| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is flgI
Identifier: 209695758
GI number: 209695758
Start: 2506739
End: 2507860
Strand: Reverse
Name: flgI
Synonym: VSAL_I2331
Alternate gene names: 209695758
Gene position: 2507860-2506739 (Counterclockwise)
Preceding gene: 209695759
Following gene: 209695757
Centisome position: 75.42
GC content: 43.23
Gene sequence:
>1122_bases ATGACGAATCGTTGGAGTTTTGACGTGAAGAAAAACCTAGTTACCTTAATTCTTACTTGGTTATGCCTAAGTATCTCTAC TGCACAAGCGGCACGTATTAAAGACGTGTCAGAAGTTGCAGGAGTTCGTAGTAACCAATTAATCGGCTATGGTTTGGTTT CTGGTTTACCGGGAACGGGCGAATCAACGCCATTTACCGATCAAAGTTTCAATGCCATGTTGCAAAACTTTGGTATTCAA TTGCCACCAGGCACAAAACCAAAAACGAAAAACGTAGCAGCAGTAATGGTCACTACGACATTGCCAGCTTTTGCAAAGCA AGGTCAAGTGGTCGATATTACGGTTTCATCTGTAGGTTCAGCAAAAAGCTTACGTGGTGGTACGTTATTACAGACCTTCT TAAAAGGCTTGGATGGAAAAACATACGCCATTGCACAAGGTAATTTAATTGTGAGTGGTTTTAGTGCAACCGGTGCTGAT GGTTCTAAAATTGTGGGTAATAACCCAACAGTCGGCCGTATTTCTGGTGGTGCAATGGTTGAGCGTGAAGTGCCGTCGCC ATTCGGTCGTGGTGATTTCATTACTTTCAACTTATTAGATTCAGATTTTACAACCGCTCAACGTATGGCTGATGCGGTCA ATAATTTCCTTGGCCCTAATATGGCTTCAGCGGTTGATGCGACTTCTGTTCGAGTTCGAGCTCCCCGAGATATTAGCCAA CGAGTTGCATTTTTGTCTGCGGTAGAAAATGTTAACTTTGATCCAGCAGATGGCTCAGCAAAAATTATTGTGAATTCTCG TACTGGTACGATTGTAGTTGGTAAGCACGTTAGATTAAGAGCGGCCGCAGTAACTCACGGTGGAATGACGGTAGCAATCA AAGAAAACCAACAAGTGAGTCAACCGGGACCATTCGGTAATGGAAAAACGGTTGTAACACAAGATTCTGACATCGAAGTA ACCGAAAAGCAGGGTAAGATGTTTAAATTTGAACCGGGCTTAACGTTGGATGATTTGGTTCGAGCGGTGAATGAGGTTGG TGCAGCACCATCCGATTTAATGGCGATTCTTCAAGCGTTGAAACAAGCAGGCGCAATTGAAGGCCAACTGATCATTATTT AA
Upstream 100 bases:
>100_bases GTATTTCAAACGCTCGAATTCAATATTCAGGCACGGGTGATCAACAAGATATGCAAGAACCTGGATTCTTGGCACGATTC TTTAATGTAGCACTATAATA
Downstream 100 bases:
>100_bases GTTTGATTTCAATGATTCTAAAAACGCACTTTTTTGAGGTGCGTTTTTTTATGTTTGTTATTTACAAAATTAGCAGCACG ACGACTTGGCATTAAACTTG
Product: flagellar basal body P-ring protein
Products: NA
Alternate protein names: Basal body P-ring protein
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MTNRWSFDVKKNLVTLILTWLCLSISTAQAARIKDVSEVAGVRSNQLIGYGLVSGLPGTGESTPFTDQSFNAMLQNFGIQ LPPGTKPKTKNVAAVMVTTTLPAFAKQGQVVDITVSSVGSAKSLRGGTLLQTFLKGLDGKTYAIAQGNLIVSGFSATGAD GSKIVGNNPTVGRISGGAMVEREVPSPFGRGDFITFNLLDSDFTTAQRMADAVNNFLGPNMASAVDATSVRVRAPRDISQ RVAFLSAVENVNFDPADGSAKIIVNSRTGTIVVGKHVRLRAAAVTHGGMTVAIKENQQVSQPGPFGNGKTVVTQDSDIEV TEKQGKMFKFEPGLTLDDLVRAVNEVGAAPSDLMAILQALKQAGAIEGQLIII
Sequences:
>Translated_373_residues MTNRWSFDVKKNLVTLILTWLCLSISTAQAARIKDVSEVAGVRSNQLIGYGLVSGLPGTGESTPFTDQSFNAMLQNFGIQ LPPGTKPKTKNVAAVMVTTTLPAFAKQGQVVDITVSSVGSAKSLRGGTLLQTFLKGLDGKTYAIAQGNLIVSGFSATGAD GSKIVGNNPTVGRISGGAMVEREVPSPFGRGDFITFNLLDSDFTTAQRMADAVNNFLGPNMASAVDATSVRVRAPRDISQ RVAFLSAVENVNFDPADGSAKIIVNSRTGTIVVGKHVRLRAAAVTHGGMTVAIKENQQVSQPGPFGNGKTVVTQDSDIEV TEKQGKMFKFEPGLTLDDLVRAVNEVGAAPSDLMAILQALKQAGAIEGQLIII >Mature_372_residues TNRWSFDVKKNLVTLILTWLCLSISTAQAARIKDVSEVAGVRSNQLIGYGLVSGLPGTGESTPFTDQSFNAMLQNFGIQL PPGTKPKTKNVAAVMVTTTLPAFAKQGQVVDITVSSVGSAKSLRGGTLLQTFLKGLDGKTYAIAQGNLIVSGFSATGADG SKIVGNNPTVGRISGGAMVEREVPSPFGRGDFITFNLLDSDFTTAQRMADAVNNFLGPNMASAVDATSVRVRAPRDISQR VAFLSAVENVNFDPADGSAKIIVNSRTGTIVVGKHVRLRAAAVTHGGMTVAIKENQQVSQPGPFGNGKTVVTQDSDIEVT EKQGKMFKFEPGLTLDDLVRAVNEVGAAPSDLMAILQALKQAGAIEGQLIII
Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation
COG id: COG1706
COG function: function code N; Flagellar basal-body P-ring protein
Gene ontology:
Cell location: Periplasm. Bacterial flagellum basal body (By similarity)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgI family
Homologues:
Organism=Escherichia coli, GI1787320, Length=359, Percent_Identity=46.7966573816156, Blast_Score=297, Evalue=6e-82,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): FLGI_ALISL (B6EJG1)
Other databases:
- EMBL: FM178379 - RefSeq: YP_002263688.1 - GeneID: 6988525 - GenomeReviews: FM178379_GR - KEGG: vsa:VSAL_I2331 - HOGENOM: HBG321070 - OMA: NRSDFTT - ProtClustDB: PRK05303 - HAMAP: MF_00416 - InterPro: IPR001782 - PRINTS: PR01010
Pfam domain/function: PF02119 FlgI
EC number: NA
Molecular weight: Translated: 39195; Mature: 39064
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNRWSFDVKKNLVTLILTWLCLSISTAQAARIKDVSEVAGVRSNQLIGYGLVSGLPGTG CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCC ESTPFTDQSFNAMLQNFGIQLPPGTKPKTKNVAAVMVTTTLPAFAKQGQVVDITVSSVGS CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCHHHHHCCCEEEEEECCCCC AKSLRGGTLLQTFLKGLDGKTYAIAQGNLIVSGFSATGADGSKIVGNNPTVGRISGGAMV CCCCCCHHHHHHHHHHCCCCEEEEEECCEEEEECCCCCCCCCEEECCCCCEEEECCCEEE EREVPSPFGRGDFITFNLLDSDFTTAQRMADAVNNFLGPNMASAVDATSVRVRAPRDISQ EECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCHHH RVAFLSAVENVNFDPADGSAKIIVNSRTGTIVVGKHVRLRAAAVTHGGMTVAIKENQQVS HHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCCEEEEEEEEECCCEEEEEECCCCCC QPGPFGNGKTVVTQDSDIEVTEKQGKMFKFEPGLTLDDLVRAVNEVGAAPSDLMAILQAL CCCCCCCCCEEEECCCCCEEECCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHH KQAGAIEGQLIII HHCCCCCCEEEEC >Mature Secondary Structure TNRWSFDVKKNLVTLILTWLCLSISTAQAARIKDVSEVAGVRSNQLIGYGLVSGLPGTG CCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCC ESTPFTDQSFNAMLQNFGIQLPPGTKPKTKNVAAVMVTTTLPAFAKQGQVVDITVSSVGS CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCHHHHHCCCEEEEEECCCCC AKSLRGGTLLQTFLKGLDGKTYAIAQGNLIVSGFSATGADGSKIVGNNPTVGRISGGAMV CCCCCCHHHHHHHHHHCCCCEEEEEECCEEEEECCCCCCCCCEEECCCCCEEEECCCEEE EREVPSPFGRGDFITFNLLDSDFTTAQRMADAVNNFLGPNMASAVDATSVRVRAPRDISQ EECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCHHH RVAFLSAVENVNFDPADGSAKIIVNSRTGTIVVGKHVRLRAAAVTHGGMTVAIKENQQVS HHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCCEEEEEEEEECCCEEEEEECCCCCC QPGPFGNGKTVVTQDSDIEVTEKQGKMFKFEPGLTLDDLVRAVNEVGAAPSDLMAILQAL CCCCCCCCCEEEECCCCCEEECCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHH KQAGAIEGQLIII HHCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA