| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is fliL
Identifier: 209695734
GI number: 209695734
Start: 2474430
End: 2474915
Strand: Reverse
Name: fliL
Synonym: VSAL_I2302
Alternate gene names: NA
Gene position: 2474915-2474430 (Counterclockwise)
Preceding gene: 209695735
Following gene: 209695733
Centisome position: 74.43
GC content: 40.74
Gene sequence:
>486_bases ATGGCTGAGCAGGGTGACGCACCTAAAAGCAAAAATAAGATGATGTTTGTCATCGCACTACTTGTTTTATTGCTAGTAGT GGGAGGCGTTGGTGCTTGGTTCTTTATGTCTGGAGAGAGTAAACCAGAACCAACAGAGCATGATATCGCGGCGTTAGAAG CAAAAATGCCAGCATTGTATTTAAACTTGCCACAGCCTTTTATTTTCAATGTGGCAGGTGATAAACGAGATCGTCTTGTA CAATTAAAAGTGCAAGTAATGATGCGCGGTAGTGATAATGAAGCAATAGCAAAACAGCACACGCCATTAGTAGAAAGTAC GTTATTATCGACTTTTGCTGCGGCAACGGTTGAGCAATTAAGAGAGCCTCGTGGTCGAATCGAACTTCGTGAACAGGCAA CGCGTGATATTCAAGATGCCTTTACTAAAATTACAGCGAAACCTGTAATTGAAAAAGTATTATTTACTGACTTTGTAATG CAATAG
Upstream 100 bases:
>100_bases TCAAGTATCGAAACCTAAAGATGGTATTAGCTTTTACGCTTAATCGTGCATCAACGGATTTTTAAAATAATAATTAACGG TTTATTCAAGAGGAAAGACA
Downstream 100 bases:
>100_bases GTTCAATGTGACAGATCTATTATCCCAAGATGAAATTGATGCTCTACTTCATGGTGTAGATGACGTAGAAGATGATGTAG TCGGTGCTGATGACAGCTCA
Product: flagellar basal body-associated protein FliL
Products: NA
Alternate protein names: Flagellar Protein FliL; Flagellar Biosynthesis Protein FliL; Flagellar Basal Body-Associated Protein FliL-Like Protein
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MAEQGDAPKSKNKMMFVIALLVLLLVVGGVGAWFFMSGESKPEPTEHDIAALEAKMPALYLNLPQPFIFNVAGDKRDRLV QLKVQVMMRGSDNEAIAKQHTPLVESTLLSTFAAATVEQLREPRGRIELREQATRDIQDAFTKITAKPVIEKVLFTDFVM Q
Sequences:
>Translated_161_residues MAEQGDAPKSKNKMMFVIALLVLLLVVGGVGAWFFMSGESKPEPTEHDIAALEAKMPALYLNLPQPFIFNVAGDKRDRLV QLKVQVMMRGSDNEAIAKQHTPLVESTLLSTFAAATVEQLREPRGRIELREQATRDIQDAFTKITAKPVIEKVLFTDFVM Q >Mature_160_residues AEQGDAPKSKNKMMFVIALLVLLLVVGGVGAWFFMSGESKPEPTEHDIAALEAKMPALYLNLPQPFIFNVAGDKRDRLVQ LKVQVMMRGSDNEAIAKQHTPLVESTLLSTFAAATVEQLREPRGRIELREQATRDIQDAFTKITAKPVIEKVLFTDFVMQ
Specific function: Unknown
COG id: COG1580
COG function: function code N; Flagellar basal body-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17943; Mature: 17812
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQGDAPKSKNKMMFVIALLVLLLVVGGVGAWFFMSGESKPEPTEHDIAALEAKMPALY CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCHHHHHHHHHHCCEEE LNLPQPFIFNVAGDKRDRLVQLKVQVMMRGSDNEAIAKQHTPLVESTLLSTFAAATVEQL EECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHH REPRGRIELREQATRDIQDAFTKITAKPVIEKVLFTDFVMQ HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AEQGDAPKSKNKMMFVIALLVLLLVVGGVGAWFFMSGESKPEPTEHDIAALEAKMPALY CCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCHHHHHHHHHHCCEEE LNLPQPFIFNVAGDKRDRLVQLKVQVMMRGSDNEAIAKQHTPLVESTLLSTFAAATVEQL EECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHH REPRGRIELREQATRDIQDAFTKITAKPVIEKVLFTDFVMQ HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA