| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is yqiA [H]
Identifier: 209696079
GI number: 209696079
Start: 2890947
End: 2891531
Strand: Reverse
Name: yqiA [H]
Synonym: VSAL_I2671
Alternate gene names: 209696079
Gene position: 2891531-2890947 (Counterclockwise)
Preceding gene: 209696080
Following gene: 209696078
Centisome position: 86.96
GC content: 36.92
Gene sequence:
>585_bases ATGAAAAAGCCAAGTTTATTATTGTACATTCATGGTTTTAACAGTTCCCCATTGTCACATAAAGCTCAGGTCATGAGTCG TTATTGTAAAAATGAGCGTCCTGATATTCGCGTTATAACCCCACGCTTGCCTTCTTACCCTAAAGAAGCCGCTGAATTTT TAGTGAATCTAATTGAAGAATATAGATCTGACTATACGATTGGCTTAGTGGGAAGTTCACTTGGTGGGTATTTATCAACA TGGTTAAATGATCAATATGGTTATAAAGCCGTCCTAGTTAATCCGGCGATTAAACCTGATGAGTTGTTAGCGGATTATTT AGGTAAGCAAGTTAACCCTTACACAAATGAAACGTATTTTCTTGAAGCGCAGCATATGGCTGAGTTACAAGCATTAGCAA TAGCGACCATTACTTCACCAGAAGATCTGTGGTTATTGCAGCAAGAAGGTGATGAAGTTTTAGATTATCATCAAGCTGTT GAGAAATACGCACAAAGCAAACAAATAGTAGAAAAAGGGGGCGATCACAGTTTTGTTGATTTCGAACGCTATCCTGAACA AATAATTCAATTTCTAAATTTATAG
Upstream 100 bases:
>100_bases AGAATATTGGATTTATTACCCAATGGAGAGATCGTGACTCAAGTGTACCGCTTAGAACAGTGTGAGTTTTCAGCAGATGC AGATGCAGGAGGATATTAAG
Downstream 100 bases:
>100_bases TTACTGTTTATCTACAGTGAACACACACTAACTATACAATCTTTAATACAAAGCCACATATTTAGAGAGGAATAGGGGCG ATTGCTTGACTTTCCTTTCT
Product: esterase YqiA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKKPSLLLYIHGFNSSPLSHKAQVMSRYCKNERPDIRVITPRLPSYPKEAAEFLVNLIEEYRSDYTIGLVGSSLGGYLST WLNDQYGYKAVLVNPAIKPDELLADYLGKQVNPYTNETYFLEAQHMAELQALAIATITSPEDLWLLQQEGDEVLDYHQAV EKYAQSKQIVEKGGDHSFVDFERYPEQIIQFLNL
Sequences:
>Translated_194_residues MKKPSLLLYIHGFNSSPLSHKAQVMSRYCKNERPDIRVITPRLPSYPKEAAEFLVNLIEEYRSDYTIGLVGSSLGGYLST WLNDQYGYKAVLVNPAIKPDELLADYLGKQVNPYTNETYFLEAQHMAELQALAIATITSPEDLWLLQQEGDEVLDYHQAV EKYAQSKQIVEKGGDHSFVDFERYPEQIIQFLNL >Mature_194_residues MKKPSLLLYIHGFNSSPLSHKAQVMSRYCKNERPDIRVITPRLPSYPKEAAEFLVNLIEEYRSDYTIGLVGSSLGGYLST WLNDQYGYKAVLVNPAIKPDELLADYLGKQVNPYTNETYFLEAQHMAELQALAIATITSPEDLWLLQQEGDEVLDYHQAV EKYAQSKQIVEKGGDHSFVDFERYPEQIIQFLNL
Specific function: Displays esterase activity toward palmitoyl-CoA and pNP- butyrate [H]
COG id: COG3150
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789409, Length=190, Percent_Identity=50, Blast_Score=199, Evalue=8e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008886 [H]
Pfam domain/function: PF05728 UPF0227 [H]
EC number: NA
Molecular weight: Translated: 22208; Mature: 22208
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKPSLLLYIHGFNSSPLSHKAQVMSRYCKNERPDIRVITPRLPSYPKEAAEFLVNLIEE CCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH YRSDYTIGLVGSSLGGYLSTWLNDQYGYKAVLVNPAIKPDELLADYLGKQVNPYTNETYF HHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEE LEAQHMAELQALAIATITSPEDLWLLQQEGDEVLDYHQAVEKYAQSKQIVEKGGDHSFVD EEHHHHHHHHHHHHHEECCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH FERYPEQIIQFLNL HHHHHHHHHHHHCC >Mature Secondary Structure MKKPSLLLYIHGFNSSPLSHKAQVMSRYCKNERPDIRVITPRLPSYPKEAAEFLVNLIEE CCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH YRSDYTIGLVGSSLGGYLSTWLNDQYGYKAVLVNPAIKPDELLADYLGKQVNPYTNETYF HHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEE LEAQHMAELQALAIATITSPEDLWLLQQEGDEVLDYHQAVEKYAQSKQIVEKGGDHSFVD EEHHHHHHHHHHHHHEECCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH FERYPEQIIQFLNL HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]