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The map label for this gene is flgC [H]

Identifier: 209695764

GI number: 209695764

Start: 2512656

End: 2513072

Strand: Reverse

Name: flgC [H]

Synonym: VSAL_I2337

Alternate gene names: 209695764

Gene position: 2513072-2512656 (Counterclockwise)

Preceding gene: 209695765

Following gene: 209695763

Centisome position: 75.58

GC content: 41.01

Gene sequence:

>417_bases
ATGAGCTTATTTAATGTTTTTAACGTTGCAGGTTCTGCAATGAGTGCAGAGTCAGTTCGTCTCAACACCACTTCAAGTAA
CATGGCAAATGCGGACAGTGTCAGTAGCTCAGCTTCTGAAACCTACAAAGCTCGCCACGCTATCTTTGGTGCAGAATTGA
GTAAAGCTAAATATAAACAAGACTTTACAGTACCTGTAAAAGTGCTGGGTATTGTTGAAAGCCAAAAACCGCTACGTGCT
GAATATAACCCCGATCACCCTATGGCAAACGACGATGGTTATATTTTTAAACCAAACGTTAATGTGATGGAAGAAATGGC
AAACATGATTTCTGCTTCTCGTTCATACCAAACGAATGTGCAAGTTGCAGATGCAGGCAAACAAATGTTGCAGAGTACTC
TGCGAATGGGTCAATAA

Upstream 100 bases:

>100_bases
GTAATTTATTTATGCAAAACCAACTTCGTCATCAAGCATCATTAGAGTTTTTAGGCAGTAAATTCAAAAATCTCACCAAA
GCAATTAAAGGGGAATAGAG

Downstream 100 bases:

>100_bases
GGATAGGAGGTAGCTATGACTGGAATCAATAACGTTGGTCAACAAGGCTTGTCCTACATCGACCAGCTTAAAAGTCTTCA
AGAGGCGAACAAGCCTGAAA

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSLFNVFNVAGSAMSAESVRLNTTSSNMANADSVSSSASETYKARHAIFGAELSKAKYKQDFTVPVKVLGIVESQKPLRA
EYNPDHPMANDDGYIFKPNVNVMEEMANMISASRSYQTNVQVADAGKQMLQSTLRMGQ

Sequences:

>Translated_138_residues
MSLFNVFNVAGSAMSAESVRLNTTSSNMANADSVSSSASETYKARHAIFGAELSKAKYKQDFTVPVKVLGIVESQKPLRA
EYNPDHPMANDDGYIFKPNVNVMEEMANMISASRSYQTNVQVADAGKQMLQSTLRMGQ
>Mature_137_residues
SLFNVFNVAGSAMSAESVRLNTTSSNMANADSVSSSASETYKARHAIFGAELSKAKYKQDFTVPVKVLGIVESQKPLRAE
YNPDHPMANDDGYIFKPNVNVMEEMANMISASRSYQTNVQVADAGKQMLQSTLRMGQ

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=138, Percent_Identity=44.2028985507246, Blast_Score=121, Evalue=2e-29,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15064; Mature: 14933

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFNVFNVAGSAMSAESVRLNTTSSNMANADSVSSSASETYKARHAIFGAELSKAKYKQ
CCHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
DFTVPVKVLGIVESQKPLRAEYNPDHPMANDDGYIFKPNVNVMEEMANMISASRSYQTNV
CCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCE
QVADAGKQMLQSTLRMGQ
EEHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLFNVFNVAGSAMSAESVRLNTTSSNMANADSVSSSASETYKARHAIFGAELSKAKYKQ
CHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
DFTVPVKVLGIVESQKPLRAEYNPDHPMANDDGYIFKPNVNVMEEMANMISASRSYQTNV
CCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCE
QVADAGKQMLQSTLRMGQ
EEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]