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The map label for this gene is ychK [C]

Identifier: 209695625

GI number: 209695625

Start: 2349981

End: 2350862

Strand: Direct

Name: ychK [C]

Synonym: VSAL_I2188

Alternate gene names: 209695625

Gene position: 2349981-2350862 (Clockwise)

Preceding gene: 209695624

Following gene: 209695631

Centisome position: 70.67

GC content: 40.7

Gene sequence:

>882_bases
ATGGGTAAAACAGTTTCTTTAGTATTAGGCAGTGGTGGTGCAAGAGGTCTTGCTCATATTGGCGTGATCCGTTGGTTAGA
GGAACATGATTTTACTATTGTTTCTGTTTCTGGTTGCTCGATTGGTACGGTTATTGGTGGCTTCTATGCTGCAGGAAAAC
TCGATGAGTTTGAAGCGTGGATGCGAACAGTGACAAAGTTAGATATTGTTTCTCTAATGGATTTTAATTGGGGTAAGGGC
GGCTTAATAAAAGGCGATAAAGTGATGAATCGTCTGGGTCATCTTTTAGGGGACTTAAATATTGAAGATTTGTCTATCCC
ATACACGGCAGTTGCGGCAGACATCAGTAATGAAAAAGAAGTGTGGTTACAAAAAGGGCCGCTTCTTCAAGCAATGCGGG
CTTCAATTTCATTGCCTCTGTATTTAATGCCAATTGAACTCAATGGCAGAACGTTAATTGATGGTGGGGTATTAAACCCT
GTCCCTATTGCCCCGACGTTTGGTGATCATTCTGATATTACATTAGCGGTGAATCTTGCGGGTGAAATGACACATCAAAT
TGACGACTTTGCCGATAAACAAATAGATATATCTGAGGCGGAATCTGAAGACGATATGTCTTTTCATCGTAAAGTGAGTG
ATTATTTTGGGTCATTAACAGCGAAAACATCAAGAATTGATTTAGGTATGTATGACATCGCAAATCAAGCGTTTGATGCA
ATGCAAAGTACGATAGCGAGACAGAAGTTAGCCGCTTATCCGCCCGATATTACGGTGGAAATAGCACGTGATGCGTGTGG
TACTTTTGAGTTTGAACGTACTGCGGAAATGATCGATTTAGGCTATCAAAAAACAGAAGAAGTACTAAAGCATTTGTTGT
AG

Upstream 100 bases:

>100_bases
GCCACAAGATTTACAACATACATTGGTCGCTCAATTTGCCGATATTACGTCAGAATAAGACGTTACTGATACAGAATTAA
CCTCATAAAGGAAGAGTGTA

Downstream 100 bases:

>100_bases
GTAATTTGAATAAAAAAACGCCCATTTCTTTATGATAGAAATGGGCGTTTTTTTGTCGCTCATTAAGTGAATAAATGAGT
TACACAGAAATAGTACTTAA

Product: phospholipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MGKTVSLVLGSGGARGLAHIGVIRWLEEHDFTIVSVSGCSIGTVIGGFYAAGKLDEFEAWMRTVTKLDIVSLMDFNWGKG
GLIKGDKVMNRLGHLLGDLNIEDLSIPYTAVAADISNEKEVWLQKGPLLQAMRASISLPLYLMPIELNGRTLIDGGVLNP
VPIAPTFGDHSDITLAVNLAGEMTHQIDDFADKQIDISEAESEDDMSFHRKVSDYFGSLTAKTSRIDLGMYDIANQAFDA
MQSTIARQKLAAYPPDITVEIARDACGTFEFERTAEMIDLGYQKTEEVLKHLL

Sequences:

>Translated_293_residues
MGKTVSLVLGSGGARGLAHIGVIRWLEEHDFTIVSVSGCSIGTVIGGFYAAGKLDEFEAWMRTVTKLDIVSLMDFNWGKG
GLIKGDKVMNRLGHLLGDLNIEDLSIPYTAVAADISNEKEVWLQKGPLLQAMRASISLPLYLMPIELNGRTLIDGGVLNP
VPIAPTFGDHSDITLAVNLAGEMTHQIDDFADKQIDISEAESEDDMSFHRKVSDYFGSLTAKTSRIDLGMYDIANQAFDA
MQSTIARQKLAAYPPDITVEIARDACGTFEFERTAEMIDLGYQKTEEVLKHLL
>Mature_292_residues
GKTVSLVLGSGGARGLAHIGVIRWLEEHDFTIVSVSGCSIGTVIGGFYAAGKLDEFEAWMRTVTKLDIVSLMDFNWGKGG
LIKGDKVMNRLGHLLGDLNIEDLSIPYTAVAADISNEKEVWLQKGPLLQAMRASISLPLYLMPIELNGRTLIDGGVLNPV
PIAPTFGDHSDITLAVNLAGEMTHQIDDFADKQIDISEAESEDDMSFHRKVSDYFGSLTAKTSRIDLGMYDIANQAFDAM
QSTIARQKLAAYPPDITVEIARDACGTFEFERTAEMIDLGYQKTEEVLKHLL

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656039, Length=185, Percent_Identity=33.5135135135135, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI260656041, Length=185, Percent_Identity=33.5135135135135, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI116256487, Length=185, Percent_Identity=33.5135135135135, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI260656043, Length=185, Percent_Identity=33.5135135135135, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI260656037, Length=185, Percent_Identity=33.5135135135135, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI148727335, Length=200, Percent_Identity=29, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI148727290, Length=200, Percent_Identity=29, Blast_Score=82, Evalue=6e-16,
Organism=Escherichia coli, GI226510936, Length=289, Percent_Identity=32.5259515570934, Blast_Score=186, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI71997299, Length=148, Percent_Identity=33.1081081081081, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71997289, Length=148, Percent_Identity=33.1081081081081, Blast_Score=68, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6323581, Length=171, Percent_Identity=31.5789473684211, Blast_Score=93, Evalue=6e-20,
Organism=Drosophila melanogaster, GI28571388, Length=168, Percent_Identity=31.547619047619, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281376913, Length=168, Percent_Identity=30.952380952381, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 32057; Mature: 31926

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKTVSLVLGSGGARGLAHIGVIRWLEEHDFTIVSVSGCSIGTVIGGFYAAGKLDEFEAW
CCCEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHH
MRTVTKLDIVSLMDFNWGKGGLIKGDKVMNRLGHLLGDLNIEDLSIPYTAVAADISNEKE
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHEEECCCCCHH
VWLQKGPLLQAMRASISLPLYLMPIELNGRTLIDGGVLNPVPIAPTFGDHSDITLAVNLA
HHHHCCCHHHHHHHHCCCCEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEC
GEMTHQIDDFADKQIDISEAESEDDMSFHRKVSDYFGSLTAKTSRIDLGMYDIANQAFDA
HHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHH
MQSTIARQKLAAYPPDITVEIARDACGTFEFERTAEMIDLGYQKTEEVLKHLL
HHHHHHHHHHHCCCCCCEEEEEHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHC
>Mature Secondary Structure 
GKTVSLVLGSGGARGLAHIGVIRWLEEHDFTIVSVSGCSIGTVIGGFYAAGKLDEFEAW
CCEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHH
MRTVTKLDIVSLMDFNWGKGGLIKGDKVMNRLGHLLGDLNIEDLSIPYTAVAADISNEKE
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHEEECCCCCHH
VWLQKGPLLQAMRASISLPLYLMPIELNGRTLIDGGVLNPVPIAPTFGDHSDITLAVNLA
HHHHCCCHHHHHHHHCCCCEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEC
GEMTHQIDDFADKQIDISEAESEDDMSFHRKVSDYFGSLTAKTSRIDLGMYDIANQAFDA
HHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHH
MQSTIARQKLAAYPPDITVEIARDACGTFEFERTAEMIDLGYQKTEEVLKHLL
HHHHHHHHHHHCCCCCCEEEEEHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]