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The map label for this gene is flhF [H]

Identifier: 209695724

GI number: 209695724

Start: 2464834

End: 2466288

Strand: Reverse

Name: flhF [H]

Synonym: VSAL_I2292

Alternate gene names: 209695724

Gene position: 2466288-2464834 (Counterclockwise)

Preceding gene: 209695725

Following gene: 209695723

Centisome position: 74.17

GC content: 41.24

Gene sequence:

>1455_bases
ATGCGCTCAGCTCTAGTTCAAGTAAAAGAAGAACTGGGTGTTGACGCCGTCATTATGTCAAATAAAAAAGTCACTGGCGG
TATTGAAATCGTAGCGGCAATCGATCCTAACGGTAGTTCAACGTCGTCTGCTGCGCCTGTACGTCGTGAAATTGAAGATG
ACAGAGTGAATGTAGGCAATAACAATAAAGGCTCTATGACGCGTCGCTTTGCTAATATGATAAAGCAATATGGTTCAAAT
TCAGGGGCTCCTGCTGAACCTGAAAAGACAGAGCAACGTGAAGAAGACAGTTTAGCGGCTTTGCTTCAGCGTCAATCTAA
GTTTCAACATCAATCAGTATCATCAAAGCCTGCAACACACTCAAGACCTAAATTAGATACGTCTGAAATGACTCGTGCGA
TTCAAAGTAATCCAAACTTAGCGCACCTTATTTCGGATAATCCAATGAATGATCGTCCTGAGAGAATGCAGCCTAAATTA
GATCCTTCTCGTTATGAGAAAGGAAGACGATCAAATCAAGAATCGAATGAAGATTTAGAAGGCATGCGTTCTGAAATGTC
GTCTATTCGTCGTTTGTTAGAACATCAAGTGTCAGGATTAATGTGGCAAGAAGTCGAGCGTAGAGAGCCACTTCGAGCAA
TGTTAATTAAACGTTTAGAGAAAATGGGTTTATCTGAAGAATTAGCGGATCAATTAGCGTGTTATATTCCTGAAGATACC
GAACCTAAAGACGCATGGGCATCATTACTAAAATTGTTAGCAGAGCAAATTCCAACCACTAAAGTCGATACATTGGCTCG
TGGTGGTATTGTTGCTTTGCTTGGTCCTACTGGGGTTGGTAAAACAACAACAATCGCAAAATTAGCAGCAAGAGCTGCAA
TGGAATATGGACCAGATCAAGTTGCCTTAGTTACGACGGACACTTTCCGTATTGGGGCACAAGAACAATTGGCTATTTAT
GGCCGAATCATGGGTTGCCCAGTTCGAATTGCAAAAGATGCCGATGAACTTGCAACCGTCTTATATCAATTACGCAATCG
CCGTTTAATTTTGGTAGATACTGCGGGTATGGGTCAACGTGATGTTCGATTAACAGAGCAATTAGACACATTAATGGAGC
ATAGTGGCTCACAAATAAATAGTTATTTAGTTATGCCAGCAACGGCACAACGCCGAGTGCTACAAGAGACGATCGATCAC
TTTAAACGTATCCCATTGTCTGGGTGTATTTTAAGTAAGATTGATGAGTCATTGAGCTTAGGTGAGTTAATTAGTGTAAC
CATCGAAAATGGGTTACCGATCTCTTATATTGCTAATGGTCAGCGCGTACCTGAAGATATCGTACTTGCTCAACCTAAAT
ACCTAGTAGCTAAAGCAAATGAATTACTAGAAAAAGCGACGGAAAAGGACCCTCATTTCTGGAATAGCGACATGCCAGAG
GCAAATAATTTATGA

Upstream 100 bases:

>100_bases
GAAGCAAATTAGAATAGTTCAAGCCGTTGGTCATTAATCGCGTCGACTTATTTAACGCAGGAATACGAAATTGAAAATTA
AACGATTTTTTGCAAAAGAT

Downstream 100 bases:

>100_bases
TTGATAATAATATATACGATCAGGCTAGTGGATTACGACGACTGACCAAACCTACGTTGACCAAAGTGGTTGCCGTAACG
GGTGGTAAAGGCGGCGTAGG

Product: flagellar biosynthesis regulator FlhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MRSALVQVKEELGVDAVIMSNKKVTGGIEIVAAIDPNGSSTSSAAPVRREIEDDRVNVGNNNKGSMTRRFANMIKQYGSN
SGAPAEPEKTEQREEDSLAALLQRQSKFQHQSVSSKPATHSRPKLDTSEMTRAIQSNPNLAHLISDNPMNDRPERMQPKL
DPSRYEKGRRSNQESNEDLEGMRSEMSSIRRLLEHQVSGLMWQEVERREPLRAMLIKRLEKMGLSEELADQLACYIPEDT
EPKDAWASLLKLLAEQIPTTKVDTLARGGIVALLGPTGVGKTTTIAKLAARAAMEYGPDQVALVTTDTFRIGAQEQLAIY
GRIMGCPVRIAKDADELATVLYQLRNRRLILVDTAGMGQRDVRLTEQLDTLMEHSGSQINSYLVMPATAQRRVLQETIDH
FKRIPLSGCILSKIDESLSLGELISVTIENGLPISYIANGQRVPEDIVLAQPKYLVAKANELLEKATEKDPHFWNSDMPE
ANNL

Sequences:

>Translated_484_residues
MRSALVQVKEELGVDAVIMSNKKVTGGIEIVAAIDPNGSSTSSAAPVRREIEDDRVNVGNNNKGSMTRRFANMIKQYGSN
SGAPAEPEKTEQREEDSLAALLQRQSKFQHQSVSSKPATHSRPKLDTSEMTRAIQSNPNLAHLISDNPMNDRPERMQPKL
DPSRYEKGRRSNQESNEDLEGMRSEMSSIRRLLEHQVSGLMWQEVERREPLRAMLIKRLEKMGLSEELADQLACYIPEDT
EPKDAWASLLKLLAEQIPTTKVDTLARGGIVALLGPTGVGKTTTIAKLAARAAMEYGPDQVALVTTDTFRIGAQEQLAIY
GRIMGCPVRIAKDADELATVLYQLRNRRLILVDTAGMGQRDVRLTEQLDTLMEHSGSQINSYLVMPATAQRRVLQETIDH
FKRIPLSGCILSKIDESLSLGELISVTIENGLPISYIANGQRVPEDIVLAQPKYLVAKANELLEKATEKDPHFWNSDMPE
ANNL
>Mature_484_residues
MRSALVQVKEELGVDAVIMSNKKVTGGIEIVAAIDPNGSSTSSAAPVRREIEDDRVNVGNNNKGSMTRRFANMIKQYGSN
SGAPAEPEKTEQREEDSLAALLQRQSKFQHQSVSSKPATHSRPKLDTSEMTRAIQSNPNLAHLISDNPMNDRPERMQPKL
DPSRYEKGRRSNQESNEDLEGMRSEMSSIRRLLEHQVSGLMWQEVERREPLRAMLIKRLEKMGLSEELADQLACYIPEDT
EPKDAWASLLKLLAEQIPTTKVDTLARGGIVALLGPTGVGKTTTIAKLAARAAMEYGPDQVALVTTDTFRIGAQEQLAIY
GRIMGCPVRIAKDADELATVLYQLRNRRLILVDTAGMGQRDVRLTEQLDTLMEHSGSQINSYLVMPATAQRRVLQETIDH
FKRIPLSGCILSKIDESLSLGELISVTIENGLPISYIANGQRVPEDIVLAQPKYLVAKANELLEKATEKDPHFWNSDMPE
ANNL

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Escherichia coli, GI1789874, Length=190, Percent_Identity=31.5789473684211, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 53717; Mature: 53717

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSALVQVKEELGVDAVIMSNKKVTGGIEIVAAIDPNGSSTSSAAPVRREIEDDRVNVGN
CCHHHHHHHHHCCCCEEEECCCEECCCEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCC
NNKGSMTRRFANMIKQYGSNSGAPAEPEKTEQREEDSLAALLQRQSKFQHQSVSSKPATH
CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SRPKLDTSEMTRAIQSNPNLAHLISDNPMNDRPERMQPKLDPSRYEKGRRSNQESNEDLE
CCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCHHHH
GMRSEMSSIRRLLEHQVSGLMWQEVERREPLRAMLIKRLEKMGLSEELADQLACYIPEDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHEEECCCCC
EPKDAWASLLKLLAEQIPTTKVDTLARGGIVALLGPTGVGKTTTIAKLAARAAMEYGPDQ
CHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCC
VALVTTDTFRIGAQEQLAIYGRIMGCPVRIAKDADELATVLYQLRNRRLILVDTAGMGQR
EEEEEECCEECCCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCEEEEEECCCCCCH
DVRLTEQLDTLMEHSGSQINSYLVMPATAQRRVLQETIDHFKRIPLSGCILSKIDESLSL
HHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCH
GELISVTIENGLPISYIANGQRVPEDIVLAQPKYLVAKANELLEKATEKDPHFWNSDMPE
HHHHEEEECCCCCEEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
ANNL
CCCC
>Mature Secondary Structure
MRSALVQVKEELGVDAVIMSNKKVTGGIEIVAAIDPNGSSTSSAAPVRREIEDDRVNVGN
CCHHHHHHHHHCCCCEEEECCCEECCCEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCC
NNKGSMTRRFANMIKQYGSNSGAPAEPEKTEQREEDSLAALLQRQSKFQHQSVSSKPATH
CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SRPKLDTSEMTRAIQSNPNLAHLISDNPMNDRPERMQPKLDPSRYEKGRRSNQESNEDLE
CCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCHHHH
GMRSEMSSIRRLLEHQVSGLMWQEVERREPLRAMLIKRLEKMGLSEELADQLACYIPEDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHEEECCCCC
EPKDAWASLLKLLAEQIPTTKVDTLARGGIVALLGPTGVGKTTTIAKLAARAAMEYGPDQ
CHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCC
VALVTTDTFRIGAQEQLAIYGRIMGCPVRIAKDADELATVLYQLRNRRLILVDTAGMGQR
EEEEEECCEECCCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCEEEEEECCCCCCH
DVRLTEQLDTLMEHSGSQINSYLVMPATAQRRVLQETIDHFKRIPLSGCILSKIDESLSL
HHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCH
GELISVTIENGLPISYIANGQRVPEDIVLAQPKYLVAKANELLEKATEKDPHFWNSDMPE
HHHHEEEECCCCCEEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
ANNL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9503621 [H]