The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695691

Identifier: 209695691

GI number: 209695691

Start: 2425889

End: 2426470

Strand: Reverse

Name: 209695691

Synonym: VSAL_I2255

Alternate gene names: NA

Gene position: 2426470-2425889 (Counterclockwise)

Preceding gene: 209695698

Following gene: 209695690

Centisome position: 72.97

GC content: 37.11

Gene sequence:

>582_bases
ATGAATCGATTAACATTATTTACACTATTAGCTTTTACGCCACTTTCTGCCTTTTCTCAGATCTATATCACGCCTTCCAT
TGGCTACGCTTCTGGCGGTGAAGTTGAAACCGTTAATGATGACATTCTCGATTTAAAAGCAGATACCGCTTATTCATTAA
GTATTGAGACCGATTATGATTTAGGTCGAATTGGCTTATTTTATAGCAATCAAACCAATGATGTTGATGGTGTAAACCTC
AAATCAAAACTTCAATATTTGCATTTTCAAAGCGCTTTAGATTATCAATTAACACATAACCTAAGCTCTTTCTTAGGTTT
AAGTATTGGTACAACTTACTCTGATGTTGATTGGGTTGATGACAGTCTTCACTTTTCAGCAGGCGCATTTGCTGGTTTGC
AATACCATTTTACGGATCATTTTGCATTGCAGTTCGAGGGCCGTTGGTTAGGGACTTCTATGAATAGTAGTGTTGATAGC
ACCTGCGCTTCAAACTCAACAAGCAGCACTTGTGTAATAAAATACGAAAGTGATTGGGTGAACCAATTTCAAGCTAACGT
AGGCTTTCGTTTCAATTTCTAA

Upstream 100 bases:

>100_bases
TATGTTCAAGGAATAGACACAGTTAATCAATCAAGTTGGTATTAGAGTCACAATGTCAGCATAATAATCACTTCTATGAA
ATGGAATTCTAGGGGAACAC

Downstream 100 bases:

>100_bases
CAATTAAAAAAACACAATACTTCGACTATTAAGCATTTCATTTTCATTAATTTAAAATGAAATGCTTATTTTCCCATCAT
TTGGGCTTTTTTATAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MNRLTLFTLLAFTPLSAFSQIYITPSIGYASGGEVETVNDDILDLKADTAYSLSIETDYDLGRIGLFYSNQTNDVDGVNL
KSKLQYLHFQSALDYQLTHNLSSFLGLSIGTTYSDVDWVDDSLHFSAGAFAGLQYHFTDHFALQFEGRWLGTSMNSSVDS
TCASNSTSSTCVIKYESDWVNQFQANVGFRFNF

Sequences:

>Translated_193_residues
MNRLTLFTLLAFTPLSAFSQIYITPSIGYASGGEVETVNDDILDLKADTAYSLSIETDYDLGRIGLFYSNQTNDVDGVNL
KSKLQYLHFQSALDYQLTHNLSSFLGLSIGTTYSDVDWVDDSLHFSAGAFAGLQYHFTDHFALQFEGRWLGTSMNSSVDS
TCASNSTSSTCVIKYESDWVNQFQANVGFRFNF
>Mature_193_residues
MNRLTLFTLLAFTPLSAFSQIYITPSIGYASGGEVETVNDDILDLKADTAYSLSIETDYDLGRIGLFYSNQTNDVDGVNL
KSKLQYLHFQSALDYQLTHNLSSFLGLSIGTTYSDVDWVDDSLHFSAGAFAGLQYHFTDHFALQFEGRWLGTSMNSSVDS
TCASNSTSSTCVIKYESDWVNQFQANVGFRFNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21486; Mature: 21486

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLTLFTLLAFTPLSAFSQIYITPSIGYASGGEVETVNDDILDLKADTAYSLSIETDYD
CCCCEEEHHHHHCHHHHCEEEEEEECCCCCCCCCEEECCCCEEEEECCCEEEEEEECCCC
LGRIGLFYSNQTNDVDGVNLKSKLQYLHFQSALDYQLTHNLSSFLGLSIGTTYSDVDWVD
CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCHHHHHCEECCCCCCCCCCCC
DSLHFSAGAFAGLQYHFTDHFALQFEGRWLGTSMNSSVDSTCASNSTSSTCVIKYESDWV
CCCEECCCCEEEEEEEEECEEEEEECCEEECCCCCCCCCCHHCCCCCCCEEEEEECCHHH
NQFQANVGFRFNF
HHHHHCCCEEECC
>Mature Secondary Structure
MNRLTLFTLLAFTPLSAFSQIYITPSIGYASGGEVETVNDDILDLKADTAYSLSIETDYD
CCCCEEEHHHHHCHHHHCEEEEEEECCCCCCCCCEEECCCCEEEEECCCEEEEEEECCCC
LGRIGLFYSNQTNDVDGVNLKSKLQYLHFQSALDYQLTHNLSSFLGLSIGTTYSDVDWVD
CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCHHHHHCEECCCCCCCCCCCC
DSLHFSAGAFAGLQYHFTDHFALQFEGRWLGTSMNSSVDSTCASNSTSSTCVIKYESDWV
CCCEECCCCEEEEEEEEECEEEEEECCEEECCCCCCCCCCHHCCCCCCCEEEEEECCHHH
NQFQANVGFRFNF
HHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA