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The map label for this gene is fliM [H]

Identifier: 209695733

GI number: 209695733

Start: 2473391

End: 2474422

Strand: Reverse

Name: fliM [H]

Synonym: VSAL_I2301

Alternate gene names: 209695733

Gene position: 2474422-2473391 (Counterclockwise)

Preceding gene: 209695734

Following gene: 209695732

Centisome position: 74.42

GC content: 41.57

Gene sequence:

>1032_bases
GTGACAGATCTATTATCCCAAGATGAAATTGATGCTCTACTTCATGGTGTAGATGACGTAGAAGATGATGTAGTCGGTGC
TGATGACAGCTCAGGCACGATGAAGAGTTTTGACTTTTCATCGCAAGACAGAATCGTTCGTGGTCGAATGCCAACACTGG
AGTTGATCAATGAACGTTTCGCTCGTCATATGCGTATTAGCTTATTTAATATGCTGAGAAAAACCGCGGAAGTGTCGATT
AACGGCGTTTCAATGGTTAAATTTGGTGAGTATCAAAATACACTTTATGTACCGACAAGTCTGAATATGGTGCGTTTTCG
TCCATTGAAAGGCACGGCATTAGTTACGATGGAAGCGCGTTTGGTTTTCATTTTAGTTGAAAACTTCTTTGGTGGTGATG
GACGTTTCCACGCTAAGATCGAAGGTCGTGAATTTACACCGACTGAGCGTCGAATCATTCAGCTATTGTTGAAAGTTGTT
TTTGAAGATTACAAAGAAGCATGGTCTCCTGTCATGGGGGTTGAATTTGAATACCTAGATTCAGAAGTTAACCCAACCAT
GGCAAACATTGTAAGCCCGACAGAAGTTATCGTCGTAAGCTCATTCCATATTGAAGTTGACGGTGGCGGTGGTGATTTCC
ATGTCGTGTTCCCATACTCAATGGTTGAACCGATACGCGAACTACTTGATGCTGGTGTTCAAAGTGACAAGATGGACACC
GATGTTCGATGGAGTAAAGCGTTACGTGATGAAATCATGGACGTTCCTGTTGAAATGAAAGTGAATTTATTAGAAAGCGA
AATCTCATTACGCGATCTAATGGACCTTCAAGCGGGTGATATTATTCCAATTGAAATGCCAGAAGCCGCAACCGTGTTTG
TCGAAGATTTACCGACGTATCGCGGTAAAGTAGGTAAATCTGGTGATAAATTAGCAGTACAGATCACAGAGAAAATCAAG
CGCCCAGACATGGTCAAAACGGATCTTGCCTTCTTAGGTAAAAACGTTTTATTTGATTTAGATGACGAATAA

Upstream 100 bases:

>100_bases
CAGGCAACGCGTGATATTCAAGATGCCTTTACTAAAATTACAGCGAAACCTGTAATTGAAAAAGTATTATTTACTGACTT
TGTAATGCAATAGGTTCAAT

Downstream 100 bases:

>100_bases
GAAATAGAGAAGGTAGTGGATCATGGATTCAAATGAGCAACAAATGGCTGACGAATGGGCAGCAGCATTAAGTGAAAGTG
CAGAAGCAGTAAGTGCACCT

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MTDLLSQDEIDALLHGVDDVEDDVVGADDSSGTMKSFDFSSQDRIVRGRMPTLELINERFARHMRISLFNMLRKTAEVSI
NGVSMVKFGEYQNTLYVPTSLNMVRFRPLKGTALVTMEARLVFILVENFFGGDGRFHAKIEGREFTPTERRIIQLLLKVV
FEDYKEAWSPVMGVEFEYLDSEVNPTMANIVSPTEVIVVSSFHIEVDGGGGDFHVVFPYSMVEPIRELLDAGVQSDKMDT
DVRWSKALRDEIMDVPVEMKVNLLESEISLRDLMDLQAGDIIPIEMPEAATVFVEDLPTYRGKVGKSGDKLAVQITEKIK
RPDMVKTDLAFLGKNVLFDLDDE

Sequences:

>Translated_343_residues
MTDLLSQDEIDALLHGVDDVEDDVVGADDSSGTMKSFDFSSQDRIVRGRMPTLELINERFARHMRISLFNMLRKTAEVSI
NGVSMVKFGEYQNTLYVPTSLNMVRFRPLKGTALVTMEARLVFILVENFFGGDGRFHAKIEGREFTPTERRIIQLLLKVV
FEDYKEAWSPVMGVEFEYLDSEVNPTMANIVSPTEVIVVSSFHIEVDGGGGDFHVVFPYSMVEPIRELLDAGVQSDKMDT
DVRWSKALRDEIMDVPVEMKVNLLESEISLRDLMDLQAGDIIPIEMPEAATVFVEDLPTYRGKVGKSGDKLAVQITEKIK
RPDMVKTDLAFLGKNVLFDLDDE
>Mature_342_residues
TDLLSQDEIDALLHGVDDVEDDVVGADDSSGTMKSFDFSSQDRIVRGRMPTLELINERFARHMRISLFNMLRKTAEVSIN
GVSMVKFGEYQNTLYVPTSLNMVRFRPLKGTALVTMEARLVFILVENFFGGDGRFHAKIEGREFTPTERRIIQLLLKVVF
EDYKEAWSPVMGVEFEYLDSEVNPTMANIVSPTEVIVVSSFHIEVDGGGGDFHVVFPYSMVEPIRELLDAGVQSDKMDTD
VRWSKALRDEIMDVPVEMKVNLLESEISLRDLMDLQAGDIIPIEMPEAATVFVEDLPTYRGKVGKSGDKLAVQITEKIKR
PDMVKTDLAFLGKNVLFDLDDE

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=318, Percent_Identity=37.7358490566038, Blast_Score=254, Evalue=7e-69,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 38702; Mature: 38571

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLLSQDEIDALLHGVDDVEDDVVGADDSSGTMKSFDFSSQDRIVRGRMPTLELINERF
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEECCCCHHHHHHHHH
ARHMRISLFNMLRKTAEVSINGVSMVKFGEYQNTLYVPTSLNMVRFRPLKGTALVTMEAR
HHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCEEEECCCCCEEEEECCCCCEEEEEEEE
LVFILVENFFGGDGRFHAKIEGREFTPTERRIIQLLLKVVFEDYKEAWSPVMGVEFEYLD
EEEEEEEHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCC
SEVNPTMANIVSPTEVIVVSSFHIEVDGGGGDFHVVFPYSMVEPIRELLDAGVQSDKMDT
CCCCCHHHHHCCCCEEEEEEEEEEEEECCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCC
DVRWSKALRDEIMDVPVEMKVNLLESEISLRDLMDLQAGDIIPIEMPEAATVFVEDLPTY
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEHHCCCH
RGKVGKSGDKLAVQITEKIKRPDMVKTDLAFLGKNVLFDLDDE
HCCCCCCCCEEEEEEHHHHCCCCCHHHHHHHHCCCEEEECCCC
>Mature Secondary Structure 
TDLLSQDEIDALLHGVDDVEDDVVGADDSSGTMKSFDFSSQDRIVRGRMPTLELINERF
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEECCCCHHHHHHHHH
ARHMRISLFNMLRKTAEVSINGVSMVKFGEYQNTLYVPTSLNMVRFRPLKGTALVTMEAR
HHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCEEEECCCCCEEEEECCCCCEEEEEEEE
LVFILVENFFGGDGRFHAKIEGREFTPTERRIIQLLLKVVFEDYKEAWSPVMGVEFEYLD
EEEEEEEHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCC
SEVNPTMANIVSPTEVIVVSSFHIEVDGGGGDFHVVFPYSMVEPIRELLDAGVQSDKMDT
CCCCCHHHHHCCCCEEEEEEEEEEEEECCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCC
DVRWSKALRDEIMDVPVEMKVNLLESEISLRDLMDLQAGDIIPIEMPEAATVFVEDLPTY
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEHHCCCH
RGKVGKSGDKLAVQITEKIKRPDMVKTDLAFLGKNVLFDLDDE
HCCCCCCCCEEEEEEHHHHCCCCCHHHHHHHHCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]