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The map label for this gene is ybjY [C]

Identifier: 209695987

GI number: 209695987

Start: 2764687

End: 2765799

Strand: Reverse

Name: ybjY [C]

Synonym: VSAL_I2570

Alternate gene names: 209695987

Gene position: 2765799-2764687 (Counterclockwise)

Preceding gene: 209695988

Following gene: 209695986

Centisome position: 83.18

GC content: 38.81

Gene sequence:

>1113_bases
ATGGGTAAATTCACATCTGCTTTTTTTTCATACCTCGTTCATCGCCCTTGGATTATTTCGTCCATTTTATTTTGTTGTTT
ATTATTCTGGGTATTAAGTGGACCTTCTCAAGCTGAAGAATCTACGAGAAAACAAACACTAAATACGCTCACTATTCCTC
TTGCTAATGTTGTTGTTGAAATTTTTTCATCAACGCCAACGAACCGTACTATTTCTTTATATGGGCGCACAGCTCCTGAT
CGTGAAACGACGCTTGGGGCTCAAGTTGCGGCTCAAATTGAAGAAATTCTAGTTAAAAAAGGGGCTCAAGTAAAAAAAGA
ACAGCCAATAGCTCGTCTTGATATGGCCGATCTTGATTTGCAACTTAGTCAAGTTAAAGCCATTTATTCTGTTCGAATGA
AAGAATTTAAAGCCTCGAAAGAGTTACGACGCAAAGGATTACAAGGTGAGGTCGCTTTTAGTCAATCTCAAGCTTCATTA
GCCGAAGCGAAAGCCAGAGTTAGAAATGCAGAATTAATATTAAAAAATACCACGATAGTTGCGCCATTTGATGGGATTGT
TGAACATTTGTTTGTGGAAGTTGGCGATTTTGTGAGTCGAGGAGATCCAGTTGCAAAAGTGGTGGTGCTTGATCCACTAG
TGATCGAAGTAAATGTGAGTGAAAGACACATTATTCAATTGAATGTAAATCAAAAAACAAGGGTGAGTTTTATTAATGAC
TCTTCAATTGAAGGGCGCGTTCGTTATATATCGAGGGTTTCTTCGATTTCGACAAATACGTTTCCTGTTGAAATCGAAAT
TCCCAATATAGGAGATCGATTACCCGCAGGAATAAGCACTGAAGTTGAGATCGATTTAGATCTTCAACCGGCCATTAAAA
TTACACCAGCCATGCTTTCGCTTAATGAAAATGGAGATCTCGGCGTTAAAACGGTAGTCCAATCGATGGGCAGTCAAGAA
AGCACTGATCAGGTGAAATTTATTCCCATTCAATTAGTAAAAGCAGAAGATGATGGAGTGTGGTTGACAGGGTTAGGCGA
ATTAGTTGAAATCATTACGGTTGGACAAGGATTTGTTCGCGATGGTGATTTTATTCATGCGAGAAGAAAGTAA

Upstream 100 bases:

>100_bases
TTTTCGTTTACCTTATTCTCTGCTTTGTAAAACGACATAACTTACAGTAAATCAGGATGTATTACTGTTTACCTATTCCT
AAGCACTAAGGATTGTTGCT

Downstream 100 bases:

>100_bases
GGGAATACTATGCTAGCAATTATTAATGCGGCATTAAGTCGTTCTCGGACGATGTTAATGTTACTTACTTTACTGCTTAT
TTCTGGTGCGTTGACATACA

Product: hypothetical protein

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD; Membrane-Fusion Protein; HlyD Family Secretion Protein; RND Efflux System Membrane Fusion Protein; RND Efflux Membrane Fusion Protein; Transporter Protein; Multidrug Efflux Transporter VexE; Efflux System Protein; Multidrug ABC Transporter; Periplasmic Component Of Efflux System; HlyD-Family Secretion Protein; Membrane Fusion Protein; Co/Zn/Cd Efflux System Membrane Fusion Protein; Auxiliary Transport Protein MFP Family; Multidrug Efflux System Inner Membrane Protein; HlyD-Like Secretion Protein; Periplasmic Linker Protein; Membrane-Fusion Protein AcrA; Efflux Transporter; Secretion Protein Family Hlyd; Efflux Transporter Rnd Family Mfp Subunit; Lipoprotein

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MGKFTSAFFSYLVHRPWIISSILFCCLLFWVLSGPSQAEESTRKQTLNTLTIPLANVVVEIFSSTPTNRTISLYGRTAPD
RETTLGAQVAAQIEEILVKKGAQVKKEQPIARLDMADLDLQLSQVKAIYSVRMKEFKASKELRRKGLQGEVAFSQSQASL
AEAKARVRNAELILKNTTIVAPFDGIVEHLFVEVGDFVSRGDPVAKVVVLDPLVIEVNVSERHIIQLNVNQKTRVSFIND
SSIEGRVRYISRVSSISTNTFPVEIEIPNIGDRLPAGISTEVEIDLDLQPAIKITPAMLSLNENGDLGVKTVVQSMGSQE
STDQVKFIPIQLVKAEDDGVWLTGLGELVEIITVGQGFVRDGDFIHARRK

Sequences:

>Translated_370_residues
MGKFTSAFFSYLVHRPWIISSILFCCLLFWVLSGPSQAEESTRKQTLNTLTIPLANVVVEIFSSTPTNRTISLYGRTAPD
RETTLGAQVAAQIEEILVKKGAQVKKEQPIARLDMADLDLQLSQVKAIYSVRMKEFKASKELRRKGLQGEVAFSQSQASL
AEAKARVRNAELILKNTTIVAPFDGIVEHLFVEVGDFVSRGDPVAKVVVLDPLVIEVNVSERHIIQLNVNQKTRVSFIND
SSIEGRVRYISRVSSISTNTFPVEIEIPNIGDRLPAGISTEVEIDLDLQPAIKITPAMLSLNENGDLGVKTVVQSMGSQE
STDQVKFIPIQLVKAEDDGVWLTGLGELVEIITVGQGFVRDGDFIHARRK
>Mature_369_residues
GKFTSAFFSYLVHRPWIISSILFCCLLFWVLSGPSQAEESTRKQTLNTLTIPLANVVVEIFSSTPTNRTISLYGRTAPDR
ETTLGAQVAAQIEEILVKKGAQVKKEQPIARLDMADLDLQLSQVKAIYSVRMKEFKASKELRRKGLQGEVAFSQSQASLA
EAKARVRNAELILKNTTIVAPFDGIVEHLFVEVGDFVSRGDPVAKVVVLDPLVIEVNVSERHIIQLNVNQKTRVSFINDS
SIEGRVRYISRVSSISTNTFPVEIEIPNIGDRLPAGISTEVEIDLDLQPAIKITPAMLSLNENGDLGVKTVVQSMGSQES
TDQVKFIPIQLVKAEDDGVWLTGLGELVEIITVGQGFVRDGDFIHARRK

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40846; Mature: 40714

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKFTSAFFSYLVHRPWIISSILFCCLLFWVLSGPSQAEESTRKQTLNTLTIPLANVVVE
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IFSSTPTNRTISLYGRTAPDRETTLGAQVAAQIEEILVKKGAQVKKEQPIARLDMADLDL
HHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHCCHHHCCH
QLSQVKAIYSVRMKEFKASKELRRKGLQGEVAFSQSQASLAEAKARVRNAELILKNTTIV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHCCCEEEEECCEEE
APFDGIVEHLFVEVGDFVSRGDPVAKVVVLDPLVIEVNVSERHIIQLNVNQKTRVSFIND
ECHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCEEEEEEECCCCEEEEEECC
SSIEGRVRYISRVSSISTNTFPVEIEIPNIGDRLPAGISTEVEIDLDLQPAIKITPAMLS
CCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEE
LNENGDLGVKTVVQSMGSQESTDQVKFIPIQLVKAEDDGVWLTGLGELVEIITVGQGFVR
ECCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCEEEECHHHHHHHHHCCCCCCC
DGDFIHARRK
CCCEEECCCC
>Mature Secondary Structure 
GKFTSAFFSYLVHRPWIISSILFCCLLFWVLSGPSQAEESTRKQTLNTLTIPLANVVVE
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IFSSTPTNRTISLYGRTAPDRETTLGAQVAAQIEEILVKKGAQVKKEQPIARLDMADLDL
HHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHCCHHHCCH
QLSQVKAIYSVRMKEFKASKELRRKGLQGEVAFSQSQASLAEAKARVRNAELILKNTTIV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHCCCEEEEECCEEE
APFDGIVEHLFVEVGDFVSRGDPVAKVVVLDPLVIEVNVSERHIIQLNVNQKTRVSFIND
ECHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCEEEEEEECCCCEEEEEECC
SSIEGRVRYISRVSSISTNTFPVEIEIPNIGDRLPAGISTEVEIDLDLQPAIKITPAMLS
CCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEE
LNENGDLGVKTVVQSMGSQESTDQVKFIPIQLVKAEDDGVWLTGLGELVEIITVGQGFVR
ECCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCEEEECHHHHHHHHHCCCCCCC
DGDFIHARRK
CCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA