| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is fbpA [H]
Identifier: 209696004
GI number: 209696004
Start: 2791514
End: 2792527
Strand: Reverse
Name: fbpA [H]
Synonym: VSAL_I2588
Alternate gene names: 209696004
Gene position: 2792527-2791514 (Counterclockwise)
Preceding gene: 209696005
Following gene: 209696003
Centisome position: 83.98
GC content: 38.86
Gene sequence:
>1014_bases ATGAAAAAGTTATTATCAGTTTCTGCATTAATTGCAGGCGTATTCGCACCAAGTGTTATGGCTGCAGAAGAAGTGAATGT TTACTCTTACCGCCAACCTTTCTTAGTTGAGCCAATGTTTAAAGAATTCACTAAAGAGACTGGTATTAAAGTTAACGTGA AATTTGCTAAGAAAGGGCTGGCTGAAAAATTGGCTCAAGAAGGTGAGTTAAGTCCTGCTGACGTTATTTTAACTACCGAC ATTAGCCGTCTTGCTGAATTAACGAATAAAAAATTAGTTCAACCTGTTGATAGTAAAACTATTGATGCGAACGTCCCCGC TCAATACCGTGACGCAGACGATGAATGGTTTGCATTAACACTTCGTGCTCGTAACGTGTATTCATCTCGTGATCGTGTGG GTAAATTAGGTGCTGATTTTGATTATGCTGATTTAGCTAACCCTGAGTGGAAAGGAAAAATTTGTACTCGTAGTGGTAAG CACCCTTACAATGTATCTCTTGTTTCTTCGATGATAGCTCATCATGGTGAAGCAGAAGCTAAAACATGGTTAGAAGGCTT AAAAGCAAACCTTGCACGTAAACCTCAAGGTAATGACCGTGCTCAAGTTAAAGCGATTAAAGAAGGCCTTTGTGATGTTG CTTTAGGTAACAGTTATTACCTAGGTAAAATGGTGAATGATCCTAAGCAAGTATCATGGGCTGAGTCGGTATACATTAAT TTCCCTAACCAAAATACTGATGGTACACATGTAAACATCAGTGGTATGGCGATGGCTAAATATGCACCGAATAAAGACAA TGCATTAAAATTAATGGAGTTTTTAACTGGTGATGTTGCTCAAGGCATGTACGCTGAAGTGAACTACGAATACCCAGTTA AGCCAAGTGTTAAACCTTCAGAGTTAGTGGCATCGTGGGGCGAATTTAAAGCGGATACTCTACCTTTAGATGACATCGCA GATAACCACACGAAAGCAATTAAACTTTTAGATGAAGTGAAGTTTGATCTTTAA
Upstream 100 bases:
>100_bases TCTGGTCATTGTCATTTTTAAATTCATTTGTATAATATCGATATCGATATTGATAAGTATTCTTATTACCATTTGTAACT AGAGATTTTAAAGGAATATC
Downstream 100 bases:
>100_bases TTTGATATTTACTATTGGTGAGGTAACAATACCTCATCATTTTTAAAAGAGCCTTGTTGTTTAGGCAATGAAAGAAAAAT TATTATTCTGGAAAACCAGT
Product: iron(III) ABC transporter periplasmic iron-compound-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MKKLLSVSALIAGVFAPSVMAAEEVNVYSYRQPFLVEPMFKEFTKETGIKVNVKFAKKGLAEKLAQEGELSPADVILTTD ISRLAELTNKKLVQPVDSKTIDANVPAQYRDADDEWFALTLRARNVYSSRDRVGKLGADFDYADLANPEWKGKICTRSGK HPYNVSLVSSMIAHHGEAEAKTWLEGLKANLARKPQGNDRAQVKAIKEGLCDVALGNSYYLGKMVNDPKQVSWAESVYIN FPNQNTDGTHVNISGMAMAKYAPNKDNALKLMEFLTGDVAQGMYAEVNYEYPVKPSVKPSELVASWGEFKADTLPLDDIA DNHTKAIKLLDEVKFDL
Sequences:
>Translated_337_residues MKKLLSVSALIAGVFAPSVMAAEEVNVYSYRQPFLVEPMFKEFTKETGIKVNVKFAKKGLAEKLAQEGELSPADVILTTD ISRLAELTNKKLVQPVDSKTIDANVPAQYRDADDEWFALTLRARNVYSSRDRVGKLGADFDYADLANPEWKGKICTRSGK HPYNVSLVSSMIAHHGEAEAKTWLEGLKANLARKPQGNDRAQVKAIKEGLCDVALGNSYYLGKMVNDPKQVSWAESVYIN FPNQNTDGTHVNISGMAMAKYAPNKDNALKLMEFLTGDVAQGMYAEVNYEYPVKPSVKPSELVASWGEFKADTLPLDDIA DNHTKAIKLLDEVKFDL >Mature_337_residues MKKLLSVSALIAGVFAPSVMAAEEVNVYSYRQPFLVEPMFKEFTKETGIKVNVKFAKKGLAEKLAQEGELSPADVILTTD ISRLAELTNKKLVQPVDSKTIDANVPAQYRDADDEWFALTLRARNVYSSRDRVGKLGADFDYADLANPEWKGKICTRSGK HPYNVSLVSSMIAHHGEAEAKTWLEGLKANLARKPQGNDRAQVKAIKEGLCDVALGNSYYLGKMVNDPKQVSWAESVYIN FPNQNTDGTHVNISGMAMAKYAPNKDNALKLMEFLTGDVAQGMYAEVNYEYPVKPSVKPSELVASWGEFKADTLPLDDIA DNHTKAIKLLDEVKFDL
Specific function: A major iron-binding protein involved in Fe(3+) uptake, probably part of a periplasmic ABC transporter complex futA1A2BC (TC 3.A.1.10.2) involved in Fe(3+) ion import (ferric iron). This protein and futA2 (slr0531) may be subunit proteins that have redund
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cellular thylakoid membrane; Lipid-anchor (Potential). Cell membrane; Lipid-anchor (Potential). Note=Localization to the periplasm was not detected in PubMed:12368463 [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37301; Mature: 37301
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLSVSALIAGVFAPSVMAAEEVNVYSYRQPFLVEPMFKEFTKETGIKVNVKFAKKGL CCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEECHHHHHHHHHCCCEEEEHHHHHHH AEKLAQEGELSPADVILTTDISRLAELTNKKLVQPVDSKTIDANVPAQYRDADDEWFALT HHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCEEEEE LRARNVYSSRDRVGKLGADFDYADLANPEWKGKICTRSGKHPYNVSLVSSMIAHHGEAEA EEECHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCHHH KTWLEGLKANLARKPQGNDRAQVKAIKEGLCDVALGNSYYLGKMVNDPKQVSWAESVYIN HHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHEEECCCEEECCCCCCCHHCEEEEEEEEE FPNQNTDGTHVNISGMAMAKYAPNKDNALKLMEFLTGDVAQGMYAEVNYEYPVKPSVKPS CCCCCCCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHH ELVASWGEFKADTLPLDDIADNHTKAIKLLDEVKFDL HHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKKLLSVSALIAGVFAPSVMAAEEVNVYSYRQPFLVEPMFKEFTKETGIKVNVKFAKKGL CCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEECHHHHHHHHHCCCEEEEHHHHHHH AEKLAQEGELSPADVILTTDISRLAELTNKKLVQPVDSKTIDANVPAQYRDADDEWFALT HHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCEEEEE LRARNVYSSRDRVGKLGADFDYADLANPEWKGKICTRSGKHPYNVSLVSSMIAHHGEAEA EEECHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCHHH KTWLEGLKANLARKPQGNDRAQVKAIKEGLCDVALGNSYYLGKMVNDPKQVSWAESVYIN HHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHEEECCCEEECCCCCCCHHCEEEEEEEEE FPNQNTDGTHVNISGMAMAKYAPNKDNALKLMEFLTGDVAQGMYAEVNYEYPVKPSVKPS CCCCCCCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHH ELVASWGEFKADTLPLDDIADNHTKAIKLLDEVKFDL HHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]