| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is cheV [H]
Identifier: 209695767
GI number: 209695767
Start: 2514564
End: 2515484
Strand: Reverse
Name: cheV [H]
Synonym: VSAL_I2340
Alternate gene names: 209695767
Gene position: 2515484-2514564 (Counterclockwise)
Preceding gene: 209695771
Following gene: 209695766
Centisome position: 75.65
GC content: 38.65
Gene sequence:
>921_bases ATGACAGGCATACTGGATTCGGTGAATCAGCGCACACAACTTGTAGGGCAAAACCGTTTAGAACTACTTACTTTCCGTCT TATGGGACGTCAACGTTATGGTATTAACGTTTTTAAAGTAAAAGAAGTATTACAGTGTCCGAAGTTGACTTCAATGCCAA ATTTAAATCCATTAGTAAAAGGAATTGCTCACATTCGAGGTCAAACGATCTCTGTGATTGATTTAAGTCTTGCAACTGGT GGGCGAGCAACAACAGATATTGATAAGTGTTTTATCATTATTTCAGAATTTAACCGTACCATTCAAGGCTTCCTTGTTAA GTCTGTTGAGCGTATTGTTAATATGCATTGGGAGGCAATTTTACCGCCACCACAAGGCACTGGACGAGCAAACTACTTAA CCGCAGTAACAAACATTGATGATGAATTAGTTGAAATCTTAGATGTAGAAAAGATTTTAGCTGAAATTGCGCCTATTGAT GAGACAATGAATGAAGAATTGGTTGAAGAAATGGCGTCGATCAGTCCAGAAGTGGTTCGTAGAGTATTGATCGCTGATGA TTCAAGTGTCGCTCGTAAGCAAGTGCAACGTGCCGTTCAATCGATTGGTTTTGAAACTATCATGGTAAAAGATGGTAAAG AAGCATTAGATAAATTAGTCGATATGGCAAATGCAGGTAGTGTATATGAACAAATTGGTTTGGTTATTTCCGATGTAGAA ATGCCTGAAATGGATGGTTATACACTAACGGCAGAAATTCGTCGTGAACCAGCATTGAAAGATCTACACGTTATTTTACA TACTTCATTAAGTGGTGTATTTAACCAAGCGATGGTTGAACGTGTCGGGGCAAACCAATTTATTGCGAAGTTTAACCCTG ATGAATTAGGGGCTGCTGTTAAAAGAGCAGTTGAGAAGTAG
Upstream 100 bases:
>100_bases ATCATATTTTTATTATAAAATGCCATATGGTATGCCGTGCTCTTGATGGGTTTGTGTTAGGCTCGCGGTTTATTTATCAT GGCACAAGATGGAGTCATAT
Downstream 100 bases:
>100_bases AGCCTGCCTGTTATTTTGTCACCTGTAAAGTAAGGTGACATTCATTTTATTATTTGGAAATTTATTCGTTAATGACAACT ATAACTATCAACGAACAAGA
Product: chemotaxis protein methyltransferase CheV
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTGILDSVNQRTQLVGQNRLELLTFRLMGRQRYGINVFKVKEVLQCPKLTSMPNLNPLVKGIAHIRGQTISVIDLSLATG GRATTDIDKCFIIISEFNRTIQGFLVKSVERIVNMHWEAILPPPQGTGRANYLTAVTNIDDELVEILDVEKILAEIAPID ETMNEELVEEMASISPEVVRRVLIADDSSVARKQVQRAVQSIGFETIMVKDGKEALDKLVDMANAGSVYEQIGLVISDVE MPEMDGYTLTAEIRREPALKDLHVILHTSLSGVFNQAMVERVGANQFIAKFNPDELGAAVKRAVEK
Sequences:
>Translated_306_residues MTGILDSVNQRTQLVGQNRLELLTFRLMGRQRYGINVFKVKEVLQCPKLTSMPNLNPLVKGIAHIRGQTISVIDLSLATG GRATTDIDKCFIIISEFNRTIQGFLVKSVERIVNMHWEAILPPPQGTGRANYLTAVTNIDDELVEILDVEKILAEIAPID ETMNEELVEEMASISPEVVRRVLIADDSSVARKQVQRAVQSIGFETIMVKDGKEALDKLVDMANAGSVYEQIGLVISDVE MPEMDGYTLTAEIRREPALKDLHVILHTSLSGVFNQAMVERVGANQFIAKFNPDELGAAVKRAVEK >Mature_305_residues TGILDSVNQRTQLVGQNRLELLTFRLMGRQRYGINVFKVKEVLQCPKLTSMPNLNPLVKGIAHIRGQTISVIDLSLATGG RATTDIDKCFIIISEFNRTIQGFLVKSVERIVNMHWEAILPPPQGTGRANYLTAVTNIDDELVEILDVEKILAEIAPIDE TMNEELVEEMASISPEVVRRVLIADDSSVARKQVQRAVQSIGFETIMVKDGKEALDKLVDMANAGSVYEQIGLVISDVEM PEMDGYTLTAEIRREPALKDLHVILHTSLSGVFNQAMVERVGANQFIAKFNPDELGAAVKRAVEK
Specific function: Chemotaxis involves both a phosphorylation-dependent excitation and a methylation-dependent adaptation. CheV and CheW function together to couple CheA activation to methyl-accepting chemotaxis protein receptor status and possible CheA-dependent phosphoryl
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=169, Percent_Identity=26.6272189349112, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 33912; Mature: 33781
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS50851 CHEW ; PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGILDSVNQRTQLVGQNRLELLTFRLMGRQRYGINVFKVKEVLQCPKLTSMPNLNPLVK CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHCCCHHHHHHHHHHCCCCCCCCCCCHHHH GIAHIRGQTISVIDLSLATGGRATTDIDKCFIIISEFNRTIQGFLVKSVERIVNMHWEAI HHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEE LPPPQGTGRANYLTAVTNIDDELVEILDVEKILAEIAPIDETMNEELVEEMASISPEVVR CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH RVLIADDSSVARKQVQRAVQSIGFETIMVKDGKEALDKLVDMANAGSVYEQIGLVISDVE HHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHCHHHCCCC MPEMDGYTLTAEIRREPALKDLHVILHTSLSGVFNQAMVERVGANQFIAKFNPDELGAAV CCCCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHH KRAVEK HHHHCC >Mature Secondary Structure TGILDSVNQRTQLVGQNRLELLTFRLMGRQRYGINVFKVKEVLQCPKLTSMPNLNPLVK CCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHCCCHHHHHHHHHHCCCCCCCCCCCHHHH GIAHIRGQTISVIDLSLATGGRATTDIDKCFIIISEFNRTIQGFLVKSVERIVNMHWEAI HHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEE LPPPQGTGRANYLTAVTNIDDELVEILDVEKILAEIAPIDETMNEELVEEMASISPEVVR CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH RVLIADDSSVARKQVQRAVQSIGFETIMVKDGKEALDKLVDMANAGSVYEQIGLVISDVE HHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHCHHHCCCC MPEMDGYTLTAEIRREPALKDLHVILHTSLSGVFNQAMVERVGANQFIAKFNPDELGAAV CCCCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHH KRAVEK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8169223; 9384377; 8169224 [H]