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The map label for this gene is flaA [H]

Identifier: 209695754

GI number: 209695754

Start: 2500546

End: 2501685

Strand: Reverse

Name: flaA [H]

Synonym: VSAL_I2327

Alternate gene names: 209695754

Gene position: 2501685-2500546 (Counterclockwise)

Preceding gene: 209695755

Following gene: 209695753

Centisome position: 75.23

GC content: 42.19

Gene sequence:

>1140_bases
ATGGCTGTAAATGTAAATACTAACGTAGCTGCGATGACTGCACAGCGTTACTTGAATAACGCAACAAATGATCTAAATAA
TTCAATGGAGCGTTTGTCTTCAGGTACTAAAATCAACAGCGCAAAAGATGACGCTGCTGGTCTACAAATTTCTAACCGTT
TAACAGCTCAGACTCGTGGTCTTGATGTTGCTATGCGTAATGCGAACGATGGTATTTCTATCGCTCAAACGGCTGAAGGT
GCGATGAATGAATCGACAAACATCCTTCAACGTATGCGTGACTTGTCATTGCAAGCGGCAAATGGTTCTAATTCAAACCA
AGATCGTTCTTCAATCCAAGAAGAAGTACACGCGCTATCTGATGAATTAAACCGTATCGCTGAAACAACGTCATTTGGTG
GTCGTCGACTACTTAATGGTCAGTTTGGTGAATCTGCATTCCAAATTGGTGCAAACTCAGGCGAAGCTATTCTTATTAAA
CTGCCATCTGTACGTTCTGACGACGACAGCATGGGCGGTCAGCGTTTTGTTTCTGAAAACGGAAAAACAGCTGAGTGGAA
CGTTGAAACGGGTAAAAACGACTTAAAACTTGAGTTTACTACGAAGAAAGGCGAAGCGGTTTCTATCAATATCAATGCTA
AAGCAGGCGATGACATTGAAGAGCTAGCAACGTACATCAATGGTCAATCAGACAAGATCTCTGCGTCTGTTGGTGATGAA
GGTAAACTGCAACTGTTTGTTGCTGAACCATCAATTGAAGGTGAATTAGCGGTTTCTGGTAATCTTGCTTCAGAGCTAGG
TTTAGCTGGCGGCGTTGGTACTAAAGCAACGGTTGATAAACTGGACGTAACGTCTGTTGGTGATGCACAAGTGTCTATCG
GTGTTATCGATTCAGCGCTTGCTTACATTGACCGTGAACGTGCTGATTTAGGTGCGAAACAAAACCGTCTAGGTCACAGC
ATCAACAACTTGTCTAACATTCAAGAGAATGTGTCTGCTTCTAACAGCCGAATCAAAGATACTGATTTTGCTAAAGAAAC
AACAAACATGACAAAAGCACAAATCCTTCAGCAGTCTAGTACGTCTATTCTTGCTCAAGCGAAACAGTTACCAAACGCTG
CACTAAAATTACTGCAGTAA

Upstream 100 bases:

>100_bases
AATCATTGGCCAATTGTGGCTAATATTAACTATGAATTTTAAATATTTCTGAATAGAGCAGAAATTGATTTCGTGAAAAC
GAAGCCGAAGGAGAGCAACC

Downstream 100 bases:

>100_bases
TAGTAACGAACAACAGTCATTAAGATTGAACAAGAGGTGCTCTCATCTCTCATCAACCTCTTGTTCAACTGATTGTTGGC
AAGCTTTAGGTAACTGGTTT

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MAVNVNTNVAAMTAQRYLNNATNDLNNSMERLSSGTKINSAKDDAAGLQISNRLTAQTRGLDVAMRNANDGISIAQTAEG
AMNESTNILQRMRDLSLQAANGSNSNQDRSSIQEEVHALSDELNRIAETTSFGGRRLLNGQFGESAFQIGANSGEAILIK
LPSVRSDDDSMGGQRFVSENGKTAEWNVETGKNDLKLEFTTKKGEAVSININAKAGDDIEELATYINGQSDKISASVGDE
GKLQLFVAEPSIEGELAVSGNLASELGLAGGVGTKATVDKLDVTSVGDAQVSIGVIDSALAYIDRERADLGAKQNRLGHS
INNLSNIQENVSASNSRIKDTDFAKETTNMTKAQILQQSSTSILAQAKQLPNAALKLLQ

Sequences:

>Translated_379_residues
MAVNVNTNVAAMTAQRYLNNATNDLNNSMERLSSGTKINSAKDDAAGLQISNRLTAQTRGLDVAMRNANDGISIAQTAEG
AMNESTNILQRMRDLSLQAANGSNSNQDRSSIQEEVHALSDELNRIAETTSFGGRRLLNGQFGESAFQIGANSGEAILIK
LPSVRSDDDSMGGQRFVSENGKTAEWNVETGKNDLKLEFTTKKGEAVSININAKAGDDIEELATYINGQSDKISASVGDE
GKLQLFVAEPSIEGELAVSGNLASELGLAGGVGTKATVDKLDVTSVGDAQVSIGVIDSALAYIDRERADLGAKQNRLGHS
INNLSNIQENVSASNSRIKDTDFAKETTNMTKAQILQQSSTSILAQAKQLPNAALKLLQ
>Mature_378_residues
AVNVNTNVAAMTAQRYLNNATNDLNNSMERLSSGTKINSAKDDAAGLQISNRLTAQTRGLDVAMRNANDGISIAQTAEGA
MNESTNILQRMRDLSLQAANGSNSNQDRSSIQEEVHALSDELNRIAETTSFGGRRLLNGQFGESAFQIGANSGEAILIKL
PSVRSDDDSMGGQRFVSENGKTAEWNVETGKNDLKLEFTTKKGEAVSININAKAGDDIEELATYINGQSDKISASVGDEG
KLQLFVAEPSIEGELAVSGNLASELGLAGGVGTKATVDKLDVTSVGDAQVSIGVIDSALAYIDRERADLGAKQNRLGHSI
NNLSNIQENVSASNSRIKDTDFAKETTNMTKAQILQQSSTSILAQAKQLPNAALKLLQ

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. FlaA is essential for flagellar synthesis and full motility. Important for virulence at two different levels:is needed for crossing the fish integument and may

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=214, Percent_Identity=42.5233644859813, Blast_Score=144, Evalue=7e-36,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029
- InterPro:   IPR010810 [H]

Pfam domain/function: PF00700 Flagellin_C; PF07196 Flagellin_IN; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 40194; Mature: 40063

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVNVNTNVAAMTAQRYLNNATNDLNNSMERLSSGTKINSAKDDAAGLQISNRLTAQTRG
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHCC
LDVAMRNANDGISIAQTAEGAMNESTNILQRMRDLSLQAANGSNSNQDRSSIQEEVHALS
CEEEEECCCCCCEEHHHHCCCCCHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHH
DELNRIAETTSFGGRRLLNGQFGESAFQIGANSGEAILIKLPSVRSDDDSMGGQRFVSEN
HHHHHHHHHHCCCCCEECCCCCCCHHEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHCC
GKTAEWNVETGKNDLKLEFTTKKGEAVSININAKAGDDIEELATYINGQSDKISASVGDE
CCEEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCC
GKLQLFVAEPSIEGELAVSGNLASELGLAGGVGTKATVDKLDVTSVGDAQVSIGVIDSAL
CEEEEEEECCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHH
AYIDRERADLGAKQNRLGHSINNLSNIQENVSASNSRIKDTDFAKETTNMTKAQILQQSS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TSILAQAKQLPNAALKLLQ
HHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure 
AVNVNTNVAAMTAQRYLNNATNDLNNSMERLSSGTKINSAKDDAAGLQISNRLTAQTRG
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHCC
LDVAMRNANDGISIAQTAEGAMNESTNILQRMRDLSLQAANGSNSNQDRSSIQEEVHALS
CEEEEECCCCCCEEHHHHCCCCCHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHH
DELNRIAETTSFGGRRLLNGQFGESAFQIGANSGEAILIKLPSVRSDDDSMGGQRFVSEN
HHHHHHHHHHCCCCCEECCCCCCCHHEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHCC
GKTAEWNVETGKNDLKLEFTTKKGEAVSININAKAGDDIEELATYINGQSDKISASVGDE
CCEEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCC
GKLQLFVAEPSIEGELAVSGNLASELGLAGGVGTKATVDKLDVTSVGDAQVSIGVIDSAL
CEEEEEEECCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHH
AYIDRERADLGAKQNRLGHSINNLSNIQENVSASNSRIKDTDFAKETTNMTKAQILQQSS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TSILAQAKQLPNAALKLLQ
HHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8631707 [H]