Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is flgI

Identifier: 209695758

GI number: 209695758

Start: 2506739

End: 2507860

Strand: Reverse

Name: flgI

Synonym: VSAL_I2331

Alternate gene names: 209695758

Gene position: 2507860-2506739 (Counterclockwise)

Preceding gene: 209695759

Following gene: 209695757

Centisome position: 75.42

GC content: 43.23

Gene sequence:

>1122_bases
ATGACGAATCGTTGGAGTTTTGACGTGAAGAAAAACCTAGTTACCTTAATTCTTACTTGGTTATGCCTAAGTATCTCTAC
TGCACAAGCGGCACGTATTAAAGACGTGTCAGAAGTTGCAGGAGTTCGTAGTAACCAATTAATCGGCTATGGTTTGGTTT
CTGGTTTACCGGGAACGGGCGAATCAACGCCATTTACCGATCAAAGTTTCAATGCCATGTTGCAAAACTTTGGTATTCAA
TTGCCACCAGGCACAAAACCAAAAACGAAAAACGTAGCAGCAGTAATGGTCACTACGACATTGCCAGCTTTTGCAAAGCA
AGGTCAAGTGGTCGATATTACGGTTTCATCTGTAGGTTCAGCAAAAAGCTTACGTGGTGGTACGTTATTACAGACCTTCT
TAAAAGGCTTGGATGGAAAAACATACGCCATTGCACAAGGTAATTTAATTGTGAGTGGTTTTAGTGCAACCGGTGCTGAT
GGTTCTAAAATTGTGGGTAATAACCCAACAGTCGGCCGTATTTCTGGTGGTGCAATGGTTGAGCGTGAAGTGCCGTCGCC
ATTCGGTCGTGGTGATTTCATTACTTTCAACTTATTAGATTCAGATTTTACAACCGCTCAACGTATGGCTGATGCGGTCA
ATAATTTCCTTGGCCCTAATATGGCTTCAGCGGTTGATGCGACTTCTGTTCGAGTTCGAGCTCCCCGAGATATTAGCCAA
CGAGTTGCATTTTTGTCTGCGGTAGAAAATGTTAACTTTGATCCAGCAGATGGCTCAGCAAAAATTATTGTGAATTCTCG
TACTGGTACGATTGTAGTTGGTAAGCACGTTAGATTAAGAGCGGCCGCAGTAACTCACGGTGGAATGACGGTAGCAATCA
AAGAAAACCAACAAGTGAGTCAACCGGGACCATTCGGTAATGGAAAAACGGTTGTAACACAAGATTCTGACATCGAAGTA
ACCGAAAAGCAGGGTAAGATGTTTAAATTTGAACCGGGCTTAACGTTGGATGATTTGGTTCGAGCGGTGAATGAGGTTGG
TGCAGCACCATCCGATTTAATGGCGATTCTTCAAGCGTTGAAACAAGCAGGCGCAATTGAAGGCCAACTGATCATTATTT
AA

Upstream 100 bases:

>100_bases
GTATTTCAAACGCTCGAATTCAATATTCAGGCACGGGTGATCAACAAGATATGCAAGAACCTGGATTCTTGGCACGATTC
TTTAATGTAGCACTATAATA

Downstream 100 bases:

>100_bases
GTTTGATTTCAATGATTCTAAAAACGCACTTTTTTGAGGTGCGTTTTTTTATGTTTGTTATTTACAAAATTAGCAGCACG
ACGACTTGGCATTAAACTTG

Product: flagellar basal body P-ring protein

Products: NA

Alternate protein names: Basal body P-ring protein

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MTNRWSFDVKKNLVTLILTWLCLSISTAQAARIKDVSEVAGVRSNQLIGYGLVSGLPGTGESTPFTDQSFNAMLQNFGIQ
LPPGTKPKTKNVAAVMVTTTLPAFAKQGQVVDITVSSVGSAKSLRGGTLLQTFLKGLDGKTYAIAQGNLIVSGFSATGAD
GSKIVGNNPTVGRISGGAMVEREVPSPFGRGDFITFNLLDSDFTTAQRMADAVNNFLGPNMASAVDATSVRVRAPRDISQ
RVAFLSAVENVNFDPADGSAKIIVNSRTGTIVVGKHVRLRAAAVTHGGMTVAIKENQQVSQPGPFGNGKTVVTQDSDIEV
TEKQGKMFKFEPGLTLDDLVRAVNEVGAAPSDLMAILQALKQAGAIEGQLIII

Sequences:

>Translated_373_residues
MTNRWSFDVKKNLVTLILTWLCLSISTAQAARIKDVSEVAGVRSNQLIGYGLVSGLPGTGESTPFTDQSFNAMLQNFGIQ
LPPGTKPKTKNVAAVMVTTTLPAFAKQGQVVDITVSSVGSAKSLRGGTLLQTFLKGLDGKTYAIAQGNLIVSGFSATGAD
GSKIVGNNPTVGRISGGAMVEREVPSPFGRGDFITFNLLDSDFTTAQRMADAVNNFLGPNMASAVDATSVRVRAPRDISQ
RVAFLSAVENVNFDPADGSAKIIVNSRTGTIVVGKHVRLRAAAVTHGGMTVAIKENQQVSQPGPFGNGKTVVTQDSDIEV
TEKQGKMFKFEPGLTLDDLVRAVNEVGAAPSDLMAILQALKQAGAIEGQLIII
>Mature_372_residues
TNRWSFDVKKNLVTLILTWLCLSISTAQAARIKDVSEVAGVRSNQLIGYGLVSGLPGTGESTPFTDQSFNAMLQNFGIQL
PPGTKPKTKNVAAVMVTTTLPAFAKQGQVVDITVSSVGSAKSLRGGTLLQTFLKGLDGKTYAIAQGNLIVSGFSATGADG
SKIVGNNPTVGRISGGAMVEREVPSPFGRGDFITFNLLDSDFTTAQRMADAVNNFLGPNMASAVDATSVRVRAPRDISQR
VAFLSAVENVNFDPADGSAKIIVNSRTGTIVVGKHVRLRAAAVTHGGMTVAIKENQQVSQPGPFGNGKTVVTQDSDIEVT
EKQGKMFKFEPGLTLDDLVRAVNEVGAAPSDLMAILQALKQAGAIEGQLIII

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation

COG id: COG1706

COG function: function code N; Flagellar basal-body P-ring protein

Gene ontology:

Cell location: Periplasm. Bacterial flagellum basal body (By similarity)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgI family

Homologues:

Organism=Escherichia coli, GI1787320, Length=359, Percent_Identity=46.7966573816156, Blast_Score=297, Evalue=6e-82,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGI_ALISL (B6EJG1)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002263688.1
- GeneID:   6988525
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I2331
- HOGENOM:   HBG321070
- OMA:   NRSDFTT
- ProtClustDB:   PRK05303
- HAMAP:   MF_00416
- InterPro:   IPR001782
- PRINTS:   PR01010

Pfam domain/function: PF02119 FlgI

EC number: NA

Molecular weight: Translated: 39195; Mature: 39064

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNRWSFDVKKNLVTLILTWLCLSISTAQAARIKDVSEVAGVRSNQLIGYGLVSGLPGTG
CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCC
ESTPFTDQSFNAMLQNFGIQLPPGTKPKTKNVAAVMVTTTLPAFAKQGQVVDITVSSVGS
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCHHHHHCCCEEEEEECCCCC
AKSLRGGTLLQTFLKGLDGKTYAIAQGNLIVSGFSATGADGSKIVGNNPTVGRISGGAMV
CCCCCCHHHHHHHHHHCCCCEEEEEECCEEEEECCCCCCCCCEEECCCCCEEEECCCEEE
EREVPSPFGRGDFITFNLLDSDFTTAQRMADAVNNFLGPNMASAVDATSVRVRAPRDISQ
EECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCHHH
RVAFLSAVENVNFDPADGSAKIIVNSRTGTIVVGKHVRLRAAAVTHGGMTVAIKENQQVS
HHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCCEEEEEEEEECCCEEEEEECCCCCC
QPGPFGNGKTVVTQDSDIEVTEKQGKMFKFEPGLTLDDLVRAVNEVGAAPSDLMAILQAL
CCCCCCCCCEEEECCCCCEEECCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
KQAGAIEGQLIII
HHCCCCCCEEEEC
>Mature Secondary Structure 
TNRWSFDVKKNLVTLILTWLCLSISTAQAARIKDVSEVAGVRSNQLIGYGLVSGLPGTG
CCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCC
ESTPFTDQSFNAMLQNFGIQLPPGTKPKTKNVAAVMVTTTLPAFAKQGQVVDITVSSVGS
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCHHHHHCCCEEEEEECCCCC
AKSLRGGTLLQTFLKGLDGKTYAIAQGNLIVSGFSATGADGSKIVGNNPTVGRISGGAMV
CCCCCCHHHHHHHHHHCCCCEEEEEECCEEEEECCCCCCCCCEEECCCCCEEEECCCEEE
EREVPSPFGRGDFITFNLLDSDFTTAQRMADAVNNFLGPNMASAVDATSVRVRAPRDISQ
EECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCHHH
RVAFLSAVENVNFDPADGSAKIIVNSRTGTIVVGKHVRLRAAAVTHGGMTVAIKENQQVS
HHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCCEEEEEEEEECCCEEEEEECCCCCC
QPGPFGNGKTVVTQDSDIEVTEKQGKMFKFEPGLTLDDLVRAVNEVGAAPSDLMAILQAL
CCCCCCCCCEEEECCCCCEEECCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
KQAGAIEGQLIII
HHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA