisome position: 87.65
GC content: 43.47
Gene sequence:
>582_bases ATGACTCCTCTTGCGCTAATTATGATCATCATCGCCTATCTACTGGGATCGATCTCTAGTGCTGTGCTTATTTGTCGATT AAGAGGCTTACCCGATCCTAGAACATCAGGATCTCAAAACCCTGGTGCAACCAATGTATTCCGACTGGGTGGAAAAGGGG CGGCAGGTCTGGTTCTACTGTGTGATATTTTAAAAGGAATGTTACCGGTATGGGGAGGTTACTTTCTTGAGAGCAATCCA CTACTACTTGGCATTATTGCTATTGCGGCGTGCTTAGGGCATATGTATCCGCTTTTTTTCCATTTTAAAGGAGGGAAAGG CGTCGCTACCGCATTAGGTGCACTGGCTCCTATCGGTTTAGATCTAACTGGTCTTCTATTTGGAACTTGGGTCGTAATCG TACTAATTACTGGATATTCTTCGTTAGCCTCAATGGCCACCGCATTACTCGCCCCTTTATTCACGTGGCTTGTGAAACCT CAATATACGTTACCCGTTGCGATGCTTTCATGCTTAATCGTCTTAAAACATCACGAAAATATTCGACGTTTTTTTGCCGG AAAAGAAAAGAAAATTTGGTAA
Upstream 100 bases:
>100_bases AAAACAACGTAATATTGTTATTACCTTGCTCAATGTGTAGAGCAATATACTATAAAAGTTATTTCTGATCGCTGTTGAAC ACTTAAATAAAGGCTCATTC
Downstream 100 bases:
>100_bases AGAAAAAGGGACTAATAAGTCCCCCTTCTTTATTTCGTAAAAAAGATCCATTACGATCTCTGTCGATCTTTTCTTATTTA ATCGGTGCTAATTGATCTAT
Product: glycerol-3-phosphate acyltransferase PlsY
Products: NA
Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase [H]
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MTPLALIMIIIAYLLGSISSAVLICRLRGLPDPRTSGSQNPGATNVFRLGGKGAAGLVLLCDILKGMLPVWGGYFLESNP LLLGIIAIAACLGHMYPLFFHFKGGKGVATALGALAPIGLDLTGLLFGTWVVIVLITGYSSLASMATALLAPLFTWLVKP QYTLPVAMLSCLIVLKHHENIRRFFAGKEKKIW
Sequences:
>Translated_193_residues MTPLALIMIIIAYLLGSISSAVLICRLRGLPDPRTSGSQNPGATNVFRLGGKGAAGLVLLCDILKGMLPVWGGYFLESNP LLLGIIAIAACLGHMYPLFFHFKGGKGVATALGALAPIGLDLTGLLFGTWVVIVLITGYSSLASMATALLAPLFTWLVKP QYTLPVAMLSCLIVLKHHENIRRFFAGKEKKIW >Mature_192_residues TPLALIMIIIAYLLGSISSAVLICRLRGLPDPRTSGSQNPGATNVFRLGGKGAAGLVLLCDILKGMLPVWGGYFLESNPL LLGIIAIAACLGHMYPLFFHFKGGKGVATALGALAPIGLDLTGLLFGTWVVIVLITGYSSLASMATALLAPLFTWLVKPQ YTLPVAMLSCLIVLKHHENIRRFFAGKEKKIW
Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP [H]
COG id: COG0344
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsY family [H]
Homologues:
Organism=Escherichia coli, GI1789439, Length=193, Percent_Identity=66.3212435233161, Blast_Score=266, Evalue=9e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003811 [H]
Pfam domain/function: PF02660 DUF205 [H]
EC number: NA
Molecular weight: Translated: 20605; Mature: 20474
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLALIMIIIAYLLGSISSAVLICRLRGLPDPRTSGSQNPGATNVFRLGGKGAAGLVLL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHH CDILKGMLPVWGGYFLESNPLLLGIIAIAACLGHMYPLFFHFKGGKGVATALGALAPIGL HHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCC DLTGLLFGTWVVIVLITGYSSLASMATALLAPLFTWLVKPQYTLPVAMLSCLIVLKHHEN HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH IRRFFAGKEKKIW HHHHHCCCCCCCC >Mature Secondary Structure TPLALIMIIIAYLLGSISSAVLICRLRGLPDPRTSGSQNPGATNVFRLGGKGAAGLVLL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHH CDILKGMLPVWGGYFLESNPLLLGIIAIAACLGHMYPLFFHFKGGKGVATALGALAPIGL HHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCC DLTGLLFGTWVVIVLITGYSSLASMATALLAPLFTWLVKPQYTLPVAMLSCLIVLKHHEN HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH IRRFFAGKEKKIW HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA