| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209695566
Identifier: 209695566
GI number: 209695566
Start: 2274021
End: 2274284
Strand: Reverse
Name: 209695566
Synonym: VSAL_I2125
Alternate gene names: NA
Gene position: 2274284-2274021 (Counterclockwise)
Preceding gene: 209695567
Following gene: 209695565
Centisome position: 68.4
GC content: 42.42
Gene sequence:
>264_bases ATGATGGGATTATTCAGTAAGATATTTGGTACCGATTCAGCCATCAAAGCAGGCATTGATTTAATCGCCAGTACAGGGGA TGCGCTTGTGTTCACCGATGAGGAGAAGTCGAAACAACACATTATGTTACTCAAAGCGTATGAGCCTTTTAAGCTCATTC AACGCTTTATTGTCATGGTCTTCTGTGTGCCTTACATTGGACTGCATACCATAGTGATCATAGGGTGTATTTTTGGTGCG GATTGGGGATCGATTAGTACCTAG
Upstream 100 bases:
>100_bases GCCATTCGTTGGGGCGGGGATTGGGACAAAGACAATGAGCTAAAAGACAATGGCTTTGATGACTTAATGCATTTTGAATT GATTGATGAGTAGGGAGTGA
Downstream 100 bases:
>100_bases GCGGAGGGGCAATTCCAAAACGTAAAAGCTGATTTTTTGCGCACAATACACCATATTTTTATACCGACAGTAGTTAATCT TAGTTTTGACGTCTATTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MMGLFSKIFGTDSAIKAGIDLIASTGDALVFTDEEKSKQHIMLLKAYEPFKLIQRFIVMVFCVPYIGLHTIVIIGCIFGA DWGSIST
Sequences:
>Translated_87_residues MMGLFSKIFGTDSAIKAGIDLIASTGDALVFTDEEKSKQHIMLLKAYEPFKLIQRFIVMVFCVPYIGLHTIVIIGCIFGA DWGSIST >Mature_87_residues MMGLFSKIFGTDSAIKAGIDLIASTGDALVFTDEEKSKQHIMLLKAYEPFKLIQRFIVMVFCVPYIGLHTIVIIGCIFGA DWGSIST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9575; Mature: 9575
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGLFSKIFGTDSAIKAGIDLIASTGDALVFTDEEKSKQHIMLLKAYEPFKLIQRFIVMV CCCHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHH FCVPYIGLHTIVIIGCIFGADWGSIST HHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MMGLFSKIFGTDSAIKAGIDLIASTGDALVFTDEEKSKQHIMLLKAYEPFKLIQRFIVMV CCCHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHH FCVPYIGLHTIVIIGCIFGADWGSIST HHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA