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The map label for this gene is murF [H]

Identifier: 209696056

GI number: 209696056

Start: 2865928

End: 2867286

Strand: Reverse

Name: murF [H]

Synonym: VSAL_I2648

Alternate gene names: 209696056

Gene position: 2867286-2865928 (Counterclockwise)

Preceding gene: 209696057

Following gene: 209696055

Centisome position: 86.23

GC content: 40.62

Gene sequence:

>1359_bases
ATGATCTTAATGTCATTGAATGAAGTGGCGAACATTTGTCAGGGACGTTTGAATGGGGTAAATACCTCGATTTCAAGCGT
GTCGACTGACAGTCGAAATATTGAGGCTCAAGGGCTGTTTGTTGCGCTGATTGGTGAGCGATTTGATGCCCATTCTTTTG
TCTCAGTGGCTGAAGAACAAGGTGCGGTTGCTTTACTTGTTTCACATGAGGTTGATTCTTCATTACCTCAAGTGATCGTT
AGTGATACGGAAAAAGCGTTTGGGTTACTCGGTCAATATGTTCATCAGCAATGCCATTCCTTTACCATTGCTTTAACTGG
CAGTTGTGGCAAAACCACCGTAAAAGAAATGTTAGCGTCTATTTTAAAACGTTCTGGTGAAGTGTTAGCCACTGCGGGTA
ATTTTAATAATGAAATCGGCGTGCCATTAACGTTGTTACGATCTCAACCAAGTAATGATTTCTCTGTCATTGAACTCGGC
GCTAATCATCAAAATGAAATCGCTTATACCACACAACTTGTTCGTCCTGATGTCGCCTTAGTAAATAATATTGCGGCGGC
ACATTTAGAAGGATTTGGTTCGATAGAGGGGGTTGCGAAGGCAAAAGGTGAAATCTTTGAAGGTCTAAAAGAAAATGCGA
CGGCTATTTATAATTTAGACAGTAATGGATTGCCTCGCTGGTCTGATTTATTTGAAAACAAAACGGTATTGAGTTTTTCA
CAAGAAAATAATCAAGCTGACTTTCATGCAAGTAATATAGAGATCAATGGTCTTGGTGCATCTTCATTTACATTGAATAC
GCCGGTAGGAAGCATTGTGGTTTCACTCACGATTATTGGTAAGCATAATGTATCAAATGCAGTTGCGGCTGCGGCGTTAG
CTGTTCAAGCTAACTGTACATTAGCTGATATTCAACAAGGCTTACAATCGCTTGAAAATGTAAAAGGAAGGGTTGCTGTT
GAGGTTTTACCTTCTGGTTTGAAAGTGATCGATGATACTTACAATGCCAGCGTTCCTGCGATGAAAGCCGCAGTGGACTT
ACTCGGTGGCTTTAATGGCAGTCGTTGGCTGGTTTTAGGCAATATGGCTGAGCTTGGTAAAGAAAGCCTTGCACTTCACC
GTGAAGTTGGTGAATATGCTGCCCCATATCAATTTGAGCAAGTAATAACGTTTGGTGATGATACCAAGGTGATCAGCGAA
TTATGCAATGGTCGACACTTTGAGTCTCGTAACGAATTAAATGCCTATTTATTGCAAGAATTACAATTAATTAAACATAA
TGAGGTTACCGTGCTAGTAAAAGGTGCCAATAGTTCACGTATGAGCGAAGTAGTTTTAGCTCTTAAGGAGTGTCAGTAA

Upstream 100 bases:

>100_bases
TATTGGCAGGCAAGGGGCATGAAGAATATCAAGTGCTTGCTACAGAAACGATTCATTATTCTGATCGTGAAACTGCGCAG
AAATTATTAGGACTATCATC

Downstream 100 bases:

>100_bases
TGATTATCTGGTTATCTAACTTTCTAGAGCAATATTTCCCATTTTTTCGTTTATTCGAATACCTTAGCTTTCGAGCTATT
TTAAGTATTATTACCGCATT

Product: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-ala nine ligase

Products: NA

Alternate protein names: D-alanyl-D-alanine-adding enzyme; UDP-MurNAc-pentapeptide synthetase [H]

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MILMSLNEVANICQGRLNGVNTSISSVSTDSRNIEAQGLFVALIGERFDAHSFVSVAEEQGAVALLVSHEVDSSLPQVIV
SDTEKAFGLLGQYVHQQCHSFTIALTGSCGKTTVKEMLASILKRSGEVLATAGNFNNEIGVPLTLLRSQPSNDFSVIELG
ANHQNEIAYTTQLVRPDVALVNNIAAAHLEGFGSIEGVAKAKGEIFEGLKENATAIYNLDSNGLPRWSDLFENKTVLSFS
QENNQADFHASNIEINGLGASSFTLNTPVGSIVVSLTIIGKHNVSNAVAAAALAVQANCTLADIQQGLQSLENVKGRVAV
EVLPSGLKVIDDTYNASVPAMKAAVDLLGGFNGSRWLVLGNMAELGKESLALHREVGEYAAPYQFEQVITFGDDTKVISE
LCNGRHFESRNELNAYLLQELQLIKHNEVTVLVKGANSSRMSEVVLALKECQ

Sequences:

>Translated_452_residues
MILMSLNEVANICQGRLNGVNTSISSVSTDSRNIEAQGLFVALIGERFDAHSFVSVAEEQGAVALLVSHEVDSSLPQVIV
SDTEKAFGLLGQYVHQQCHSFTIALTGSCGKTTVKEMLASILKRSGEVLATAGNFNNEIGVPLTLLRSQPSNDFSVIELG
ANHQNEIAYTTQLVRPDVALVNNIAAAHLEGFGSIEGVAKAKGEIFEGLKENATAIYNLDSNGLPRWSDLFENKTVLSFS
QENNQADFHASNIEINGLGASSFTLNTPVGSIVVSLTIIGKHNVSNAVAAAALAVQANCTLADIQQGLQSLENVKGRVAV
EVLPSGLKVIDDTYNASVPAMKAAVDLLGGFNGSRWLVLGNMAELGKESLALHREVGEYAAPYQFEQVITFGDDTKVISE
LCNGRHFESRNELNAYLLQELQLIKHNEVTVLVKGANSSRMSEVVLALKECQ
>Mature_452_residues
MILMSLNEVANICQGRLNGVNTSISSVSTDSRNIEAQGLFVALIGERFDAHSFVSVAEEQGAVALLVSHEVDSSLPQVIV
SDTEKAFGLLGQYVHQQCHSFTIALTGSCGKTTVKEMLASILKRSGEVLATAGNFNNEIGVPLTLLRSQPSNDFSVIELG
ANHQNEIAYTTQLVRPDVALVNNIAAAHLEGFGSIEGVAKAKGEIFEGLKENATAIYNLDSNGLPRWSDLFENKTVLSFS
QENNQADFHASNIEINGLGASSFTLNTPVGSIVVSLTIIGKHNVSNAVAAAALAVQANCTLADIQQGLQSLENVKGRVAV
EVLPSGLKVIDDTYNASVPAMKAAVDLLGGFNGSRWLVLGNMAELGKESLALHREVGEYAAPYQFEQVITFGDDTKVISE
LCNGRHFESRNELNAYLLQELQLIKHNEVTVLVKGANSSRMSEVVLALKECQ

Specific function: Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein [H]

COG id: COG0770

COG function: function code M; UDP-N-acetylmuramyl pentapeptide synthase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MurCDEF family [H]

Homologues:

Organism=Escherichia coli, GI1786274, Length=451, Percent_Identity=49.0022172949002, Blast_Score=373, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004101
- InterPro:   IPR013221
- InterPro:   IPR000713
- InterPro:   IPR005863 [H]

Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]

EC number: =6.3.2.10 [H]

Molecular weight: Translated: 48384; Mature: 48384

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILMSLNEVANICQGRLNGVNTSISSVSTDSRNIEAQGLFVALIGERFDAHSFVSVAEEQ
CEEEEHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEECCEEEEEECCCCCCHHHHHHHHCC
GAVALLVSHEVDSSLPQVIVSDTEKAFGLLGQYVHQQCHSFTIALTGSCGKTTVKEMLAS
CCEEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHH
ILKRSGEVLATAGNFNNEIGVPLTLLRSQPSNDFSVIELGANHQNEIAYTTQLVRPDVAL
HHHCCCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCEEEEHHHHCCCHHH
VNNIAAAHLEGFGSIEGVAKAKGEIFEGLKENATAIYNLDSNGLPRWSDLFENKTVLSFS
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHCCCEEEEEC
QENNQADFHASNIEINGLGASSFTLNTPVGSIVVSLTIIGKHNVSNAVAAAALAVQANCT
CCCCCCCEEECCEEEEECCCCCEEECCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCC
LADIQQGLQSLENVKGRVAVEVLPSGLKVIDDTYNASVPAMKAAVDLLGGFNGSRWLVLG
HHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEC
NMAELGKESLALHREVGEYAAPYQFEQVITFGDDTKVISELCNGRHFESRNELNAYLLQE
CHHHHCHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHH
LQLIKHNEVTVLVKGANSSRMSEVVLALKECQ
HHHHCCCCEEEEEECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MILMSLNEVANICQGRLNGVNTSISSVSTDSRNIEAQGLFVALIGERFDAHSFVSVAEEQ
CEEEEHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEECCEEEEEECCCCCCHHHHHHHHCC
GAVALLVSHEVDSSLPQVIVSDTEKAFGLLGQYVHQQCHSFTIALTGSCGKTTVKEMLAS
CCEEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHH
ILKRSGEVLATAGNFNNEIGVPLTLLRSQPSNDFSVIELGANHQNEIAYTTQLVRPDVAL
HHHCCCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCEEEEHHHHCCCHHH
VNNIAAAHLEGFGSIEGVAKAKGEIFEGLKENATAIYNLDSNGLPRWSDLFENKTVLSFS
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHCCCEEEEEC
QENNQADFHASNIEINGLGASSFTLNTPVGSIVVSLTIIGKHNVSNAVAAAALAVQANCT
CCCCCCCEEECCEEEEECCCCCEEECCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCC
LADIQQGLQSLENVKGRVAVEVLPSGLKVIDDTYNASVPAMKAAVDLLGGFNGSRWLVLG
HHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEC
NMAELGKESLALHREVGEYAAPYQFEQVITFGDDTKVISELCNGRHFESRNELNAYLLQE
CHHHHCHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHH
LQLIKHNEVTVLVKGANSSRMSEVVLALKECQ
HHHHCCCCEEEEEECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]