Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695567

Identifier: 209695567

GI number: 209695567

Start: 2274292

End: 2274684

Strand: Reverse

Name: 209695567

Synonym: VSAL_I2126

Alternate gene names: NA

Gene position: 2274684-2274292 (Counterclockwise)

Preceding gene: 209695571

Following gene: 209695566

Centisome position: 68.41

GC content: 44.53

Gene sequence:

>393_bases
ATGAATAAATTCAGTAAAATAAGTGCAACCCGATTGGCTTCTTGTCACCCTAAATTACAGAGCGTATTTACCGCCGTTCT
TGAGGTGTGTGATTGCTCTATTCTTTGTGGCCATCGAACCAAAGAAGAGCAAAACGCCCTGCCAAGTACAAATACCCAAG
TTCGATACCCAAACAGCAAACACAATTCATTACCAAGCAAGGCCGTCGATGCAACCCCGTACCCATACGATGAAGATGAT
CGTGAACGCTTCAGTTACTTTGCAGGCATTGTGATTGGTGTCGGTGCTTCAATGGGCGTGGCCATTCGTTGGGGCGGGGA
TTGGGACAAAGACAATGAGCTAAAAGACAATGGCTTTGATGACTTAATGCATTTTGAATTGATTGATGAGTAG

Upstream 100 bases:

>100_bases
AAACGAATAGATAAGATCGAATCAGACAAAATAGGGTTGGTTCGATTAATTTTTGGCCCAGTGATCGCCGTTGCGGTTGC
TGCTTTAAAGGTAATGTAAA

Downstream 100 bases:

>100_bases
GGAGTGAATGATGGGATTATTCAGTAAGATATTTGGTACCGATTCAGCCATCAAAGCAGGCATTGATTTAATCGCCAGTA
CAGGGGATGCGCTTGTGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: L-Alanyl-D-Glutamate Peptidase

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MNKFSKISATRLASCHPKLQSVFTAVLEVCDCSILCGHRTKEEQNALPSTNTQVRYPNSKHNSLPSKAVDATPYPYDEDD
RERFSYFAGIVIGVGASMGVAIRWGGDWDKDNELKDNGFDDLMHFELIDE

Sequences:

>Translated_130_residues
MNKFSKISATRLASCHPKLQSVFTAVLEVCDCSILCGHRTKEEQNALPSTNTQVRYPNSKHNSLPSKAVDATPYPYDEDD
RERFSYFAGIVIGVGASMGVAIRWGGDWDKDNELKDNGFDDLMHFELIDE
>Mature_130_residues
MNKFSKISATRLASCHPKLQSVFTAVLEVCDCSILCGHRTKEEQNALPSTNTQVRYPNSKHNSLPSKAVDATPYPYDEDD
RERFSYFAGIVIGVGASMGVAIRWGGDWDKDNELKDNGFDDLMHFELIDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14574; Mature: 14574

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFSKISATRLASCHPKLQSVFTAVLEVCDCSILCGHRTKEEQNALPSTNTQVRYPNSK
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHCCCCCCCCHHCCCCCCCCEEECCCCC
HNSLPSKAVDATPYPYDEDDRERFSYFAGIVIGVGASMGVAIRWGGDWDKDNELKDNGFD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC
DLMHFELIDE
HHHHHHCCCC
>Mature Secondary Structure
MNKFSKISATRLASCHPKLQSVFTAVLEVCDCSILCGHRTKEEQNALPSTNTQVRYPNSK
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHCCCCCCCCHHCCCCCCCCEEECCCCC
HNSLPSKAVDATPYPYDEDDRERFSYFAGIVIGVGASMGVAIRWGGDWDKDNELKDNGFD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC
DLMHFELIDE
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA