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The map label for this gene is flgH [H]

Identifier: 209695759

GI number: 209695759

Start: 2507863

End: 2508648

Strand: Reverse

Name: flgH [H]

Synonym: VSAL_I2332

Alternate gene names: 209695759

Gene position: 2508648-2507863 (Counterclockwise)

Preceding gene: 209695760

Following gene: 209695758

Centisome position: 75.44

GC content: 42.49

Gene sequence:

>786_bases
ATGAAACGTCTTCTTTGTTTACTGCTATTAACAACCTTGACTGGGTGTGGATCTTTCTTGATTCAGAATCCAAATTTACA
AGAAAATGAAGTGACTTCAGCGACCACCAACGTGGATGCAGTTGAGGGTGACAAAGAAGAAGATACGGGCATTATCGATA
CGCTTCGTGGTCGTAGTGAGCCGATTTCAGGTGATCCAGCGTGGGCGCCGATTCATCCAAAAGAAAAACCAGAACATTAT
GCAGCCGCAACGGGCTCATTGTTTAATGTGGATCATGCACAAGACATGTACGATGACACCAAGCCACGTGGTTTAGGCGA
CATTGTTACCGTTATGCTTGCTGAAAATACCAAAGCGGCAAAAAGTGCCGATGCAGAATTATCAAAGAAAAATGATTCAA
GCATGGACCCTCTGCAAGTGGGTGGTCAAGAGTTGCAAGTGGGTGGGCAGTATAATTTCTCGTATGAGTTATCTAACGAT
AATAAATTTACAGGTAATACGTCTGCGAACCAAAGTAACAGCTTAAGTGGTTCCATTACGGTGGAAGTGATTGAAGTTCT
TTCTAATGGTAACTTATTGATCCGTGGAGAGAAGTGGTTAACTCTAAATACAGGGGATGAATACATTCGTCTTAGCGGCA
CGATTCGTCCGGATGACATTGCTTTTGATAACACAATAGCCTCAACCCGTATTTCAAACGCTCGAATTCAATATTCAGGC
ACGGGTGATCAACAAGATATGCAAGAACCTGGATTCTTGGCACGATTCTTTAATGTAGCACTATAA

Upstream 100 bases:

>100_bases
GATTGAAGCGCAACGTGTTTATGAAATGAACTCTAAAGTAATCTCTGCTGTTGATAAGATGGCAAGCTTTGTTAACCAAC
AATTATAATTGGTGATTAGG

Downstream 100 bases:

>100_bases
TAATGACGAATCGTTGGAGTTTTGACGTGAAGAAAAACCTAGTTACCTTAATTCTTACTTGGTTATGCCTAAGTATCTCT
ACTGCACAAGCGGCACGTAT

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKRLLCLLLLTTLTGCGSFLIQNPNLQENEVTSATTNVDAVEGDKEEDTGIIDTLRGRSEPISGDPAWAPIHPKEKPEHY
AAATGSLFNVDHAQDMYDDTKPRGLGDIVTVMLAENTKAAKSADAELSKKNDSSMDPLQVGGQELQVGGQYNFSYELSND
NKFTGNTSANQSNSLSGSITVEVIEVLSNGNLLIRGEKWLTLNTGDEYIRLSGTIRPDDIAFDNTIASTRISNARIQYSG
TGDQQDMQEPGFLARFFNVAL

Sequences:

>Translated_261_residues
MKRLLCLLLLTTLTGCGSFLIQNPNLQENEVTSATTNVDAVEGDKEEDTGIIDTLRGRSEPISGDPAWAPIHPKEKPEHY
AAATGSLFNVDHAQDMYDDTKPRGLGDIVTVMLAENTKAAKSADAELSKKNDSSMDPLQVGGQELQVGGQYNFSYELSND
NKFTGNTSANQSNSLSGSITVEVIEVLSNGNLLIRGEKWLTLNTGDEYIRLSGTIRPDDIAFDNTIASTRISNARIQYSG
TGDQQDMQEPGFLARFFNVAL
>Mature_261_residues
MKRLLCLLLLTTLTGCGSFLIQNPNLQENEVTSATTNVDAVEGDKEEDTGIIDTLRGRSEPISGDPAWAPIHPKEKPEHY
AAATGSLFNVDHAQDMYDDTKPRGLGDIVTVMLAENTKAAKSADAELSKKNDSSMDPLQVGGQELQVGGQYNFSYELSND
NKFTGNTSANQSNSLSGSITVEVIEVLSNGNLLIRGEKWLTLNTGDEYIRLSGTIRPDDIAFDNTIASTRISNARIQYSG
TGDQQDMQEPGFLARFFNVAL

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=204, Percent_Identity=36.2745098039216, Blast_Score=115, Evalue=3e-27,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 28353; Mature: 28353

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLCLLLLTTLTGCGSFLIQNPNLQENEVTSATTNVDAVEGDKEEDTGIIDTLRGRSE
CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC
PISGDPAWAPIHPKEKPEHYAAATGSLFNVDHAQDMYDDTKPRGLGDIVTVMLAENTKAA
CCCCCCCCCCCCCCCCCCHHHHCCCCEEECCCHHHHHHCCCCCCCCCEEEEEEECCCCHH
KSADAELSKKNDSSMDPLQVGGQELQVGGQYNFSYELSNDNKFTGNTSANQSNSLSGSIT
HCCCCHHHCCCCCCCCHHHCCCEEEEECCEEEEEEEECCCCEECCCCCCCCCCCCCCEEH
VEVIEVLSNGNLLIRGEKWLTLNTGDEYIRLSGTIRPDDIAFDNTIASTRISNARIQYSG
EEEEHHHHCCCEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCCHHHEEECCCEEEECC
TGDQQDMQEPGFLARFFNVAL
CCCHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MKRLLCLLLLTTLTGCGSFLIQNPNLQENEVTSATTNVDAVEGDKEEDTGIIDTLRGRSE
CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC
PISGDPAWAPIHPKEKPEHYAAATGSLFNVDHAQDMYDDTKPRGLGDIVTVMLAENTKAA
CCCCCCCCCCCCCCCCCCHHHHCCCCEEECCCHHHHHHCCCCCCCCCEEEEEEECCCCHH
KSADAELSKKNDSSMDPLQVGGQELQVGGQYNFSYELSNDNKFTGNTSANQSNSLSGSIT
HCCCCHHHCCCCCCCCHHHCCCEEEEECCEEEEEEEECCCCEECCCCCCCCCCCCCCEEH
VEVIEVLSNGNLLIRGEKWLTLNTGDEYIRLSGTIRPDDIAFDNTIASTRISNARIQYSG
EEEEHHHHCCCEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCCHHHEEECCCEEEECC
TGDQQDMQEPGFLARFFNVAL
CCCHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA