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The map label for this gene is napC [H]

Identifier: 209695790

GI number: 209695790

Start: 2537639

End: 2538214

Strand: Reverse

Name: napC [H]

Synonym: VSAL_I2364

Alternate gene names: 209695790

Gene position: 2538214-2537639 (Counterclockwise)

Preceding gene: 209695791

Following gene: 209695788

Centisome position: 76.33

GC content: 40.28

Gene sequence:

>576_bases
ATGAAATTTTTAAAAGCATTTTGGAAGCGTTTTTCTTCTCCAAGTAAAGCTGCAGTAGGTATCGTCCTATTTATGGGCTT
TATGGGGGGGTTGCTTTTTTGGGGTGCATTTAACACGGGTATGCAAGCAACGAACTCAGAAGAATTCTGTTCTGGTTGTC
ATGCTCCGATTGTTAAAGAGATCCAAGAAACCATTCACTATTCAAACCGATCTGGTGTTCGTGCTATCTGTTCTGATTGT
CACGTACCTCATAATTGGACAGATAAAATCGTACGTAAAGTTCAAGCATCAAAAGAATTGTTTGCTCATTACGTAACAAA
GACGATTGATACTGAAGAGAAGTTCAAAGAACGTCGGGGTCATTTAGCAGAGCGAGAATGGCATCGAATGAAAGAGAATA
ACTCTCAGGAATGTCGTAATTGCCATGAATTTAATTATATGGATTTCTCTGAGCAAGGCCCTCGTAGTGCGAAACAGCAT
TCAACGGCACTAGCATCAGGTGATAAAACATGTGTTGATTGTCATAAAGGTATTGCACATAAACTGCCTGATATGTCCGG
CGTTGAAGGGTGGTAA

Upstream 100 bases:

>100_bases
ATGTTCCTCAAGCGGATGCTAAACCACTGGTTGAGAATGAATTTAAACGTGTGGACTCATTGCGCTAGTTAATAGGCAAT
ACTGTTAAGAGAGGCTATAC

Downstream 100 bases:

>100_bases
GGAGCTTACTATGAGTACGTTAGAATCGGTTATTTGGCATACGTTAGGTTATATAGCGATGCCTTCAATAATCCTCGGTG
GATTTGTTGTTGTTGCTGTG

Product: cytochrome C protein NapC

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKFLKAFWKRFSSPSKAAVGIVLFMGFMGGLLFWGAFNTGMQATNSEEFCSGCHAPIVKEIQETIHYSNRSGVRAICSDC
HVPHNWTDKIVRKVQASKELFAHYVTKTIDTEEKFKERRGHLAEREWHRMKENNSQECRNCHEFNYMDFSEQGPRSAKQH
STALASGDKTCVDCHKGIAHKLPDMSGVEGW

Sequences:

>Translated_191_residues
MKFLKAFWKRFSSPSKAAVGIVLFMGFMGGLLFWGAFNTGMQATNSEEFCSGCHAPIVKEIQETIHYSNRSGVRAICSDC
HVPHNWTDKIVRKVQASKELFAHYVTKTIDTEEKFKERRGHLAEREWHRMKENNSQECRNCHEFNYMDFSEQGPRSAKQH
STALASGDKTCVDCHKGIAHKLPDMSGVEGW
>Mature_191_residues
MKFLKAFWKRFSSPSKAAVGIVLFMGFMGGLLFWGAFNTGMQATNSEEFCSGCHAPIVKEIQETIHYSNRSGVRAICSDC
HVPHNWTDKIVRKVQASKELFAHYVTKTIDTEEKFKERRGHLAEREWHRMKENNSQECRNCHEFNYMDFSEQGPRSAKQH
STALASGDKTCVDCHKGIAHKLPDMSGVEGW

Specific function: Mediates electron flow from quinones to the NapAB complex [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788530, Length=190, Percent_Identity=53.1578947368421, Blast_Score=221, Evalue=2e-59,
Organism=Escherichia coli, GI1787230, Length=186, Percent_Identity=41.3978494623656, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1788181, Length=147, Percent_Identity=38.7755102040816, Blast_Score=125, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011031
- InterPro:   IPR005126
- InterPro:   IPR011885 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 21791; Mature: 21791

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLKAFWKRFSSPSKAAVGIVLFMGFMGGLLFWGAFNTGMQATNSEEFCSGCHAPIVKE
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHH
IQETIHYSNRSGVRAICSDCHVPHNWTDKIVRKVQASKELFAHYVTKTIDTEEKFKERRG
HHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
HLAEREWHRMKENNSQECRNCHEFNYMDFSEQGPRSAKQHSTALASGDKTCVDCHKGIAH
CHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
KLPDMSGVEGW
HCCCCCCCCCC
>Mature Secondary Structure
MKFLKAFWKRFSSPSKAAVGIVLFMGFMGGLLFWGAFNTGMQATNSEEFCSGCHAPIVKE
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHH
IQETIHYSNRSGVRAICSDCHVPHNWTDKIVRKVQASKELFAHYVTKTIDTEEKFKERRG
HHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
HLAEREWHRMKENNSQECRNCHEFNYMDFSEQGPRSAKQHSTALASGDKTCVDCHKGIAH
CHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
KLPDMSGVEGW
HCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]