| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is yfcL [H]
Identifier: 209695611
GI number: 209695611
Start: 2334084
End: 2334341
Strand: Direct
Name: yfcL [H]
Synonym: VSAL_I2172
Alternate gene names: 209695611
Gene position: 2334084-2334341 (Clockwise)
Preceding gene: 209695610
Following gene: 209695612
Centisome position: 70.19
GC content: 36.43
Gene sequence:
>258_bases ATGATCATTGAATTTGAAGAAAAACTGCTTGAATTAATTGATGCTCGTATTGAAACTGCATCAGATGATGAGTTATTTGC TGGTGGGTATTTACGTGGGCATATTTCCCTGTCAGTAGCGAAATGTGAAGAGCAGGGCGTTAGTGATCTTGATGTATTAA AACAGCATATTAATGACAGTTTAGAAGCCGCAAAATCTGAATTATCTCCAGCAGACAGAATCATTGTTGCTGATTTATGG GATCTTTTACGCAATTAA
Upstream 100 bases:
>100_bases GGTTTACCACCGCGAGTTGAGATGTTATCTACTGCGTTACGTGACTTTTACCAAACCGCCCCATTAACTAAAGAACAATT TATTGTCCAATAGGAAAGAA
Downstream 100 bases:
>100_bases CCTTAATTTATTAAGGTTAATCTTACGTACCCTACACAAACATTTATATCAATAACGTATAATTTACATAATTAAATTTT ATCTATTTTATACGTTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MIIEFEEKLLELIDARIETASDDELFAGGYLRGHISLSVAKCEEQGVSDLDVLKQHINDSLEAAKSELSPADRIIVADLW DLLRN
Sequences:
>Translated_85_residues MIIEFEEKLLELIDARIETASDDELFAGGYLRGHISLSVAKCEEQGVSDLDVLKQHINDSLEAAKSELSPADRIIVADLW DLLRN >Mature_85_residues MIIEFEEKLLELIDARIETASDDELFAGGYLRGHISLSVAKCEEQGVSDLDVLKQHINDSLEAAKSELSPADRIIVADLW DLLRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788665, Length=85, Percent_Identity=45.8823529411765, Blast_Score=76, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014987 [H]
Pfam domain/function: PF08891 YfcL [H]
EC number: NA
Molecular weight: Translated: 9497; Mature: 9497
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIEFEEKLLELIDARIETASDDELFAGGYLRGHISLSVAKCEEQGVSDLDVLKQHINDS CCCHHHHHHHHHHHHHHCCCCCCCEEECCEEEEHHHHHHHHHHHCCCCHHHHHHHHHCHH LEAAKSELSPADRIIVADLWDLLRN HHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MIIEFEEKLLELIDARIETASDDELFAGGYLRGHISLSVAKCEEQGVSDLDVLKQHINDS CCCHHHHHHHHHHHHHHCCCCCCCEEECCEEEEHHHHHHHHHHHCCCCHHHHHHHHHCHH LEAAKSELSPADRIIVADLWDLLRN HHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]