| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is uppP
Identifier: 209696098
GI number: 209696098
Start: 2912770
End: 2913573
Strand: Reverse
Name: uppP
Synonym: VSAL_I2690
Alternate gene names: 209696098
Gene position: 2913573-2912770 (Counterclockwise)
Preceding gene: 209696099
Following gene: 209696096
Centisome position: 87.62
GC content: 37.56
Gene sequence:
>804_bases ATGACGTATTTTGAAGCATTTTTTCTTGCTTTATTGCAAGGATTTACTGAATTTTTACCAATATCTAGTTCGGCTCATTT AATTTTACCGTCGGAGGTACTTGGTTGGTCTGATCAAGGTTTAGCTTTTGATGTTGCTGTTCATGTTGGTACGTTAGCCG CGGTTGTTATGTATTTCAGAAAAGAAGTAGTGACATTACTTTCTGCTTGGACTTTCTCTATTGTAAAAAAAGAACACAAT AAAGAATCTAAACTAGCGTGGTTAATTATATTATCAACGATTCCTGCCGCAGTATGTGGGCTGATGTTTAAAGACTTCAT TGAAGTTTATTTACGTAGTGCTTGGGTGATTGCGATAACGACTATCGTGTTTGGTCTATTACTGTGGTGGGTAGACAAAA ACTCAACGCTTGTTAAAGATGAATATGAAATGACGTGGAAAAAAGCCTTGTTCCTTGGTATTGCTCAGGCAGCAGCTATG ATCCCAGGAACATCACGCTCAGGTATCACAATCACAGCGGCGTTGTATCTTGGCTTTACCCGTGAGGCGGCAGCGCGTTT TTCTTTCTTAATGTCGATACCAATTATTACCTTAGCTGGTTCTTATCTTGGTTTAAAATTAGCATTAAGTGATGCGATTA TTCACTTTGGTTTCTTAGGTACCGGTATTATTGTTTCATTTATTAGTGCTTATATTTGTATTCACTTTTTCTTGAAACTG ATTTCGAGTATGGGAATGACGCCATTTGTTATATATCGATTATTGTTAGGGACGAGCCTACTTGCTTGGTTAGCGTTAAC GTAA
Upstream 100 bases:
>100_bases TTCCAAGTACAGATAAAACCATTAGTGAAATATGGGCGGGTTTCCCTAGAACTCAATCATTAACACCTGTCACTTTGACA TTGATTATTTAAGAGATGTA
Downstream 100 bases:
>100_bases TAATTAGAGTCTAGATTAAGGTGGTTGTTGTAAGTGATGAACTTATTAACAACCACTTTTTAATTCTAGTTTATTAAAAG TGCCACTTTGACAGCTTCAA
Product: undecaprenyl pyrophosphate phosphatase
Products: NA
Alternate protein names: Bacitracin resistance protein; Undecaprenyl pyrophosphate phosphatase
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTYFEAFFLALLQGFTEFLPISSSAHLILPSEVLGWSDQGLAFDVAVHVGTLAAVVMYFRKEVVTLLSAWTFSIVKKEHN KESKLAWLIILSTIPAAVCGLMFKDFIEVYLRSAWVIAITTIVFGLLLWWVDKNSTLVKDEYEMTWKKALFLGIAQAAAM IPGTSRSGITITAALYLGFTREAAARFSFLMSIPIITLAGSYLGLKLALSDAIIHFGFLGTGIIVSFISAYICIHFFLKL ISSMGMTPFVIYRLLLGTSLLAWLALT
Sequences:
>Translated_267_residues MTYFEAFFLALLQGFTEFLPISSSAHLILPSEVLGWSDQGLAFDVAVHVGTLAAVVMYFRKEVVTLLSAWTFSIVKKEHN KESKLAWLIILSTIPAAVCGLMFKDFIEVYLRSAWVIAITTIVFGLLLWWVDKNSTLVKDEYEMTWKKALFLGIAQAAAM IPGTSRSGITITAALYLGFTREAAARFSFLMSIPIITLAGSYLGLKLALSDAIIHFGFLGTGIIVSFISAYICIHFFLKL ISSMGMTPFVIYRLLLGTSLLAWLALT >Mature_266_residues TYFEAFFLALLQGFTEFLPISSSAHLILPSEVLGWSDQGLAFDVAVHVGTLAAVVMYFRKEVVTLLSAWTFSIVKKEHNK ESKLAWLIILSTIPAAVCGLMFKDFIEVYLRSAWVIAITTIVFGLLLWWVDKNSTLVKDEYEMTWKKALFLGIAQAAAMI PGTSRSGITITAALYLGFTREAAARFSFLMSIPIITLAGSYLGLKLALSDAIIHFGFLGTGIIVSFISAYICIHFFLKLI SSMGMTPFVIYRLLLGTSLLAWLALT
Specific function: Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
COG id: COG1968
COG function: function code V; Uncharacterized bacitracin resistance protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uppP family
Homologues:
Organism=Escherichia coli, GI1789437, Length=265, Percent_Identity=31.6981132075472, Blast_Score=120, Evalue=7e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UPPP_ALISL (B6EM11)
Other databases:
- EMBL: FM178379 - RefSeq: YP_002264028.1 - GeneID: 6988304 - GenomeReviews: FM178379_GR - KEGG: vsa:VSAL_I2690 - HOGENOM: HBG391969 - OMA: VHVGTLI - ProtClustDB: PRK00281 - GO: GO:0016311 - HAMAP: MF_01006 - InterPro: IPR003824 - TIGRFAMs: TIGR00753
Pfam domain/function: PF02673 BacA
EC number: =3.6.1.27
Molecular weight: Translated: 29520; Mature: 29388
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x224e1c0c)-; HASH(0x22a0d19c)-; HASH(0x22a0cfa4)-; HASH(0x22a21370)-; HASH(0x22a0d2ec)-; HASH(0x22a07cb0)-; HASH(0x22a0d250)-; HASH(0x1d9fd2cc)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYFEAFFLALLQGFTEFLPISSSAHLILPSEVLGWSDQGLAFDVAVHVGTLAAVVMYFR CCHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHCCCCCCCCEEHHHHHHHHHHHHHHHHH KEVVTLLSAWTFSIVKKEHNKESKLAWLIILSTIPAAVCGLMFKDFIEVYLRSAWVIAIT HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIVFGLLLWWVDKNSTLVKDEYEMTWKKALFLGIAQAAAMIPGTSRSGITITAALYLGFT HHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHH REAAARFSFLMSIPIITLAGSYLGLKLALSDAIIHFGFLGTGIIVSFISAYICIHFFLKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISSMGMTPFVIYRLLLGTSLLAWLALT HHHCCCHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure TYFEAFFLALLQGFTEFLPISSSAHLILPSEVLGWSDQGLAFDVAVHVGTLAAVVMYFR CHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHCCCCCCCCEEHHHHHHHHHHHHHHHHH KEVVTLLSAWTFSIVKKEHNKESKLAWLIILSTIPAAVCGLMFKDFIEVYLRSAWVIAIT HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIVFGLLLWWVDKNSTLVKDEYEMTWKKALFLGIAQAAAMIPGTSRSGITITAALYLGFT HHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHH REAAARFSFLMSIPIITLAGSYLGLKLALSDAIIHFGFLGTGIIVSFISAYICIHFFLKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISSMGMTPFVIYRLLLGTSLLAWLALT HHHCCCHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA