| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is cheR [H]
Identifier: 209695766
GI number: 209695766
Start: 2513665
End: 2514492
Strand: Reverse
Name: cheR [H]
Synonym: VSAL_I2339
Alternate gene names: 209695766
Gene position: 2514492-2513665 (Counterclockwise)
Preceding gene: 209695767
Following gene: 209695765
Centisome position: 75.62
GC content: 39.49
Gene sequence:
>828_bases ATGACAACTATAACTATCAACGAACAAGAATATCGTGATTTTAGCCGATTTCTTGAGTCTCAATGTGGCATTGTCCTTGG TGACAGCAAGCAATATTTAGTGAGAAGCCGACTGAGCCCTTTAGTTGCTAAGTTTTCATTAGCTTCATTATCCGATTTAT TAAAGCAAGTTATTGCTGGCAGAAATCGTGAATTGCGTGTTGCTGCTGTTGATGCAATGACAACGAATGAAACATTGTGG TTTAGAGACGGCTATCCGTTTACCGTATTGGCTGAAAAATTATTGCCAGAATTTGCTGCTAATCGTCGTCCATTGAAAAT TTGGTCAGCGGCGAGTTCGTCAGGCCAAGAAGCGTATTCAATGGGAATGATTATTTCTGAGATCCAAGCGCGTAAACCCG GTTTCTTACCTAATATCGCGATTACGGGGACTGACATTTCACCATCAATGCTTGATACGTGTAAAGCTGGGGTTTATGAC AATCTTGCGTTAAGCCGTGGGTTGTCACCAGAGCGTCGTCGTGCATTTTTTGAAGATGTGGGTGATGGTAAGATGAAGAT CAACGATAAAATTCAACGTATGGTTAATTTTCGTCCTCAAAATCTAATGGACAGTTACAGCTTACTTGGTAAGTTCGACA TCATTTTTTGTCGTAATGTATTGATCTATTTTTCTCCAGATATGAAAGCCAAAGTATTAAATCAAATGGCGGCAAGTCTT AACCCTGGCGGGTATTTATTGCTTGGTGCTTCGGAATCGTTAACAGGATTAACCGATAAATTTGAAATGGTACGTTGTAA TCCAGGTATTATTTACAAACTAAAATGA
Upstream 100 bases:
>100_bases CTGCTGTTAAAAGAGCAGTTGAGAAGTAGAGCCTGCCTGTTATTTTGTCACCTGTAAAGTAAGGTGACATTCATTTTATT ATTTGGAAATTTATTCGTTA
Downstream 100 bases:
>100_bases TCTAAATTGATTTATTTTTGAACAAAAAGCGGCTTTGGCCGCTTTTTTTGTGCCTCAAATTCAGGTTAGGCATGTTAATT GCTTTATTTTTTGTCAGTAG
Product: chemotaxis protein methyltransferase CheR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MTTITINEQEYRDFSRFLESQCGIVLGDSKQYLVRSRLSPLVAKFSLASLSDLLKQVIAGRNRELRVAAVDAMTTNETLW FRDGYPFTVLAEKLLPEFAANRRPLKIWSAASSSGQEAYSMGMIISEIQARKPGFLPNIAITGTDISPSMLDTCKAGVYD NLALSRGLSPERRRAFFEDVGDGKMKINDKIQRMVNFRPQNLMDSYSLLGKFDIIFCRNVLIYFSPDMKAKVLNQMAASL NPGGYLLLGASESLTGLTDKFEMVRCNPGIIYKLK
Sequences:
>Translated_275_residues MTTITINEQEYRDFSRFLESQCGIVLGDSKQYLVRSRLSPLVAKFSLASLSDLLKQVIAGRNRELRVAAVDAMTTNETLW FRDGYPFTVLAEKLLPEFAANRRPLKIWSAASSSGQEAYSMGMIISEIQARKPGFLPNIAITGTDISPSMLDTCKAGVYD NLALSRGLSPERRRAFFEDVGDGKMKINDKIQRMVNFRPQNLMDSYSLLGKFDIIFCRNVLIYFSPDMKAKVLNQMAASL NPGGYLLLGASESLTGLTDKFEMVRCNPGIIYKLK >Mature_274_residues TTITINEQEYRDFSRFLESQCGIVLGDSKQYLVRSRLSPLVAKFSLASLSDLLKQVIAGRNRELRVAAVDAMTTNETLWF RDGYPFTVLAEKLLPEFAANRRPLKIWSAASSSGQEAYSMGMIISEIQARKPGFLPNIAITGTDISPSMLDTCKAGVYDN LALSRGLSPERRRAFFEDVGDGKMKINDKIQRMVNFRPQNLMDSYSLLGKFDIIFCRNVLIYFSPDMKAKVLNQMAASLN PGGYLLLGASESLTGLTDKFEMVRCNPGIIYKLK
Specific function: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP [H]
COG id: COG1352
COG function: function code NT; Methylase of chemotaxis methyl-accepting proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheR-type methyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788193, Length=266, Percent_Identity=29.3233082706767, Blast_Score=132, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022642 - InterPro: IPR000780 - InterPro: IPR022641 [H]
Pfam domain/function: PF01739 CheR; PF03705 CheR_N [H]
EC number: =2.1.1.80 [H]
Molecular weight: Translated: 30770; Mature: 30639
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS50123 CHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTITINEQEYRDFSRFLESQCGIVLGDSKQYLVRSRLSPLVAKFSLASLSDLLKQVIAG CEEEEECHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RNRELRVAAVDAMTTNETLWFRDGYPFTVLAEKLLPEFAANRRPLKIWSAASSSGQEAYS CCCEEEEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH MGMIISEIQARKPGFLPNIAITGTDISPSMLDTCKAGVYDNLALSRGLSPERRRAFFEDV HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHC GDGKMKINDKIQRMVNFRPQNLMDSYSLLGKFDIIFCRNVLIYFSPDMKAKVLNQMAASL CCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCEEEEECCCHHHHHHHHHHHHC NPGGYLLLGASESLTGLTDKFEMVRCNPGIIYKLK CCCCEEEEECCCCCCCCCCCEEEEEECCCEEEEEC >Mature Secondary Structure TTITINEQEYRDFSRFLESQCGIVLGDSKQYLVRSRLSPLVAKFSLASLSDLLKQVIAG EEEEECHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RNRELRVAAVDAMTTNETLWFRDGYPFTVLAEKLLPEFAANRRPLKIWSAASSSGQEAYS CCCEEEEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH MGMIISEIQARKPGFLPNIAITGTDISPSMLDTCKAGVYDNLALSRGLSPERRRAFFEDV HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHC GDGKMKINDKIQRMVNFRPQNLMDSYSLLGKFDIIFCRNVLIYFSPDMKAKVLNQMAASL CCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCEEEEECCCHHHHHHHHHHHHC NPGGYLLLGASESLTGLTDKFEMVRCNPGIIYKLK CCCCEEEEECCCCCCCCCCCEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301; 10400589 [H]