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The map label for this gene is soj [H]

Identifier: 209695717

GI number: 209695717

Start: 2457936

End: 2458703

Strand: Reverse

Name: soj [H]

Synonym: VSAL_I2285

Alternate gene names: 209695717

Gene position: 2458703-2457936 (Counterclockwise)

Preceding gene: 209695718

Following gene: 209695716

Centisome position: 73.94

GC content: 39.45

Gene sequence:

>768_bases
ATGATTGTCTGGAGCATAGCAAACCAGAAAGGTGGTGTGGGTAAAACAACCACAACAATTACACTGGCTGGTTTATTAAA
TGAACGTGGTAAACGAGTACTTATGGTGGACACCGATCCACACGGTTCGTTAACTACGTACTTAGGCTATGATTCAGACA
ATTTACCTTCTAGCTTATTTGGGTTATTTCAACTTCCAACGATAAATAAAACAACCGTGAAACCGTTTGTTTTACACAGC
AAGGTACCGGGCTTAGACATTATTCCTGCACATATGTCATTAGCGACACTTGATCGTGTGATGGGGAATCGAACCGGCAT
GGGATTGGTCCTTAAGCGTGTATTAAAAGCGCTTGAAGATGAATACGATTATGTACTTATTGATTGCCCACCGATCTTAG
GTGTCATGATGATTAATGCCTTAGCGGCCAGTAATCGTGTCTTAATTCCAGTTCAAACTGAGTTCTTAGCAATGAAAGGC
TTAGAACGTATGATGAAAACATTAGCCATCATGCAAAGAAATAAACCGTCTTTATTTGATGTTACGATCATTCCAACAAT
GTATGACAAACGAACGAATGCGTCGTTACAAACATTAATGGAACTGAAGCATATGTATACTGATCAAGTGTGGGCTTCAG
CCGTTCCTATTGATACAAAATTTAGAGATGCAAGTCTAAAAAGAATGCCACCGTCTTTTGTTTCTCCAAACAGCCGTGGT
GTTTTTGCCTATAAAACGTTGTTGAACTACTTGGAGCGATTAGTTTAA

Upstream 100 bases:

>100_bases
ACAAGCCGTCGATAAAGCCGGTTTGTCTTCAGAAAGTTTGCCGATAGAACGTGTCGCTGAACGAATGCTTGTTGAAGTTG
GATTAAAGTAGGAAAACCGA

Downstream 100 bases:

>100_bases
TGACGAGTTTCAAACCATTGACCAGTGAAGAAGCACTCGAAGATTACTTTTCAGCATTATTAAATGAAGAGGTTATTGAG
CTTGAAGATGATCAAGATAT

Product: chromosome segregation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MIVWSIANQKGGVGKTTTTITLAGLLNERGKRVLMVDTDPHGSLTTYLGYDSDNLPSSLFGLFQLPTINKTTVKPFVLHS
KVPGLDIIPAHMSLATLDRVMGNRTGMGLVLKRVLKALEDEYDYVLIDCPPILGVMMINALAASNRVLIPVQTEFLAMKG
LERMMKTLAIMQRNKPSLFDVTIIPTMYDKRTNASLQTLMELKHMYTDQVWASAVPIDTKFRDASLKRMPPSFVSPNSRG
VFAYKTLLNYLERLV

Sequences:

>Translated_255_residues
MIVWSIANQKGGVGKTTTTITLAGLLNERGKRVLMVDTDPHGSLTTYLGYDSDNLPSSLFGLFQLPTINKTTVKPFVLHS
KVPGLDIIPAHMSLATLDRVMGNRTGMGLVLKRVLKALEDEYDYVLIDCPPILGVMMINALAASNRVLIPVQTEFLAMKG
LERMMKTLAIMQRNKPSLFDVTIIPTMYDKRTNASLQTLMELKHMYTDQVWASAVPIDTKFRDASLKRMPPSFVSPNSRG
VFAYKTLLNYLERLV
>Mature_255_residues
MIVWSIANQKGGVGKTTTTITLAGLLNERGKRVLMVDTDPHGSLTTYLGYDSDNLPSSLFGLFQLPTINKTTVKPFVLHS
KVPGLDIIPAHMSLATLDRVMGNRTGMGLVLKRVLKALEDEYDYVLIDCPPILGVMMINALAASNRVLIPVQTEFLAMKG
LERMMKTLAIMQRNKPSLFDVTIIPTMYDKRTNASLQTLMELKHMYTDQVWASAVPIDTKFRDASLKRMPPSFVSPNSRG
VFAYKTLLNYLERLV

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28437; Mature: 28437

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVWSIANQKGGVGKTTTTITLAGLLNERGKRVLMVDTDPHGSLTTYLGYDSDNLPSSLF
CEEEEECCCCCCCCCCHHHEEHEEHHHHCCCEEEEEECCCCCCEEEEECCCCCCCCHHHH
GLFQLPTINKTTVKPFVLHSKVPGLDIIPAHMSLATLDRVMGNRTGMGLVLKRVLKALED
HHHCCCCCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
EYDYVLIDCPPILGVMMINALAASNRVLIPVQTEFLAMKGLERMMKTLAIMQRNKPSLFD
CCCEEEEECCHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VTIIPTMYDKRTNASLQTLMELKHMYTDQVWASAVPIDTKFRDASLKRMPPSFVSPNSRG
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCC
VFAYKTLLNYLERLV
CHHHHHHHHHHHHHC
>Mature Secondary Structure
MIVWSIANQKGGVGKTTTTITLAGLLNERGKRVLMVDTDPHGSLTTYLGYDSDNLPSSLF
CEEEEECCCCCCCCCCHHHEEHEEHHHHCCCEEEEEECCCCCCEEEEECCCCCCCCHHHH
GLFQLPTINKTTVKPFVLHSKVPGLDIIPAHMSLATLDRVMGNRTGMGLVLKRVLKALED
HHHCCCCCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
EYDYVLIDCPPILGVMMINALAASNRVLIPVQTEFLAMKGLERMMKTLAIMQRNKPSLFD
CCCEEEEECCHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VTIIPTMYDKRTNASLQTLMELKHMYTDQVWASAVPIDTKFRDASLKRMPPSFVSPNSRG
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCC
VFAYKTLLNYLERLV
CHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]