| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is mtnN
Identifier: 209695982
GI number: 209695982
Start: 2757664
End: 2758359
Strand: Direct
Name: mtnN
Synonym: VSAL_I2565
Alternate gene names: 209695982
Gene position: 2757664-2758359 (Clockwise)
Preceding gene: 209695981
Following gene: 209695983
Centisome position: 82.93
GC content: 39.51
Gene sequence:
>696_bases ATGAAAATCGGTATTATTGGTGCAATGGAACAAGAAGTTGCCATTCTAAAAGAACAAATTAATGGCTTAGCGACAACAAT CAAAGCTGGTTGTACTTTTCATACAGGCACATTGAATGGTGCTGAAGTCGTTTTACTTCAATCAGGCATTGGTAAAGTAG CGGCAGCCGTAGGGACAACTCTTCTTATCTCAGATCATAATGTAGATGTTGTTCTTAATACTGGCTCTGCTGGTGGGTTT GATTCTTCATTGAATCTTGGTGATGTCGTTATTTCTACAGAAGTTCGTCATCATGATGCTGATGTAACTGCATTTGGTTA CGAGATGGGACAGATGGCACAACAACCAGCTGCTTTTAAAGCAGATGAAAAACTAATGGCAGTCGCAGAAAAAGCATTGA CTCAAATGGAAGATAAGCATGCTGTACGTGGTTTAATCTGTACTGGTGATGCTTTTGTATGTACGCCTGAGCGCCAAGCA TTTATTCGCTCTCATTTTCCTTCTGTTATCGCTGTTGAAATGGAAGCGTCAGCCATTGCTCAAACTTGTCATCAATTTAG TGTTCCATTTGTTGTCGTTCGTGCAATATCTGATGTGGCAGATAAAGAATCACCAATGAGTTTTGAAGAATTCTTGCCTC TTGCTGCAGAAAGTTCATCAGAAATGGTGATGAAGATGGTTACTTTATTAAAGTAA
Upstream 100 bases:
>100_bases TCTCACTTTATCCTCTTTTATCTCAAGAAAACTCTTATTCCACCACCTTAAATAGCTATGTTACAATTCAGTTCTATTCG AACGTTACTGAGATAAACAA
Downstream 100 bases:
>100_bases TAACATAATAATGGAGTTAACGATTAGTTTGCTCCATTGTCCCTCTATATATAGTTAATACATATATGCTTGATAAACTG TCTTTCTTCATCGCCGATTA
Product: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Products: NA
Alternate protein names: MTA/SAH nucleosidase; MTAN; 5'-methylthioadenosine nucleosidase; MTA nucleosidase; S-adenosylhomocysteine nucleosidase; AdoHcy nucleosidase; SAH nucleosidase; SRH nucleosidase
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MKIGIIGAMEQEVAILKEQINGLATTIKAGCTFHTGTLNGAEVVLLQSGIGKVAAAVGTTLLISDHNVDVVLNTGSAGGF DSSLNLGDVVISTEVRHHDADVTAFGYEMGQMAQQPAAFKADEKLMAVAEKALTQMEDKHAVRGLICTGDAFVCTPERQA FIRSHFPSVIAVEMEASAIAQTCHQFSVPFVVVRAISDVADKESPMSFEEFLPLAAESSSEMVMKMVTLLK
Sequences:
>Translated_231_residues MKIGIIGAMEQEVAILKEQINGLATTIKAGCTFHTGTLNGAEVVLLQSGIGKVAAAVGTTLLISDHNVDVVLNTGSAGGF DSSLNLGDVVISTEVRHHDADVTAFGYEMGQMAQQPAAFKADEKLMAVAEKALTQMEDKHAVRGLICTGDAFVCTPERQA FIRSHFPSVIAVEMEASAIAQTCHQFSVPFVVVRAISDVADKESPMSFEEFLPLAAESSSEMVMKMVTLLK >Mature_231_residues MKIGIIGAMEQEVAILKEQINGLATTIKAGCTFHTGTLNGAEVVLLQSGIGKVAAAVGTTLLISDHNVDVVLNTGSAGGF DSSLNLGDVVISTEVRHHDADVTAFGYEMGQMAQQPAAFKADEKLMAVAEKALTQMEDKHAVRGLICTGDAFVCTPERQA FIRSHFPSVIAVEMEASAIAQTCHQFSVPFVVVRAISDVADKESPMSFEEFLPLAAESSSEMVMKMVTLLK
Specific function: Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/UDP phosphorylase family. MtnN subfamily
Homologues:
Organism=Escherichia coli, GI1786354, Length=230, Percent_Identity=57.8260869565217, Blast_Score=236, Evalue=9e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MTNN_ALISL (B6EKZ7)
Other databases:
- EMBL: FM178379 - RefSeq: YP_002263912.1 - GeneID: 6988169 - GenomeReviews: FM178379_GR - KEGG: vsa:VSAL_I2565 - HOGENOM: HBG367723 - OMA: AMEQEVT - ProtClustDB: PRK05584 - HAMAP: MF_01684 - InterPro: IPR010049 - InterPro: IPR018017 - InterPro: IPR000845 - PANTHER: PTHR21234 - TIGRFAMs: TIGR01704
Pfam domain/function: PF01048 PNP_UDP_1
EC number: =3.2.2.9
Molecular weight: Translated: 24531; Mature: 24531
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: ACT_SITE 12-12 BINDING 78-78 BINDING 198-198
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGIIGAMEQEVAILKEQINGLATTIKAGCTFHTGTLNGAEVVLLQSGIGKVAAAVGTT CEEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCHHHHHHHCCE LLISDHNVDVVLNTGSAGGFDSSLNLGDVVISTEVRHHDADVTAFGYEMGQMAQQPAAFK EEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCEEEHHHHHHHHHCCCCCCC ADEKLMAVAEKALTQMEDKHAVRGLICTGDAFVCTPERQAFIRSHFPSVIAVEMEASAIA CHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEECCHHHHHHHHCCCCEEEEEEHHHHHH QTCHQFSVPFVVVRAISDVADKESPMSFEEFLPLAAESSSEMVMKMVTLLK HHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKIGIIGAMEQEVAILKEQINGLATTIKAGCTFHTGTLNGAEVVLLQSGIGKVAAAVGTT CEEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCHHHHHHHCCE LLISDHNVDVVLNTGSAGGFDSSLNLGDVVISTEVRHHDADVTAFGYEMGQMAQQPAAFK EEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCEEEHHHHHHHHHCCCCCCC ADEKLMAVAEKALTQMEDKHAVRGLICTGDAFVCTPERQAFIRSHFPSVIAVEMEASAIA CHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEECCHHHHHHHHCCCCEEEEEEHHHHHH QTCHQFSVPFVVVRAISDVADKESPMSFEEFLPLAAESSSEMVMKMVTLLK HHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA