| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is rpsA
Identifier: 209695657
GI number:
Start: 2387396
End: 2389069
Strand: Direct
Name: rpsA
Synonym: VSAL_I2220
Alternate gene names: NA
Gene position: NA
Preceding gene: 209695656
Following gene: 209695658
Centisome position: NA
GC content: NA
Gene sequence:
>1674_bases ATGACTGAATCTTTTGCTCAACTCTTTGAAGAGTTTTTATCTGAAACTGAATTCCAACAAGGCAGCATCGTTAAAGGTGT TGTTGTTGCTATCGAGAACGGTTTCGTTCTTGTTGACGCAGGCCTTAAATCTGAAGCAGCAATCCCAGCTGAACAATTCA AGAACGCTGCTGGCGAACTTGAAGTTGAAGTTGGTTCTGAAGTAGACGTTGCTCTTGACGCTGTTGAAGATGGTTTCGGT GAAACTCAACTTTCTCGTGAGAAAGCGAAGCGTCACGAAGCTTGGATTCAACTTGAAAAAGCATATGAAGATGCTGAAAC AGTTATGGGTGTTATTAACGGTAAAGTTAAAGGCGGCTTCACAGTTGAACTTAACGGTATCCGTGCATTCCTACCTGGTT CTCTTGTTGATGTACGTCCAGTACGTGACACTCTGCACCTTGAAGGCAAAGAGCTAGAGTTCAAAGTAATCAAACTTGAC CAAAAGCGTAACAACGTTGTTGTTTCACGTCGTGCTGTTATCGAATCTGAAAACAGTGTTGAACGTGACGAGTTACTTGC TTCTCTACAAGAAGGCATGGAAGTTAAAGGTATCGTTAAGAACCTTACTGACTACGGTGCATTCGTTGATCTAGGTGGCG TTGACGGTCTACTACACATCACAGATATGGCTTGGAAGCGTGTTAAGCACCCATCTGAGATCGTAAATGTTGGTGACGAG ATCAATGTTAAAGTTCTTAAGTTCGATCGTGAGCGCACTCGTGTTTCTCTAGGTCTTAAGCAACTTGGCGAAGATCCATG GGTAGCTATCGCTAAGCGTTACCCAGAAGGTCACAAACTTTCTGGTCGTGTTACTAACCTAACTGATTACGGCTGCTTCG TTGAAATCGAAGAAGGCGTTGAAGGTCTAGTACACGTTTCTGAAATGGATTGGACTAACAAGAACATCCACCCTTCTAAA GTTGTCAATGTAGGCGACGAAGTTGAGGTTATGGTTCTTGAGATTGACGAAGAACGTCGTCGTATCTCTCTAGGTCTGAA ACAATGTAAAGCTAACCCTTGGCAGACATTCGCTGAAGCGCAAGCTAAAGGCGACCATGTTAGTGGTAAGATTAAATCTA TCACTGATTTCGGTATCTTCATCGGTCTTGACGGCGGCATCGACGGTCTAGTTCACCTTTCTGACATTTCTTGGAATGCT ACAGGTGAAGACGCGGTACGTGAGTACAAGAAAGGCGACGAAATCTCTGCTGTTGTTCTAGCTGTTGATGCTGAGCGTGA GCGTATTTCTCTAGGTGTTAAACAAATGGAAGAAGACCCATTTAACAACTACCTAGCAGACAACAAGAAAGGTACTCTAG TAAACGGTACTGTTTCAGCTGTTGACGCTAAAGGCGCTACAATTACTCTTGCAGATAGCGTAGAAGGTTACATCCGTACT TCTGAGCTTTCTCGTGACCGTATTGAAGATGCATCTCTAATCCTAAGCGTTGGCGATAGCGTTGAAGCGAAGTTCACTGG TGTAGACCGTAAGAACCGCGTAGTTAACCTATCTATCAAAGCTAAAGATGAAGCTGATGAGCAAGAAGCAATGGCGACAC TGAATACTAAACCAGAAGATGGTGGTTTCGGTAGCGCAATGGCTGACGCTTTCAAAGCAGCTAAAGGCGAATAA
Upstream 100 bases:
>100_bases ATAATTGAAACTTAGTTAGTTTCAAGGATGATAACTAACCTTACTATCAACCCCATGCGGTAGGATACCCATGGACGTTT AATAATTGAAGATCAAATTA
Downstream 100 bases:
>100_bases GTAAATTAGAAGGGAGCACTATGCTCCCTTTTCTTTCGATAACGTAGGAGAGGTCATTTATGACAAAATCTGAATTGATT GAACAACTGTGTAGTAAAAA
Product: 30S ribosomal protein S1
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>557_residues MTESFAQLFEEFLSETEFQQGSIVKGVVVAIENGFVLVDAGLKSEAAIPAEQFKNAAGELEVEVGSEVDVALDAVEDGFG ETQLSREKAKRHEAWIQLEKAYEDAETVMGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD QKRNNVVVSRRAVIESENSVERDELLASLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE INVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGHKLSGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK VVNVGDEVEVMVLEIDEERRRISLGLKQCKANPWQTFAEAQAKGDHVSGKIKSITDFGIFIGLDGGIDGLVHLSDISWNA TGEDAVREYKKGDEISAVVLAVDAERERISLGVKQMEEDPFNNYLADNKKGTLVNGTVSAVDAKGATITLADSVEGYIRT SELSRDRIEDASLILSVGDSVEAKFTGVDRKNRVVNLSIKAKDEADEQEAMATLNTKPEDGGFGSAMADAFKAAKGE
Sequences:
NA
Specific function: NA
COG id: COG0539
COG function: function code J; Ribosomal protein S1
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA