| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is yfeZ [C]
Identifier: 209695788
GI number: 209695788
Start: 2536415
End: 2536870
Strand: Reverse
Name: yfeZ [C]
Synonym: VSAL_I2362
Alternate gene names: 209695788
Gene position: 2536870-2536415 (Counterclockwise)
Preceding gene: 209695790
Following gene: 209695787
Centisome position: 76.29
GC content: 37.28
Gene sequence:
>456_bases ATGCAATATTCTTTCGATGCATACGATGAGCATGGGTGGCTAAAGCCACCGTTGTGGTTGTGGTTATGGTTTGGTTGGGT ACTATTGATTCGCTCTGTCGTCGTTTTTATCATGGCAGGTGCAAGTCGGCAGCAGGGAAATGATCTTCTTGCTCTGTTTT ATCCTAATCACTCTCATTTTTACATGAGTTTATGCATGAGCTTACCGATTGTATTTTTGATGTGGTTAAGTAATTTTAAA AAGCCCAATAGACCTTTTATGCAGACCCTTTGGAAGCAAGGTCGATGGCTAACTATTTTAATGGTAGTTATTGAGTTATC AATGTTAATACAGTCGATTGTTATTAACAGAGGAGAGTTCCAGCTAGAGAGTGCAGTGGTTATTTTATTACTTAGCTGGT TTTTGATTTTTTTATTCCGAAGCAAAAGAGTCAAAATATGCTTTAGTCTTACTTAA
Upstream 100 bases:
>100_bases AGCTAGCTCAAATTTTTAATTTTCTTCAATCGTTATTTTTAATCATTTAAGTAAGCTGAACAAGTCTACTTAGTGGTTTA TTTATTATTCAGGTAGATAA
Downstream 100 bases:
>100_bases GAGGGAAGACGATGGATTTATCAACAGGTGCACTTCTTTTTAGTGCTTTATTAAGCCCGTTAGCTATGGCTGATTGGCAG CTAGATTTGGGGTTAGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MQYSFDAYDEHGWLKPPLWLWLWFGWVLLIRSVVVFIMAGASRQQGNDLLALFYPNHSHFYMSLCMSLPIVFLMWLSNFK KPNRPFMQTLWKQGRWLTILMVVIELSMLIQSIVINRGEFQLESAVVILLLSWFLIFLFRSKRVKICFSLT
Sequences:
>Translated_151_residues MQYSFDAYDEHGWLKPPLWLWLWFGWVLLIRSVVVFIMAGASRQQGNDLLALFYPNHSHFYMSLCMSLPIVFLMWLSNFK KPNRPFMQTLWKQGRWLTILMVVIELSMLIQSIVINRGEFQLESAVVILLLSWFLIFLFRSKRVKICFSLT >Mature_151_residues MQYSFDAYDEHGWLKPPLWLWLWFGWVLLIRSVVVFIMAGASRQQGNDLLALFYPNHSHFYMSLCMSLPIVFLMWLSNFK KPNRPFMQTLWKQGRWLTILMVVIELSMLIQSIVINRGEFQLESAVVILLLSWFLIFLFRSKRVKICFSLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17999; Mature: 17999
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYSFDAYDEHGWLKPPLWLWLWFGWVLLIRSVVVFIMAGASRQQGNDLLALFYPNHSHF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHH YMSLCMSLPIVFLMWLSNFKKPNRPFMQTLWKQGRWLTILMVVIELSMLIQSIVINRGEF HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCH QLESAVVILLLSWFLIFLFRSKRVKICFSLT HHHHHHHHHHHHHHHHHHHHCCCEEEEEECC >Mature Secondary Structure MQYSFDAYDEHGWLKPPLWLWLWFGWVLLIRSVVVFIMAGASRQQGNDLLALFYPNHSHF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHH YMSLCMSLPIVFLMWLSNFKKPNRPFMQTLWKQGRWLTILMVVIELSMLIQSIVINRGEF HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCH QLESAVVILLLSWFLIFLFRSKRVKICFSLT HHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA