| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is fbpB [H]
Identifier: 209696003
GI number: 209696003
Start: 2789815
End: 2791446
Strand: Reverse
Name: fbpB [H]
Synonym: VSAL_I2587
Alternate gene names: 209696003
Gene position: 2791446-2789815 (Counterclockwise)
Preceding gene: 209696004
Following gene: 209696002
Centisome position: 83.95
GC content: 38.73
Gene sequence:
>1632_bases ATGAAAGAAAAATTATTATTCTGGAAAACCAGTAGTTGGAGTATTTCTCTACTACTGGTTTTACCGATCCTAGCGATCTT ATATACCGCCCTTGGTAATACTGATGACATCTTTACGCACTTATTTAATACGGTGCTACCTACTTACACCTTAAATACGG TGTTATTAGTTTTTGGTGCGATGTTCTTCTCTCTTATTTTAGGTGTTCCTTCCGCATGGTTTATGGCTATGTGTCGTATC CCATCAGCTTCAGTTTTACAGTGGGCACTTGTGCTTCCTTTAGCTATGCCTGCATATATTGTCGGTTATATCTATACAGA CTGGTTAGATTTTGCTGGGCCAATTCAAATCCTTTTAAGGGATGTTTTTGGGTGGCAATCTTATTCTGATTATTGGTTTC CTGATATTCGGACATTAACTGGCGCGATTCTTGTTATGTCTCTTGTGCTGTATCCCTATGTGTATTTGCTTGCTCGTGCT GCCTTTATGGAGCAAAACATTAGCTTATTACAGTCAGCTCGTTTGTTAAAATGTACCCCGTGGGAAAGCTTTAAGCGTAT ATCGTTACCTTTAGCTCGACCTTCTATTGCTGTGGCTTTATCTTTAGTGGCGATGGAAGCTTTAGGGGATTTTGGTACGG TGAGTTATTTTGCGGTGAATACGTTAACTACCGCAGTTTACGATACGTGGTTAGGCTATTCCAATTTAAATGCAGCAGCG AAAGTATCAGCCTTCATGTTAATGGGCATTCTTTTATTGATCAGTGGTGAGCGTTATAGTCGTCGTAAGCAAAAAATGTT TCAAGAAAAATTTAATACGAATGAAGAGTTTCAATATGAACTTCATGGATGGAAAAAATGGGCTGCATTTATGTGGTGCT GGGGACTAGTATCTATCGCTTTTATTCTCCCTTTGCTGCAACTGATTAGTTATTCTATTGATTATTTTGACGAAAGTTGG ACTGGTGAATTTCAGCAATACGCATTAAATAGTTTATATGTTTCATCCATTGCCGCGATCATTGCTGTGTTAATCGCTTT AGTTGTTAATTTTTTATACCGCTTGCATCCAAGCAGTAAGTGGAGTGTGGTCCCGATGCGTTTAGCTTCTTTAGGTTATG CGGTTCCTGGAACGGTACTTGCTATTGGTGTAATGCTTCCGATGATTAGCTTAGATCATTTTGTTAATGATGTATCTAAA CAACTTGGTTTTGGTGTGATTGGATTAGTTTTTTCAGGTTCTATTTTTGCGCTGATTTTTGCTTCTGTTGTGCGATTTTC TGCCGTTGCTATTGGCTCTATTGAAAGTAATTTAAATAAAATCCCACCGTCATTAGACATGGCATCGCGCACTTTAGGTT GTGGAACATGGTCTATGCTACGTCGAGTTCATTTCCCATTAATTCGTCGTGGTTGTTTAATCGCTGGCTTATTGGTCTTT ATTGAAACCATGAAAGAGTTGAATGCTGCACTATTGCTGCGCCCATTTAACTTTGAGACTTTGGCAACATATGTATTTAA TTTTGCTTCTGATGAGCAATTAGAAATTGCAGCGATGCCTGCGGTATTATTGGTTTTGGTTGGATTGATCCCATTGATCA TTGTTAACCGTTCTTTGGAGCGACATCATTAA
Upstream 100 bases:
>100_bases AAACTTTTAGATGAAGTGAAGTTTGATCTTTAATTTGATATTTACTATTGGTGAGGTAACAATACCTCATCATTTTTAAA AGAGCCTTGTTGTTTAGGCA
Downstream 100 bases:
>100_bases TGAACTCTGCACTATCTATATCTAATTTAACTTGTAGTTACCATGATCAGAATATCCTAACTCAGTTATCATTAACGGTT GAATCCGGTGAAATTGTTTG
Product: iron(III) ABC transporter permease protein
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]
Number of amino acids: Translated: 543; Mature: 543
Protein sequence:
>543_residues MKEKLLFWKTSSWSISLLLVLPILAILYTALGNTDDIFTHLFNTVLPTYTLNTVLLVFGAMFFSLILGVPSAWFMAMCRI PSASVLQWALVLPLAMPAYIVGYIYTDWLDFAGPIQILLRDVFGWQSYSDYWFPDIRTLTGAILVMSLVLYPYVYLLARA AFMEQNISLLQSARLLKCTPWESFKRISLPLARPSIAVALSLVAMEALGDFGTVSYFAVNTLTTAVYDTWLGYSNLNAAA KVSAFMLMGILLLISGERYSRRKQKMFQEKFNTNEEFQYELHGWKKWAAFMWCWGLVSIAFILPLLQLISYSIDYFDESW TGEFQQYALNSLYVSSIAAIIAVLIALVVNFLYRLHPSSKWSVVPMRLASLGYAVPGTVLAIGVMLPMISLDHFVNDVSK QLGFGVIGLVFSGSIFALIFASVVRFSAVAIGSIESNLNKIPPSLDMASRTLGCGTWSMLRRVHFPLIRRGCLIAGLLVF IETMKELNAALLLRPFNFETLATYVFNFASDEQLEIAAMPAVLLVLVGLIPLIIVNRSLERHH
Sequences:
>Translated_543_residues MKEKLLFWKTSSWSISLLLVLPILAILYTALGNTDDIFTHLFNTVLPTYTLNTVLLVFGAMFFSLILGVPSAWFMAMCRI PSASVLQWALVLPLAMPAYIVGYIYTDWLDFAGPIQILLRDVFGWQSYSDYWFPDIRTLTGAILVMSLVLYPYVYLLARA AFMEQNISLLQSARLLKCTPWESFKRISLPLARPSIAVALSLVAMEALGDFGTVSYFAVNTLTTAVYDTWLGYSNLNAAA KVSAFMLMGILLLISGERYSRRKQKMFQEKFNTNEEFQYELHGWKKWAAFMWCWGLVSIAFILPLLQLISYSIDYFDESW TGEFQQYALNSLYVSSIAAIIAVLIALVVNFLYRLHPSSKWSVVPMRLASLGYAVPGTVLAIGVMLPMISLDHFVNDVSK QLGFGVIGLVFSGSIFALIFASVVRFSAVAIGSIESNLNKIPPSLDMASRTLGCGTWSMLRRVHFPLIRRGCLIAGLLVF IETMKELNAALLLRPFNFETLATYVFNFASDEQLEIAAMPAVLLVLVGLIPLIIVNRSLERHH >Mature_543_residues MKEKLLFWKTSSWSISLLLVLPILAILYTALGNTDDIFTHLFNTVLPTYTLNTVLLVFGAMFFSLILGVPSAWFMAMCRI PSASVLQWALVLPLAMPAYIVGYIYTDWLDFAGPIQILLRDVFGWQSYSDYWFPDIRTLTGAILVMSLVLYPYVYLLARA AFMEQNISLLQSARLLKCTPWESFKRISLPLARPSIAVALSLVAMEALGDFGTVSYFAVNTLTTAVYDTWLGYSNLNAAA KVSAFMLMGILLLISGERYSRRKQKMFQEKFNTNEEFQYELHGWKKWAAFMWCWGLVSIAFILPLLQLISYSIDYFDESW TGEFQQYALNSLYVSSIAAIIAVLIALVVNFLYRLHPSSKWSVVPMRLASLGYAVPGTVLAIGVMLPMISLDHFVNDVSK QLGFGVIGLVFSGSIFALIFASVVRFSAVAIGSIESNLNKIPPSLDMASRTLGCGTWSMLRRVHFPLIRRGCLIAGLLVF IETMKELNAALLLRPFNFETLATYVFNFASDEQLEIAAMPAVLLVLVGLIPLIIVNRSLERHH
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 60907; Mature: 60907
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKLLFWKTSSWSISLLLVLPILAILYTALGNTDDIFTHLFNTVLPTYTLNTVLLVFGA CCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MFFSLILGVPSAWFMAMCRIPSASVLQWALVLPLAMPAYIVGYIYTDWLDFAGPIQILLR HHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH DVFGWQSYSDYWFPDIRTLTGAILVMSLVLYPYVYLLARAAFMEQNISLLQSARLLKCTP HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC WESFKRISLPLARPSIAVALSLVAMEALGDFGTVSYFAVNTLTTAVYDTWLGYSNLNAAA HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH KVSAFMLMGILLLISGERYSRRKQKMFQEKFNTNEEFQYELHGWKKWAAFMWCWGLVSIA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH FILPLLQLISYSIDYFDESWTGEFQQYALNSLYVSSIAAIIAVLIALVVNFLYRLHPSSK HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC WSVVPMRLASLGYAVPGTVLAIGVMLPMISLDHFVNDVSKQLGFGVIGLVFSGSIFALIF CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ASVVRFSAVAIGSIESNLNKIPPSLDMASRTLGCGTWSMLRRVHFPLIRRGCLIAGLLVF HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IETMKELNAALLLRPFNFETLATYVFNFASDEQLEIAAMPAVLLVLVGLIPLIIVNRSLE HHHHHHHCHHHEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH RHH CCC >Mature Secondary Structure MKEKLLFWKTSSWSISLLLVLPILAILYTALGNTDDIFTHLFNTVLPTYTLNTVLLVFGA CCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MFFSLILGVPSAWFMAMCRIPSASVLQWALVLPLAMPAYIVGYIYTDWLDFAGPIQILLR HHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH DVFGWQSYSDYWFPDIRTLTGAILVMSLVLYPYVYLLARAAFMEQNISLLQSARLLKCTP HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC WESFKRISLPLARPSIAVALSLVAMEALGDFGTVSYFAVNTLTTAVYDTWLGYSNLNAAA HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH KVSAFMLMGILLLISGERYSRRKQKMFQEKFNTNEEFQYELHGWKKWAAFMWCWGLVSIA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH FILPLLQLISYSIDYFDESWTGEFQQYALNSLYVSSIAAIIAVLIALVVNFLYRLHPSSK HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC WSVVPMRLASLGYAVPGTVLAIGVMLPMISLDHFVNDVSKQLGFGVIGLVFSGSIFALIF CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ASVVRFSAVAIGSIESNLNKIPPSLDMASRTLGCGTWSMLRRVHFPLIRRGCLIAGLLVF HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IETMKELNAALLLRPFNFETLATYVFNFASDEQLEIAAMPAVLLVLVGLIPLIIVNRSLE HHHHHHHCHHHEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH RHH CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717 [H]