| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is exeA [H]
Identifier: 209696096
GI number: 209696096
Start: 2909780
End: 2911339
Strand: Reverse
Name: exeA [H]
Synonym: VSAL_I2688
Alternate gene names: 209696096
Gene position: 2911339-2909780 (Counterclockwise)
Preceding gene: 209696098
Following gene: 209696095
Centisome position: 87.55
GC content: 38.59
Gene sequence:
>1560_bases ATGTACCAAGACTTCTTTGGCTTTACTGAATGTCCATTTTCAATGACTCCTAATGCGCGTTTTCTTTATTTAAGCGAGCG TCACAAGGAGGCATTAAGCTATTTGCAATCAGGATTAGGGCAAGGGGGCGGATTTGCTTTATTAACGGGAGAAGTTGGTA CTGGTAAAACGACAGTATCGAGAGCACTTTTTTCGGAGTTAAATGAAAATATACATCTTGCTCTTATTTTAAATCCGACA TTTACCGCATTGGAATTATTCACGGCTATTTGTGATGAGTTAAAAATTGAATATTCATCAACACCGTCATTAAAGCAATT AACGGAAGTGATTGTTGAGTTCTTAGTGAGTGAAGATAAAAAGGGATTTCAAACCATTGTCGCGATAGATGAAGCTCAAC ATTTAGGTCCTGATGTATTAGAACAGCTTCGTTTATTAACTAATTTTGAAACGGACAGTGATAAATTATTAAAGGTTCTG TTGATTGGTCAGCCTGAACTGCAACAGAAACTGCAACAAGCTAATTTACGCCAGTTGGCTCAGAGGATCACCGCTCGATA TCATTTATTGCCGTTAACAGTAGAAGACATCCAATATTATATCGATCACCGTTTGCAGGTTGTTGGTAGTAATGCGACGT TATTTTCGTCTTCGGCGATTAAAATCATCGCATTGCGATCAAAAGGCATTCCCCGTTTGATTAATCTATTATGCGATAAG GCACTATGGGTGAGTTACCAACAGGGAGAAAAAAACGTTAATGCTTCATCGGTAAAGCGTGCTTGTGAATTGGTTTTAGA GTGGGAAATCCCAGCAGTAAGTCACATTGACCTACCCGCTAAAAACAACGCGCCTTGGTTAATGTTATCTATTGCAATTG CACTATCGGTTAGTGGTACTTGGGGGGTTTATAAAGCACTCCCTAGCTACTTAGCATCGACGTATCCTATCGTCGAACAA GTGAAAGAACATCCATTAATCGGCTTTGATTCCGAGCAAGCGGCTTTTCAACAATTACTCGAAGTATGGGGTTATGAAAC AAATACATTTCAAGCCAACTGTACTAATGCAAAAAGAGCGCAGTTATATTGTTTAGATAATAATGGGTCTTTAAATGATC TATTAGCACTAAATCGCCCCGCGATTGTATGGTTACAACAAGAGAATGGAGATGACTTACTGGCTATTGTTTATCATATC TCATCTAAAAATATTGCATTATTATTGCCAGAGCGCCAGATTGAAGTTTCTCATCAATGGTTTGAAAAACATTGGAATGG CGCTTATATGCAACTCTGGAAAAAACCAATTATGACCAAAAGAGCGATGAGACTTGGTGATGAAGGTGAAGCCATTGTGG AATTGAATCAATTACTTTCTTTTGCCTTAGAGCAACCACTGACTGATTCGAATCGTTTTACTGAAGAAACCGAAGAACAA GTTAAGCAATTTCAAGCTATTTTCGGTTTGAAGACAGATGGAGTGGTGGGGTCAAGTACGTTAATGTGGTTAGACAGTGT GATAAATACCAATGTCCCTATGCTTCAAGGAGACAAATAA
Upstream 100 bases:
>100_bases TACTTTCTGACTTCCAATGATACCGTGCAATGATAATATTTCGACTTTTTATTCGAAGACTCACTCATCGATATAGATAA ATTAGGTAGATCCCCCTTTT
Downstream 100 bases:
>100_bases ATGAGTACTTTCTTTTCTCATCCTTCAAAGTTTTTGATAGGTTCATTGGTGATATTACCTCCCTTTGCTTTATCCTTGGT TATCGCGTTGCCTTATTATG
Product: general secretion pathway protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 519; Mature: 519
Protein sequence:
>519_residues MYQDFFGFTECPFSMTPNARFLYLSERHKEALSYLQSGLGQGGGFALLTGEVGTGKTTVSRALFSELNENIHLALILNPT FTALELFTAICDELKIEYSSTPSLKQLTEVIVEFLVSEDKKGFQTIVAIDEAQHLGPDVLEQLRLLTNFETDSDKLLKVL LIGQPELQQKLQQANLRQLAQRITARYHLLPLTVEDIQYYIDHRLQVVGSNATLFSSSAIKIIALRSKGIPRLINLLCDK ALWVSYQQGEKNVNASSVKRACELVLEWEIPAVSHIDLPAKNNAPWLMLSIAIALSVSGTWGVYKALPSYLASTYPIVEQ VKEHPLIGFDSEQAAFQQLLEVWGYETNTFQANCTNAKRAQLYCLDNNGSLNDLLALNRPAIVWLQQENGDDLLAIVYHI SSKNIALLLPERQIEVSHQWFEKHWNGAYMQLWKKPIMTKRAMRLGDEGEAIVELNQLLSFALEQPLTDSNRFTEETEEQ VKQFQAIFGLKTDGVVGSSTLMWLDSVINTNVPMLQGDK
Sequences:
>Translated_519_residues MYQDFFGFTECPFSMTPNARFLYLSERHKEALSYLQSGLGQGGGFALLTGEVGTGKTTVSRALFSELNENIHLALILNPT FTALELFTAICDELKIEYSSTPSLKQLTEVIVEFLVSEDKKGFQTIVAIDEAQHLGPDVLEQLRLLTNFETDSDKLLKVL LIGQPELQQKLQQANLRQLAQRITARYHLLPLTVEDIQYYIDHRLQVVGSNATLFSSSAIKIIALRSKGIPRLINLLCDK ALWVSYQQGEKNVNASSVKRACELVLEWEIPAVSHIDLPAKNNAPWLMLSIAIALSVSGTWGVYKALPSYLASTYPIVEQ VKEHPLIGFDSEQAAFQQLLEVWGYETNTFQANCTNAKRAQLYCLDNNGSLNDLLALNRPAIVWLQQENGDDLLAIVYHI SSKNIALLLPERQIEVSHQWFEKHWNGAYMQLWKKPIMTKRAMRLGDEGEAIVELNQLLSFALEQPLTDSNRFTEETEEQ VKQFQAIFGLKTDGVVGSSTLMWLDSVINTNVPMLQGDK >Mature_519_residues MYQDFFGFTECPFSMTPNARFLYLSERHKEALSYLQSGLGQGGGFALLTGEVGTGKTTVSRALFSELNENIHLALILNPT FTALELFTAICDELKIEYSSTPSLKQLTEVIVEFLVSEDKKGFQTIVAIDEAQHLGPDVLEQLRLLTNFETDSDKLLKVL LIGQPELQQKLQQANLRQLAQRITARYHLLPLTVEDIQYYIDHRLQVVGSNATLFSSSAIKIIALRSKGIPRLINLLCDK ALWVSYQQGEKNVNASSVKRACELVLEWEIPAVSHIDLPAKNNAPWLMLSIAIALSVSGTWGVYKALPSYLASTYPIVEQ VKEHPLIGFDSEQAAFQQLLEVWGYETNTFQANCTNAKRAQLYCLDNNGSLNDLLALNRPAIVWLQQENGDDLLAIVYHI SSKNIALLLPERQIEVSHQWFEKHWNGAYMQLWKKPIMTKRAMRLGDEGEAIVELNQLLSFALEQPLTDSNRFTEETEEQ VKQFQAIFGLKTDGVVGSSTLMWLDSVINTNVPMLQGDK
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
Organism=Escherichia coli, GI1789720, Length=489, Percent_Identity=26.7893660531697, Blast_Score=97, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 58385; Mature: 58385
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQDFFGFTECPFSMTPNARFLYLSERHKEALSYLQSGLGQGGGFALLTGEVGTGKTTVS CCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHH RALFSELNENIHLALILNPTFTALELFTAICDELKIEYSSTPSLKQLTEVIVEFLVSEDK HHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCC KGFQTIVAIDEAQHLGPDVLEQLRLLTNFETDSDKLLKVLLIGQPELQQKLQQANLRQLA CCCEEEEEECCHHHCCHHHHHHHHHHHCCCCCHHHHEEEEECCCHHHHHHHHHHHHHHHH QRITARYHLLPLTVEDIQYYIDHRLQVVGSNATLFSSSAIKIIALRSKGIPRLINLLCDK HHHHHHHEEEEEEHHHHHHHHHCEEEEEECCCEEECCCCEEEEEECCCCHHHHHHHHHHH ALWVSYQQGEKNVNASSVKRACELVLEWEIPAVSHIDLPAKNNAPWLMLSIAIALSVSGT HHEEEECCCCCCCCHHHHHHHHHHEEEECCCCEEEECCCCCCCCCEEEEEEEEHHCCCCC WGVYKALPSYLASTYPIVEQVKEHPLIGFDSEQAAFQQLLEVWGYETNTFQANCTNAKRA HHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCEE QLYCLDNNGSLNDLLALNRPAIVWLQQENGDDLLAIVYHISSKNIALLLPERQIEVSHQW EEEEECCCCCHHHHHCCCCCEEEEEEECCCCCEEEEEEEECCCCEEEEECCCHHHHHHHH FEKHWNGAYMQLWKKPIMTKRAMRLGDEGEAIVELNQLLSFALEQPLTDSNRFTEETEEQ HHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH VKQFQAIFGLKTDGVVGSSTLMWLDSVINTNVPMLQGDK HHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEECCC >Mature Secondary Structure MYQDFFGFTECPFSMTPNARFLYLSERHKEALSYLQSGLGQGGGFALLTGEVGTGKTTVS CCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHH RALFSELNENIHLALILNPTFTALELFTAICDELKIEYSSTPSLKQLTEVIVEFLVSEDK HHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCC KGFQTIVAIDEAQHLGPDVLEQLRLLTNFETDSDKLLKVLLIGQPELQQKLQQANLRQLA CCCEEEEEECCHHHCCHHHHHHHHHHHCCCCCHHHHEEEEECCCHHHHHHHHHHHHHHHH QRITARYHLLPLTVEDIQYYIDHRLQVVGSNATLFSSSAIKIIALRSKGIPRLINLLCDK HHHHHHHEEEEEEHHHHHHHHHCEEEEEECCCEEECCCCEEEEEECCCCHHHHHHHHHHH ALWVSYQQGEKNVNASSVKRACELVLEWEIPAVSHIDLPAKNNAPWLMLSIAIALSVSGT HHEEEECCCCCCCCHHHHHHHHHHEEEECCCCEEEECCCCCCCCCEEEEEEEEHHCCCCC WGVYKALPSYLASTYPIVEQVKEHPLIGFDSEQAAFQQLLEVWGYETNTFQANCTNAKRA HHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCEE QLYCLDNNGSLNDLLALNRPAIVWLQQENGDDLLAIVYHISSKNIALLLPERQIEVSHQW EEEEECCCCCHHHHHCCCCCEEEEEEECCCCCEEEEEEEECCCCEEEEECCCHHHHHHHH FEKHWNGAYMQLWKKPIMTKRAMRLGDEGEAIVELNQLLSFALEQPLTDSNRFTEETEEQ HHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH VKQFQAIFGLKTDGVVGSSTLMWLDSVINTNVPMLQGDK HHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]