Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is fbpB [H]

Identifier: 209696003

GI number: 209696003

Start: 2789815

End: 2791446

Strand: Reverse

Name: fbpB [H]

Synonym: VSAL_I2587

Alternate gene names: 209696003

Gene position: 2791446-2789815 (Counterclockwise)

Preceding gene: 209696004

Following gene: 209696002

Centisome position: 83.95

GC content: 38.73

Gene sequence:

>1632_bases
ATGAAAGAAAAATTATTATTCTGGAAAACCAGTAGTTGGAGTATTTCTCTACTACTGGTTTTACCGATCCTAGCGATCTT
ATATACCGCCCTTGGTAATACTGATGACATCTTTACGCACTTATTTAATACGGTGCTACCTACTTACACCTTAAATACGG
TGTTATTAGTTTTTGGTGCGATGTTCTTCTCTCTTATTTTAGGTGTTCCTTCCGCATGGTTTATGGCTATGTGTCGTATC
CCATCAGCTTCAGTTTTACAGTGGGCACTTGTGCTTCCTTTAGCTATGCCTGCATATATTGTCGGTTATATCTATACAGA
CTGGTTAGATTTTGCTGGGCCAATTCAAATCCTTTTAAGGGATGTTTTTGGGTGGCAATCTTATTCTGATTATTGGTTTC
CTGATATTCGGACATTAACTGGCGCGATTCTTGTTATGTCTCTTGTGCTGTATCCCTATGTGTATTTGCTTGCTCGTGCT
GCCTTTATGGAGCAAAACATTAGCTTATTACAGTCAGCTCGTTTGTTAAAATGTACCCCGTGGGAAAGCTTTAAGCGTAT
ATCGTTACCTTTAGCTCGACCTTCTATTGCTGTGGCTTTATCTTTAGTGGCGATGGAAGCTTTAGGGGATTTTGGTACGG
TGAGTTATTTTGCGGTGAATACGTTAACTACCGCAGTTTACGATACGTGGTTAGGCTATTCCAATTTAAATGCAGCAGCG
AAAGTATCAGCCTTCATGTTAATGGGCATTCTTTTATTGATCAGTGGTGAGCGTTATAGTCGTCGTAAGCAAAAAATGTT
TCAAGAAAAATTTAATACGAATGAAGAGTTTCAATATGAACTTCATGGATGGAAAAAATGGGCTGCATTTATGTGGTGCT
GGGGACTAGTATCTATCGCTTTTATTCTCCCTTTGCTGCAACTGATTAGTTATTCTATTGATTATTTTGACGAAAGTTGG
ACTGGTGAATTTCAGCAATACGCATTAAATAGTTTATATGTTTCATCCATTGCCGCGATCATTGCTGTGTTAATCGCTTT
AGTTGTTAATTTTTTATACCGCTTGCATCCAAGCAGTAAGTGGAGTGTGGTCCCGATGCGTTTAGCTTCTTTAGGTTATG
CGGTTCCTGGAACGGTACTTGCTATTGGTGTAATGCTTCCGATGATTAGCTTAGATCATTTTGTTAATGATGTATCTAAA
CAACTTGGTTTTGGTGTGATTGGATTAGTTTTTTCAGGTTCTATTTTTGCGCTGATTTTTGCTTCTGTTGTGCGATTTTC
TGCCGTTGCTATTGGCTCTATTGAAAGTAATTTAAATAAAATCCCACCGTCATTAGACATGGCATCGCGCACTTTAGGTT
GTGGAACATGGTCTATGCTACGTCGAGTTCATTTCCCATTAATTCGTCGTGGTTGTTTAATCGCTGGCTTATTGGTCTTT
ATTGAAACCATGAAAGAGTTGAATGCTGCACTATTGCTGCGCCCATTTAACTTTGAGACTTTGGCAACATATGTATTTAA
TTTTGCTTCTGATGAGCAATTAGAAATTGCAGCGATGCCTGCGGTATTATTGGTTTTGGTTGGATTGATCCCATTGATCA
TTGTTAACCGTTCTTTGGAGCGACATCATTAA

Upstream 100 bases:

>100_bases
AAACTTTTAGATGAAGTGAAGTTTGATCTTTAATTTGATATTTACTATTGGTGAGGTAACAATACCTCATCATTTTTAAA
AGAGCCTTGTTGTTTAGGCA

Downstream 100 bases:

>100_bases
TGAACTCTGCACTATCTATATCTAATTTAACTTGTAGTTACCATGATCAGAATATCCTAACTCAGTTATCATTAACGGTT
GAATCCGGTGAAATTGTTTG

Product: iron(III) ABC transporter permease protein

Products: ADP; phosphate; MoO42- [Cytoplasm] [C]

Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MKEKLLFWKTSSWSISLLLVLPILAILYTALGNTDDIFTHLFNTVLPTYTLNTVLLVFGAMFFSLILGVPSAWFMAMCRI
PSASVLQWALVLPLAMPAYIVGYIYTDWLDFAGPIQILLRDVFGWQSYSDYWFPDIRTLTGAILVMSLVLYPYVYLLARA
AFMEQNISLLQSARLLKCTPWESFKRISLPLARPSIAVALSLVAMEALGDFGTVSYFAVNTLTTAVYDTWLGYSNLNAAA
KVSAFMLMGILLLISGERYSRRKQKMFQEKFNTNEEFQYELHGWKKWAAFMWCWGLVSIAFILPLLQLISYSIDYFDESW
TGEFQQYALNSLYVSSIAAIIAVLIALVVNFLYRLHPSSKWSVVPMRLASLGYAVPGTVLAIGVMLPMISLDHFVNDVSK
QLGFGVIGLVFSGSIFALIFASVVRFSAVAIGSIESNLNKIPPSLDMASRTLGCGTWSMLRRVHFPLIRRGCLIAGLLVF
IETMKELNAALLLRPFNFETLATYVFNFASDEQLEIAAMPAVLLVLVGLIPLIIVNRSLERHH

Sequences:

>Translated_543_residues
MKEKLLFWKTSSWSISLLLVLPILAILYTALGNTDDIFTHLFNTVLPTYTLNTVLLVFGAMFFSLILGVPSAWFMAMCRI
PSASVLQWALVLPLAMPAYIVGYIYTDWLDFAGPIQILLRDVFGWQSYSDYWFPDIRTLTGAILVMSLVLYPYVYLLARA
AFMEQNISLLQSARLLKCTPWESFKRISLPLARPSIAVALSLVAMEALGDFGTVSYFAVNTLTTAVYDTWLGYSNLNAAA
KVSAFMLMGILLLISGERYSRRKQKMFQEKFNTNEEFQYELHGWKKWAAFMWCWGLVSIAFILPLLQLISYSIDYFDESW
TGEFQQYALNSLYVSSIAAIIAVLIALVVNFLYRLHPSSKWSVVPMRLASLGYAVPGTVLAIGVMLPMISLDHFVNDVSK
QLGFGVIGLVFSGSIFALIFASVVRFSAVAIGSIESNLNKIPPSLDMASRTLGCGTWSMLRRVHFPLIRRGCLIAGLLVF
IETMKELNAALLLRPFNFETLATYVFNFASDEQLEIAAMPAVLLVLVGLIPLIIVNRSLERHH
>Mature_543_residues
MKEKLLFWKTSSWSISLLLVLPILAILYTALGNTDDIFTHLFNTVLPTYTLNTVLLVFGAMFFSLILGVPSAWFMAMCRI
PSASVLQWALVLPLAMPAYIVGYIYTDWLDFAGPIQILLRDVFGWQSYSDYWFPDIRTLTGAILVMSLVLYPYVYLLARA
AFMEQNISLLQSARLLKCTPWESFKRISLPLARPSIAVALSLVAMEALGDFGTVSYFAVNTLTTAVYDTWLGYSNLNAAA
KVSAFMLMGILLLISGERYSRRKQKMFQEKFNTNEEFQYELHGWKKWAAFMWCWGLVSIAFILPLLQLISYSIDYFDESW
TGEFQQYALNSLYVSSIAAIIAVLIALVVNFLYRLHPSSKWSVVPMRLASLGYAVPGTVLAIGVMLPMISLDHFVNDVSK
QLGFGVIGLVFSGSIFALIFASVVRFSAVAIGSIESNLNKIPPSLDMASRTLGCGTWSMLRRVHFPLIRRGCLIAGLLVF
IETMKELNAALLLRPFNFETLATYVFNFASDEQLEIAAMPAVLLVLVGLIPLIIVNRSLERHH

Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1178

COG function: function code P; ABC-type Fe3+ transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transmembrane type-1 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 60907; Mature: 60907

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKLLFWKTSSWSISLLLVLPILAILYTALGNTDDIFTHLFNTVLPTYTLNTVLLVFGA
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MFFSLILGVPSAWFMAMCRIPSASVLQWALVLPLAMPAYIVGYIYTDWLDFAGPIQILLR
HHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
DVFGWQSYSDYWFPDIRTLTGAILVMSLVLYPYVYLLARAAFMEQNISLLQSARLLKCTP
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
WESFKRISLPLARPSIAVALSLVAMEALGDFGTVSYFAVNTLTTAVYDTWLGYSNLNAAA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
KVSAFMLMGILLLISGERYSRRKQKMFQEKFNTNEEFQYELHGWKKWAAFMWCWGLVSIA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
FILPLLQLISYSIDYFDESWTGEFQQYALNSLYVSSIAAIIAVLIALVVNFLYRLHPSSK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WSVVPMRLASLGYAVPGTVLAIGVMLPMISLDHFVNDVSKQLGFGVIGLVFSGSIFALIF
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ASVVRFSAVAIGSIESNLNKIPPSLDMASRTLGCGTWSMLRRVHFPLIRRGCLIAGLLVF
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IETMKELNAALLLRPFNFETLATYVFNFASDEQLEIAAMPAVLLVLVGLIPLIIVNRSLE
HHHHHHHCHHHEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
RHH
CCC
>Mature Secondary Structure
MKEKLLFWKTSSWSISLLLVLPILAILYTALGNTDDIFTHLFNTVLPTYTLNTVLLVFGA
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MFFSLILGVPSAWFMAMCRIPSASVLQWALVLPLAMPAYIVGYIYTDWLDFAGPIQILLR
HHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
DVFGWQSYSDYWFPDIRTLTGAILVMSLVLYPYVYLLARAAFMEQNISLLQSARLLKCTP
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
WESFKRISLPLARPSIAVALSLVAMEALGDFGTVSYFAVNTLTTAVYDTWLGYSNLNAAA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
KVSAFMLMGILLLISGERYSRRKQKMFQEKFNTNEEFQYELHGWKKWAAFMWCWGLVSIA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
FILPLLQLISYSIDYFDESWTGEFQQYALNSLYVSSIAAIIAVLIALVVNFLYRLHPSSK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WSVVPMRLASLGYAVPGTVLAIGVMLPMISLDHFVNDVSKQLGFGVIGLVFSGSIFALIF
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ASVVRFSAVAIGSIESNLNKIPPSLDMASRTLGCGTWSMLRRVHFPLIRRGCLIAGLLVF
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IETMKELNAALLLRPFNFETLATYVFNFASDEQLEIAAMPAVLLVLVGLIPLIIVNRSLE
HHHHHHHCHHHEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
RHH
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; MoO42- [Periplasm]; H2O [C]

Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 7927717 [H]